RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
CTNNA1-205ENST00000517904 SPINT4Q6UDR6 99 aa3.78□□□□□ -1.8
CTNNA1-205ENST00000517904 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
CTNNA1-205ENST00000517904 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
CTNNA1-205ENST00000517904 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
CTNNA1-205ENST00000517904 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
CTNNA1-205ENST00000517904 PCP4L1A6NKN8 68 aa3.71□□□□□ -1.82
CTNNA1-205ENST00000517904 AHNAKQ09666 5890 aaKnown RBP3.7□□□□□ -1.82
CTNNA1-205ENST00000517904 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.69□□□□□ -1.82
CTNNA1-205ENST00000517904 MUC5BQ9HC84 5762 aaPredicted RBP3.68□□□□□ -1.82
CTNNA1-205ENST00000517904 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CTNNA1-205ENST00000517904 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
CTNNA1-205ENST00000517904 TNP1P09430 55 aa3.63□□□□□ -1.83
CTNNA1-205ENST00000517904 SPANXA2-OT1Q8N9U9 137 aa3.63□□□□□ -1.83
CTNNA1-205ENST00000517904 A0A1B0GU33 70 aa3.62□□□□□ -1.83
CTNNA1-205ENST00000517904 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
CTNNA1-205ENST00000517904 SERP1Q9Y6X1 66 aa3.62□□□□□ -1.83
CTNNA1-205ENST00000517904 SEC61GP60059 68 aa3.61□□□□□ -1.83
CTNNA1-205ENST00000517904 SMIM20Q8N5G0 67 aa3.6□□□□□ -1.83
CTNNA1-205ENST00000517904 MT3P25713 68 aa3.58□□□□□ -1.84
CTNNA1-205ENST00000517904 COA5Q86WW8 74 aa3.57□□□□□ -1.84
CTNNA1-205ENST00000517904 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
CTNNA1-205ENST00000517904 A8MU10 97 aa3.54□□□□□ -1.84
CTNNA1-205ENST00000517904 J3QR89 54 aa3.54□□□□□ -1.84
CTNNA1-205ENST00000517904 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
CTNNA1-205ENST00000517904 SMIM26A0A096LP01 95 aa3.5□□□□□ -1.85
CTNNA1-205ENST00000517904 A0A1B0GV90 55 aa3.49□□□□□ -1.85
CTNNA1-205ENST00000517904 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
CTNNA1-205ENST00000517904 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
CTNNA1-205ENST00000517904 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CTNNA1-205ENST00000517904 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
CTNNA1-205ENST00000517904 MT1AP04731 61 aa3.39□□□□□ -1.87
CTNNA1-205ENST00000517904 SERP2Q8N6R1 65 aa3.39□□□□□ -1.87
CTNNA1-205ENST00000517904 A0A1B0GU69 56 aa3.38□□□□□ -1.87
CTNNA1-205ENST00000517904 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
CTNNA1-205ENST00000517904 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CTNNA1-205ENST00000517904 LCE3CQ5T5A8 94 aa3.3□□□□□ -1.88
CTNNA1-205ENST00000517904 KRTAP25-1Q3LHN0 102 aa3.27□□□□□ -1.89
CTNNA1-205ENST00000517904 H7BZZ5 65 aa3.24□□□□□ -1.89
CTNNA1-205ENST00000517904 K7ERU9 68 aa3.24□□□□□ -1.89
CTNNA1-205ENST00000517904 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CTNNA1-205ENST00000517904 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
CTNNA1-205ENST00000517904 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
CTNNA1-205ENST00000517904 COX7CP15954 63 aa3.17□□□□□ -1.9
CTNNA1-205ENST00000517904 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
CTNNA1-205ENST00000517904 NDUFAF8A1L188 74 aa3.12□□□□□ -1.91
CTNNA1-205ENST00000517904 UQCR11O14957 56 aa3.05□□□□□ -1.92
CTNNA1-205ENST00000517904 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
CTNNA1-205ENST00000517904 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
CTNNA1-205ENST00000517904 MIR22HGQ0VDD5 57 aa2.95□□□□□ -1.94
CTNNA1-205ENST00000517904 K7ERS5 55 aa2.92□□□□□ -1.94
CTNNA1-205ENST00000517904 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.95
CTNNA1-205ENST00000517904 ATP5EP56381 51 aaPredicted RBP2.86□□□□□ -1.95
CTNNA1-205ENST00000517904 CCDC179H3BU77 68 aa2.83□□□□□ -1.96
CTNNA1-205ENST00000517904 RPS28P62857 69 aaKnown RBP2.83□□□□□ -1.96
CTNNA1-205ENST00000517904 ANAPC13Q9BS18 74 aa2.83□□□□□ -1.96
CTNNA1-205ENST00000517904 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
CTNNA1-205ENST00000517904 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
CTNNA1-205ENST00000517904 LCE1CQ5T751 118 aa2.74□□□□□ -1.97
CTNNA1-205ENST00000517904 Q1T7F1 81 aa2.73□□□□□ -1.97
CTNNA1-205ENST00000517904 PSPHP1O15172 72 aa2.69□□□□□ -1.98
CTNNA1-205ENST00000517904 ROMO1P60602 79 aa2.69□□□□□ -1.98
CTNNA1-205ENST00000517904 TMEM258P61165 79 aa2.65□□□□□ -1.99
CTNNA1-205ENST00000517904 V9GYY9 64 aa2.57□□□□□ -2
CTNNA1-205ENST00000517904 A6NED7 52 aa2.55□□□□□ -2
CTNNA1-205ENST00000517904 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
CTNNA1-205ENST00000517904 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CTNNA1-205ENST00000517904 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
CTNNA1-205ENST00000517904 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
CTNNA1-205ENST00000517904 KRTAP21-1Q3LI58 79 aa1.86□□□□□ -2.11
CTNNA1-205ENST00000517904 PRO0628Q9UI54 55 aa1.76□□□□□ -2.13
CTNNA1-205ENST00000517904 BRK1Q8WUW1 75 aa1.72□□□□□ -2.13
CTNNA1-205ENST00000517904 LUZP6Q538Z0 58 aa1.67□□□□□ -2.14
CTNNA1-205ENST00000517904 PMAIP1Q13794 54 aa1.57□□□□□ -2.16
CTNNA1-205ENST00000517904 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
CTNNA1-205ENST00000517904 PRM1P04553 51 aa1.37□□□□□ -2.19
CTNNA1-205ENST00000517904 KTN1-AS1Q86SY8 53 aa1.29□□□□□ -2.2
CTNNA1-205ENST00000517904 INE1O15225 51 aa1.05□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 129.6 ms