RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 TNP1P09430 55 aa6.21□□□□□ -1.42
SPOP-220ENST00000515508 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
SPOP-220ENST00000515508 KRTAP4-7Q9BYR0 210 aa6.16□□□□□ -1.42
SPOP-220ENST00000515508 A8MU10 97 aa6.15□□□□□ -1.42
SPOP-220ENST00000515508 KRTAP20-2Q3LI61 65 aa6.15□□□□□ -1.42
SPOP-220ENST00000515508 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
SPOP-220ENST00000515508 SPRR5A0A1B0GTR4 108 aa6.09□□□□□ -1.43
SPOP-220ENST00000515508 A0A1B0GU69 56 aa6.09□□□□□ -1.43
SPOP-220ENST00000515508 KRTAP12-3P60328 96 aa6.07□□□□□ -1.44
SPOP-220ENST00000515508 H7BZZ5 65 aa6.05□□□□□ -1.44
SPOP-220ENST00000515508 COX7CP15954 63 aa6.02□□□□□ -1.45
SPOP-220ENST00000515508 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
SPOP-220ENST00000515508 SYNE1Q8NF91 8797 aaKnown RBP5.87□□□□□ -1.47
SPOP-220ENST00000515508 PRR15LQ9BU68 103 aa5.79□□□□□ -1.48
SPOP-220ENST00000515508 KRTAP4-12Q9BQ66 201 aa5.78□□□□□ -1.48
SPOP-220ENST00000515508 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
SPOP-220ENST00000515508 KRTAP9-9Q9BYP9 154 aa5.71□□□□□ -1.5
SPOP-220ENST00000515508 KRTAP9-4Q9BYQ2 154 aa5.71□□□□□ -1.5
SPOP-220ENST00000515508 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
SPOP-220ENST00000515508 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
SPOP-220ENST00000515508 LINC01558Q9Y6Z2 57 aa5.67□□□□□ -1.5
SPOP-220ENST00000515508 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
SPOP-220ENST00000515508 UQCR11O14957 56 aa5.6□□□□□ -1.51
SPOP-220ENST00000515508 ATP5EP56381 51 aaPredicted RBP5.58□□□□□ -1.52
SPOP-220ENST00000515508 ANAPC13Q9BS18 74 aa5.57□□□□□ -1.52
SPOP-220ENST00000515508 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
SPOP-220ENST00000515508 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
SPOP-220ENST00000515508 MT1AP04731 61 aa5.54□□□□□ -1.52
SPOP-220ENST00000515508 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
SPOP-220ENST00000515508 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
SPOP-220ENST00000515508 CCDC179H3BU77 68 aa5.5□□□□□ -1.53
SPOP-220ENST00000515508 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
SPOP-220ENST00000515508 SVIPQ8NHG7 77 aa5.46□□□□□ -1.54
SPOP-220ENST00000515508 MUC5ACP98088 5654 aa5.45□□□□□ -1.54
SPOP-220ENST00000515508 MIR22HGQ0VDD5 57 aa5.43□□□□□ -1.54
SPOP-220ENST00000515508 MUC5BQ9HC84 5762 aaPredicted RBP5.4□□□□□ -1.54
SPOP-220ENST00000515508 K7ERS5 55 aa5.39□□□□□ -1.55
SPOP-220ENST00000515508 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
SPOP-220ENST00000515508 KRTAP6-2Q3LI66 62 aa5.34□□□□□ -1.55
SPOP-220ENST00000515508 H3BS24 57 aa5.31□□□□□ -1.56
SPOP-220ENST00000515508 OBSCNQ5VST9 7968 aa5.31□□□□□ -1.56
SPOP-220ENST00000515508 KRTAP9-6A8MVA2 160 aa5.28□□□□□ -1.56
SPOP-220ENST00000515508 TMEM258P61165 79 aa5.28□□□□□ -1.56
SPOP-220ENST00000515508 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
SPOP-220ENST00000515508 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
SPOP-220ENST00000515508 PSPHP1O15172 72 aa5.11□□□□□ -1.59
SPOP-220ENST00000515508 PCP4P48539 62 aa5.09□□□□□ -1.59
SPOP-220ENST00000515508 CDC42SE1Q9NRR8 79 aa5.08□□□□□ -1.6
SPOP-220ENST00000515508 MT3P25713 68 aa5.07□□□□□ -1.6
SPOP-220ENST00000515508 V9GYY9 64 aa5.07□□□□□ -1.6
SPOP-220ENST00000515508 RPS28P62857 69 aaKnown RBP5.06□□□□□ -1.6
SPOP-220ENST00000515508 Q1T7F1 81 aa5.06□□□□□ -1.6
SPOP-220ENST00000515508 ROMO1P60602 79 aa4.96□□□□□ -1.62
SPOP-220ENST00000515508 A6NED7 52 aa4.91□□□□□ -1.62
SPOP-220ENST00000515508 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
SPOP-220ENST00000515508 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
SPOP-220ENST00000515508 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
SPOP-220ENST00000515508 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
SPOP-220ENST00000515508 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
SPOP-220ENST00000515508 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
SPOP-220ENST00000515508 PRO0628Q9UI54 55 aa4.05□□□□□ -1.76
SPOP-220ENST00000515508 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
SPOP-220ENST00000515508 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
SPOP-220ENST00000515508 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
SPOP-220ENST00000515508 LCE3DQ9BYE3 92 aa3.92□□□□□ -1.78
SPOP-220ENST00000515508 KTN1-AS1Q86SY8 53 aa3.78□□□□□ -1.8
SPOP-220ENST00000515508 PHGR1C9JFL3 82 aa3.77□□□□□ -1.81
SPOP-220ENST00000515508 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
SPOP-220ENST00000515508 KRTAP21-2Q3LI59 83 aa3.66□□□□□ -1.82
SPOP-220ENST00000515508 LCE3EQ5T5B0 92 aa3.63□□□□□ -1.83
SPOP-220ENST00000515508 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
SPOP-220ENST00000515508 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
SPOP-220ENST00000515508 NDUFAF8A1L188 74 aa3.25□□□□□ -1.89
SPOP-220ENST00000515508 LUZP6Q538Z0 58 aa3.09□□□□□ -1.91
SPOP-220ENST00000515508 KRTAP21-1Q3LI58 79 aa2.87□□□□□ -1.95
SPOP-220ENST00000515508 PRM1P04553 51 aa2.52□□□□□ -2.01
SPOP-220ENST00000515508 INE1O15225 51 aa2.39□□□□□ -2.03
SPOP-220ENST00000515508 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 14.1 ms