RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-223ENST00000515854 KRTAP10-10P60014 251 aa1.98□□□□□ -2.09
ATP2C1-223ENST00000515854 ROMO1P60602 79 aa1.98□□□□□ -2.09
ATP2C1-223ENST00000515854 KRTAP19-8Q3LI54 63 aa1.94□□□□□ -2.1
ATP2C1-223ENST00000515854 CAMK2N1Q7Z7J9 78 aa1.93□□□□□ -2.1
ATP2C1-223ENST00000515854 C10orf95Q9H7T3 257 aa1.93□□□□□ -2.1
ATP2C1-223ENST00000515854 PLAC4Q8WY50 150 aa1.92□□□□□ -2.1
ATP2C1-223ENST00000515854 MT1BP07438 61 aa1.91□□□□□ -2.1
ATP2C1-223ENST00000515854 KRTAP25-1Q3LHN0 102 aa1.91□□□□□ -2.1
ATP2C1-223ENST00000515854 HMCN1Q96RW7 5635 aa1.9□□□□□ -2.1
ATP2C1-223ENST00000515854 KRTAP10-5P60370 271 aa1.9□□□□□ -2.11
ATP2C1-223ENST00000515854 LUZP6Q538Z0 58 aa1.87□□□□□ -2.11
ATP2C1-223ENST00000515854 TNP1P09430 55 aa1.85□□□□□ -2.11
ATP2C1-223ENST00000515854 MT1XP80297 61 aa1.85□□□□□ -2.11
ATP2C1-223ENST00000515854 KRTAP10-12P60413 245 aa1.83□□□□□ -2.12
ATP2C1-223ENST00000515854 LCE1FQ5T754 118 aa1.82□□□□□ -2.12
ATP2C1-223ENST00000515854 PP632Q6XCG6 107 aa1.82□□□□□ -2.12
ATP2C1-223ENST00000515854 USH2AO75445 5202 aa1.81□□□□□ -2.12
ATP2C1-223ENST00000515854 PRO2289Q9P1D8 64 aa1.81□□□□□ -2.12
ATP2C1-223ENST00000515854 LCE3AQ5TA76 89 aa1.77□□□□□ -2.13
ATP2C1-223ENST00000515854 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
ATP2C1-223ENST00000515854 KRTAP8-1Q8IUC2 63 aa1.75□□□□□ -2.13
ATP2C1-223ENST00000515854 SSPOA2VEC9 5147 aa1.75□□□□□ -2.13
ATP2C1-223ENST00000515854 KRTAP12-3P60328 96 aa1.69□□□□□ -2.14
ATP2C1-223ENST00000515854 FSIP2Q5CZC0 6907 aa1.68□□□□□ -2.14
ATP2C1-223ENST00000515854 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
ATP2C1-223ENST00000515854 SPRR5A0A1B0GTR4 108 aa1.65□□□□□ -2.15
ATP2C1-223ENST00000515854 KRTAP19-7Q3SYF9 63 aa1.65□□□□□ -2.15
ATP2C1-223ENST00000515854 LCE3CQ5T5A8 94 aa1.65□□□□□ -2.15
ATP2C1-223ENST00000515854 FCGBPQ9Y6R7 5405 aaPredicted RBP1.64□□□□□ -2.15
ATP2C1-223ENST00000515854 KMT2DO14686 5537 aa1.63□□□□□ -2.15
ATP2C1-223ENST00000515854 CRCT1Q9UGL9 99 aa1.63□□□□□ -2.15
ATP2C1-223ENST00000515854 MT1EP04732 61 aa1.62□□□□□ -2.15
ATP2C1-223ENST00000515854 MT1LQ93083 61 aa1.6□□□□□ -2.15
ATP2C1-223ENST00000515854 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.15
ATP2C1-223ENST00000515854 KRTAP19-3Q7Z4W3 81 aa1.55□□□□□ -2.16
ATP2C1-223ENST00000515854 MT1GP13640 62 aa1.54□□□□□ -2.16
ATP2C1-223ENST00000515854 LCE1CQ5T751 118 aa1.54□□□□□ -2.16
ATP2C1-223ENST00000515854 LCE1BQ5T7P3 118 aa1.54□□□□□ -2.16
ATP2C1-223ENST00000515854 SPRR2FQ96RM1 72 aa1.54□□□□□ -2.16
ATP2C1-223ENST00000515854 SYNE2Q8WXH0 6885 aaKnown RBP1.53□□□□□ -2.16
ATP2C1-223ENST00000515854 KRTAP5-5Q701N2 237 aaPredicted RBP1.53□□□□□ -2.16
ATP2C1-223ENST00000515854 MT1MQ8N339 61 aa1.52□□□□□ -2.17
ATP2C1-223ENST00000515854 KRTAP6-3Q3LI67 103 aa1.5□□□□□ -2.17
ATP2C1-223ENST00000515854 LCE3EQ5T5B0 92 aa1.5□□□□□ -2.17
ATP2C1-223ENST00000515854 MUC12Q9UKN1 5478 aa1.5□□□□□ -2.17
ATP2C1-223ENST00000515854 INE1O15225 51 aa1.48□□□□□ -2.17
ATP2C1-223ENST00000515854 SPRR2EP22531 72 aa1.46□□□□□ -2.18
ATP2C1-223ENST00000515854 SPRR2BP35325 72 aa1.46□□□□□ -2.18
ATP2C1-223ENST00000515854 SPRR2AP35326 72 aa1.46□□□□□ -2.18
ATP2C1-223ENST00000515854 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
ATP2C1-223ENST00000515854 MDN1Q9NU22 5596 aa1.42□□□□□ -2.18
ATP2C1-223ENST00000515854 KRTAP2-3P0C7H8 128 aa1.42□□□□□ -2.18
ATP2C1-223ENST00000515854 KRTAP2-4Q9BYR9 128 aa1.42□□□□□ -2.18
ATP2C1-223ENST00000515854 KRTAP2-1Q9BYU5 128 aa1.42□□□□□ -2.18
ATP2C1-223ENST00000515854 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.18
ATP2C1-223ENST00000515854 NEBP20929 6669 aa1.4□□□□□ -2.19
ATP2C1-223ENST00000515854 SPRR2DP22532 72 aa1.4□□□□□ -2.19
ATP2C1-223ENST00000515854 MT1AP04731 61 aa1.36□□□□□ -2.19
ATP2C1-223ENST00000515854 KRTAP6-1Q3LI64 71 aa1.34□□□□□ -2.19
ATP2C1-223ENST00000515854 SYNE1Q8NF91 8797 aaKnown RBP1.29□□□□□ -2.2
ATP2C1-223ENST00000515854 LCE3DQ9BYE3 92 aa1.29□□□□□ -2.2
ATP2C1-223ENST00000515854 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
ATP2C1-223ENST00000515854 KRTAP20-1Q3LI63 56 aa1.25□□□□□ -2.21
ATP2C1-223ENST00000515854 KRTAP6-2Q3LI66 62 aa1.22□□□□□ -2.21
ATP2C1-223ENST00000515854 MT4P47944 62 aa1.21□□□□□ -2.22
ATP2C1-223ENST00000515854 KRTAP20-2Q3LI61 65 aa1.2□□□□□ -2.22
ATP2C1-223ENST00000515854 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
ATP2C1-223ENST00000515854 GPR98Q8WXG9 6306 aa1.16□□□□□ -2.22
ATP2C1-223ENST00000515854 KRTAP21-2Q3LI59 83 aa1.16□□□□□ -2.22
ATP2C1-223ENST00000515854 PRM1P04553 51 aa1.03□□□□□ -2.24
ATP2C1-223ENST00000515854 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.25
ATP2C1-223ENST00000515854 KRTAP5-10Q6L8G5 202 aa1.01□□□□□ -2.25
ATP2C1-223ENST00000515854 MUC5ACP98088 5654 aa0.98□□□□□ -2.25
ATP2C1-223ENST00000515854 AHNAKQ09666 5890 aaKnown RBP0.92□□□□□ -2.26
ATP2C1-223ENST00000515854 MUC5BQ9HC84 5762 aaPredicted RBP0.9□□□□□ -2.27
ATP2C1-223ENST00000515854 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
ATP2C1-223ENST00000515854 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
ATP2C1-223ENST00000515854 MUC16Q8WXI7 14507 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 27.2 ms