RNA–Protein interactions for RNA: ENST00000518198.1

DENND3-205, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 1,848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-205ENST00000518198 KRTAP5-9P26371 169 aa8.77□□□□□ -1.01
DENND3-205ENST00000518198 SYNE2Q8WXH0 6885 aaKnown RBP8.76□□□□□ -1.01
DENND3-205ENST00000518198 KRTAP19-3Q7Z4W3 81 aa8.71□□□□□ -1.01
DENND3-205ENST00000518198 KRTAP4-7Q9BYR0 210 aa8.64□□□□□ -1.03
DENND3-205ENST00000518198 MT1GP13640 62 aa8.64□□□□□ -1.03
DENND3-205ENST00000518198 KRTAP6-3Q3LI67 103 aa8.59□□□□□ -1.03
DENND3-205ENST00000518198 LCE5AQ5TCM9 118 aa8.57□□□□□ -1.04
DENND3-205ENST00000518198 MT1MQ8N339 61 aa8.54□□□□□ -1.04
DENND3-205ENST00000518198 LUZP6Q538Z0 58 aa8.53□□□□□ -1.04
DENND3-205ENST00000518198 LCE1AQ5T7P2 110 aa8.49□□□□□ -1.05
DENND3-205ENST00000518198 MDN1Q9NU22 5596 aa8.46□□□□□ -1.05
DENND3-205ENST00000518198 SPRR2EP22531 72 aa8.4□□□□□ -1.07
DENND3-205ENST00000518198 SPRR2BP35325 72 aa8.4□□□□□ -1.07
DENND3-205ENST00000518198 SPRR2AP35326 72 aa8.4□□□□□ -1.07
DENND3-205ENST00000518198 KRTAP4-3Q9BYR4 195 aa8.4□□□□□ -1.07
DENND3-205ENST00000518198 NDUFAF8A1L188 74 aa8.38□□□□□ -1.07
DENND3-205ENST00000518198 KRTAP9-6A8MVA2 160 aa8.36□□□□□ -1.07
DENND3-205ENST00000518198 KRTAP9-7A8MTY7 169 aa8.26□□□□□ -1.09
DENND3-205ENST00000518198 LOC100996750A0A140TA64 210 aa8.11□□□□□ -1.11
DENND3-205ENST00000518198 SPRR2DP22532 72 aa8.08□□□□□ -1.12
DENND3-205ENST00000518198 DSTQ03001 7570 aaKnown RBP8.07□□□□□ -1.12
DENND3-205ENST00000518198 NEBP20929 6669 aa7.91□□□□□ -1.14
DENND3-205ENST00000518198 H3BS24 57 aa7.77□□□□□ -1.17
DENND3-205ENST00000518198 LCE3BQ5TA77 95 aa7.77□□□□□ -1.17
DENND3-205ENST00000518198 KRTAP2-3P0C7H8 128 aa7.71□□□□□ -1.17
DENND3-205ENST00000518198 KRTAP2-4Q9BYR9 128 aa7.71□□□□□ -1.17
DENND3-205ENST00000518198 KRTAP2-1Q9BYU5 128 aa7.71□□□□□ -1.17
DENND3-205ENST00000518198 KRTAP5-5Q701N2 237 aaPredicted RBP7.71□□□□□ -1.18
DENND3-205ENST00000518198 MT1AP04731 61 aa7.55□□□□□ -1.2
DENND3-205ENST00000518198 KRTAP6-1Q3LI64 71 aa7.5□□□□□ -1.21
DENND3-205ENST00000518198 KRTAP5-4Q6L8H1 288 aa7.34□□□□□ -1.23
DENND3-205ENST00000518198 KRTAP2-2Q9BYT5 123 aa7.34□□□□□ -1.23
DENND3-205ENST00000518198 KRTAP20-1Q3LI63 56 aa7.33□□□□□ -1.24
DENND3-205ENST00000518198 A0A0A0MQY5 61 aa7.32□□□□□ -1.24
DENND3-205ENST00000518198 SYNE1Q8NF91 8797 aaKnown RBP7.26□□□□□ -1.25
DENND3-205ENST00000518198 KRTAP9-4Q9BYQ2 154 aa7.18□□□□□ -1.26
DENND3-205ENST00000518198 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
DENND3-205ENST00000518198 KRTAP12-4P60329 112 aa7.13□□□□□ -1.27
DENND3-205ENST00000518198 MT4P47944 62 aa7.03□□□□□ -1.28
DENND3-205ENST00000518198 KRTAP4-6Q9BYQ5 205 aa7□□□□□ -1.29
DENND3-205ENST00000518198 KRTAP4-9Q9BYQ8 210 aa6.96□□□□□ -1.3
DENND3-205ENST00000518198 LCE1DQ5T752 114 aa6.9□□□□□ -1.3
DENND3-205ENST00000518198 KRTAP6-2Q3LI66 62 aa6.9□□□□□ -1.31
DENND3-205ENST00000518198 INE1O15225 51 aa6.88□□□□□ -1.31
DENND3-205ENST00000518198 KRTAP20-2Q3LI61 65 aa6.85□□□□□ -1.31
DENND3-205ENST00000518198 MT3P25713 68 aa6.84□□□□□ -1.31
DENND3-205ENST00000518198 HMCN1Q96RW7 5635 aa6.81□□□□□ -1.32
DENND3-205ENST00000518198 KRTAP5-2Q701N4 177 aa6.66□□□□□ -1.34
DENND3-205ENST00000518198 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
DENND3-205ENST00000518198 LCE3DQ9BYE3 92 aa6.62□□□□□ -1.35
DENND3-205ENST00000518198 LCE3EQ5T5B0 92 aa6.43□□□□□ -1.38
DENND3-205ENST00000518198 OBSCNQ5VST9 7968 aa6.28□□□□□ -1.4
DENND3-205ENST00000518198 AHNAK2Q8IVF2 5795 aa5.99□□□□□ -1.45
DENND3-205ENST00000518198 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
DENND3-205ENST00000518198 LCE1EQ5T753 118 aa5.93□□□□□ -1.46
DENND3-205ENST00000518198 GPR98Q8WXG9 6306 aa5.8□□□□□ -1.48
DENND3-205ENST00000518198 KRTAP5-1Q6L8H4 278 aa5.76□□□□□ -1.49
DENND3-205ENST00000518198 KRTAP5-8O75690 187 aa5.71□□□□□ -1.49
DENND3-205ENST00000518198 KRTAP5-10Q6L8G5 202 aa5.7□□□□□ -1.5
DENND3-205ENST00000518198 KRTAP4-12Q9BQ66 201 aa5.64□□□□□ -1.51
DENND3-205ENST00000518198 PRM1P04553 51 aa5.62□□□□□ -1.51
DENND3-205ENST00000518198 LCE1BQ5T7P3 118 aa5.57□□□□□ -1.52
DENND3-205ENST00000518198 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
DENND3-205ENST00000518198 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
DENND3-205ENST00000518198 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
DENND3-205ENST00000518198 MUC5ACP98088 5654 aa5.53□□□□□ -1.52
DENND3-205ENST00000518198 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
DENND3-205ENST00000518198 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.18□□□□□ -1.58
DENND3-205ENST00000518198 KRTAP21-2Q3LI59 83 aa4.92□□□□□ -1.62
DENND3-205ENST00000518198 MUC5BQ9HC84 5762 aaPredicted RBP4.88□□□□□ -1.63
DENND3-205ENST00000518198 KRTAP5-11Q6L8G4 156 aa4.88□□□□□ -1.63
DENND3-205ENST00000518198 AHNAKQ09666 5890 aaKnown RBP4.51□□□□□ -1.69
DENND3-205ENST00000518198 LCE1FQ5T754 118 aa4.38□□□□□ -1.71
DENND3-205ENST00000518198 KRTAP4-4Q9BYR3 166 aa4.37□□□□□ -1.71
DENND3-205ENST00000518198 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
DENND3-205ENST00000518198 MUC19Q7Z5P9 8384 aa3.74□□□□□ -1.81
DENND3-205ENST00000518198 KRTAP21-1Q3LI58 79 aa3.44□□□□□ -1.86
DENND3-205ENST00000518198 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms