RNA–Protein interactions for RNA: ENST00000515658.1

COL4A5-210, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-210ENST00000515658 KRTAP2-1Q9BYU5 128 aa3.77□□□□□ -1.81
COL4A5-210ENST00000515658 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
COL4A5-210ENST00000515658 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
COL4A5-210ENST00000515658 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
COL4A5-210ENST00000515658 CAMK2N1Q7Z7J9 78 aa3.75□□□□□ -1.81
COL4A5-210ENST00000515658 KRTAP5-2Q701N4 177 aa3.74□□□□□ -1.81
COL4A5-210ENST00000515658 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
COL4A5-210ENST00000515658 MT1EP04732 61 aa3.7□□□□□ -1.82
COL4A5-210ENST00000515658 A0A1B0GU33 70 aa3.69□□□□□ -1.82
COL4A5-210ENST00000515658 SPINT4Q6UDR6 99 aa3.69□□□□□ -1.82
COL4A5-210ENST00000515658 A8MU10 97 aa3.68□□□□□ -1.82
COL4A5-210ENST00000515658 KRTAP4-3Q9BYR4 195 aa3.67□□□□□ -1.82
COL4A5-210ENST00000515658 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
COL4A5-210ENST00000515658 CCDC179H3BU77 68 aa3.66□□□□□ -1.82
COL4A5-210ENST00000515658 DSTQ03001 7570 aaKnown RBP3.66□□□□□ -1.82
COL4A5-210ENST00000515658 SEC61GP60059 68 aa3.65□□□□□ -1.83
COL4A5-210ENST00000515658 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
COL4A5-210ENST00000515658 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
COL4A5-210ENST00000515658 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
COL4A5-210ENST00000515658 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
COL4A5-210ENST00000515658 A0A1B0GU69 56 aa3.59□□□□□ -1.83
COL4A5-210ENST00000515658 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
COL4A5-210ENST00000515658 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
COL4A5-210ENST00000515658 MT1LQ93083 61 aa3.53□□□□□ -1.84
COL4A5-210ENST00000515658 SMIM26A0A096LP01 95 aa3.52□□□□□ -1.85
COL4A5-210ENST00000515658 MT1MQ8N339 61 aa3.52□□□□□ -1.85
COL4A5-210ENST00000515658 MT1GP13640 62 aa3.5□□□□□ -1.85
COL4A5-210ENST00000515658 LINC01558Q9Y6Z2 57 aa3.47□□□□□ -1.85
COL4A5-210ENST00000515658 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
COL4A5-210ENST00000515658 TNP1P09430 55 aa3.43□□□□□ -1.86
COL4A5-210ENST00000515658 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
COL4A5-210ENST00000515658 MT4P47944 62 aa3.41□□□□□ -1.86
COL4A5-210ENST00000515658 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
COL4A5-210ENST00000515658 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
COL4A5-210ENST00000515658 PRR15LQ9BU68 103 aa3.39□□□□□ -1.87
COL4A5-210ENST00000515658 TMEM258P61165 79 aa3.38□□□□□ -1.87
COL4A5-210ENST00000515658 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
COL4A5-210ENST00000515658 UQCR11O14957 56 aa3.33□□□□□ -1.88
COL4A5-210ENST00000515658 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
COL4A5-210ENST00000515658 MIR22HGQ0VDD5 57 aa3.3□□□□□ -1.88
COL4A5-210ENST00000515658 PSPHP1O15172 72 aa3.29□□□□□ -1.88
COL4A5-210ENST00000515658 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
COL4A5-210ENST00000515658 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
COL4A5-210ENST00000515658 KRTAP5-8O75690 187 aa3.21□□□□□ -1.9
COL4A5-210ENST00000515658 Q1T7F1 81 aa3.2□□□□□ -1.9
COL4A5-210ENST00000515658 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
COL4A5-210ENST00000515658 SYNE1Q8NF91 8797 aaKnown RBP3.17□□□□□ -1.9
COL4A5-210ENST00000515658 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
COL4A5-210ENST00000515658 RPS28P62857 69 aaKnown RBP3.16□□□□□ -1.9
COL4A5-210ENST00000515658 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
COL4A5-210ENST00000515658 V9GYY9 64 aa3.12□□□□□ -1.91
COL4A5-210ENST00000515658 K7ERS5 55 aa3.11□□□□□ -1.91
COL4A5-210ENST00000515658 A6NED7 52 aa3.1□□□□□ -1.91
COL4A5-210ENST00000515658 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
COL4A5-210ENST00000515658 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
COL4A5-210ENST00000515658 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
COL4A5-210ENST00000515658 ROMO1P60602 79 aa3.01□□□□□ -1.93
COL4A5-210ENST00000515658 CDC42SE1Q9NRR8 79 aa3.01□□□□□ -1.93
COL4A5-210ENST00000515658 MT1AP04731 61 aa2.97□□□□□ -1.93
COL4A5-210ENST00000515658 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
COL4A5-210ENST00000515658 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
COL4A5-210ENST00000515658 PRO0628Q9UI54 55 aa2.83□□□□□ -1.96
COL4A5-210ENST00000515658 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
COL4A5-210ENST00000515658 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
COL4A5-210ENST00000515658 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
COL4A5-210ENST00000515658 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
COL4A5-210ENST00000515658 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
COL4A5-210ENST00000515658 MUC5ACP98088 5654 aa2.71□□□□□ -1.98
COL4A5-210ENST00000515658 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
COL4A5-210ENST00000515658 PMAIP1Q13794 54 aa2.57□□□□□ -2
COL4A5-210ENST00000515658 KTN1-AS1Q86SY8 53 aa2.43□□□□□ -2.02
COL4A5-210ENST00000515658 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
COL4A5-210ENST00000515658 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
COL4A5-210ENST00000515658 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
COL4A5-210ENST00000515658 PRM1P04553 51 aa1.59□□□□□ -2.15
COL4A5-210ENST00000515658 INE1O15225 51 aa1.51□□□□□ -2.17
COL4A5-210ENST00000515658 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
COL4A5-210ENST00000515658 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms