RNA–Protein interactions for RNA: ENST00000515289.2

NPHP3-211, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 556 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-211ENST00000515289 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
NPHP3-211ENST00000515289 MUC2Q02817 5179 aa2.69□□□□□ -1.98
NPHP3-211ENST00000515289 M0QZ58 72 aa2.67□□□□□ -1.98
NPHP3-211ENST00000515289 KRTAP5-9P26371 169 aa2.67□□□□□ -1.98
NPHP3-211ENST00000515289 A0A0D9SG42 100 aa2.66□□□□□ -1.98
NPHP3-211ENST00000515289 MT1HP80294 61 aa2.66□□□□□ -1.98
NPHP3-211ENST00000515289 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
NPHP3-211ENST00000515289 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
NPHP3-211ENST00000515289 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
NPHP3-211ENST00000515289 MT2AP02795 61 aa2.59□□□□□ -1.99
NPHP3-211ENST00000515289 CRIPTQ9P021 101 aa2.59□□□□□ -1.99
NPHP3-211ENST00000515289 MT1FP04733 61 aa2.58□□□□□ -2
NPHP3-211ENST00000515289 M0R2T5 61 aa2.56□□□□□ -2
NPHP3-211ENST00000515289 SPRR2GQ9BYE4 73 aa2.56□□□□□ -2
NPHP3-211ENST00000515289 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
NPHP3-211ENST00000515289 C10orf95Q9H7T3 257 aa2.51□□□□□ -2.01
NPHP3-211ENST00000515289 OBSCNQ5VST9 7968 aa2.5□□□□□ -2.01
NPHP3-211ENST00000515289 KRTAP19-8Q3LI54 63 aa2.5□□□□□ -2.01
NPHP3-211ENST00000515289 MT1BP07438 61 aa2.47□□□□□ -2.01
NPHP3-211ENST00000515289 KRTAP5-5Q701N2 237 aaPredicted RBP2.43□□□□□ -2.02
NPHP3-211ENST00000515289 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
NPHP3-211ENST00000515289 MT1XP80297 61 aa2.4□□□□□ -2.03
NPHP3-211ENST00000515289 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
NPHP3-211ENST00000515289 TNP1P09430 55 aa2.36□□□□□ -2.03
NPHP3-211ENST00000515289 USH2AO75445 5202 aa2.32□□□□□ -2.04
NPHP3-211ENST00000515289 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
NPHP3-211ENST00000515289 KRTAP8-1Q8IUC2 63 aa2.26□□□□□ -2.05
NPHP3-211ENST00000515289 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
NPHP3-211ENST00000515289 SSPOA2VEC9 5147 aa2.24□□□□□ -2.05
NPHP3-211ENST00000515289 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
NPHP3-211ENST00000515289 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
NPHP3-211ENST00000515289 KRTAP19-5Q3LI72 72 aa2.16□□□□□ -2.06
NPHP3-211ENST00000515289 KRTAP19-7Q3SYF9 63 aa2.14□□□□□ -2.07
NPHP3-211ENST00000515289 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
NPHP3-211ENST00000515289 KMT2DO14686 5537 aa2.11□□□□□ -2.07
NPHP3-211ENST00000515289 MT1EP04732 61 aa2.09□□□□□ -2.07
NPHP3-211ENST00000515289 MT1LQ93083 61 aa2.06□□□□□ -2.08
NPHP3-211ENST00000515289 FSIP2Q5CZC0 6907 aa2.04□□□□□ -2.08
NPHP3-211ENST00000515289 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
NPHP3-211ENST00000515289 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
NPHP3-211ENST00000515289 MUC12Q9UKN1 5478 aa1.96□□□□□ -2.1
NPHP3-211ENST00000515289 MT1MQ8N339 61 aa1.96□□□□□ -2.1
NPHP3-211ENST00000515289 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
NPHP3-211ENST00000515289 MT1GP13640 62 aa1.95□□□□□ -2.1
NPHP3-211ENST00000515289 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.1
NPHP3-211ENST00000515289 KRTAP5-7Q6L8G8 165 aa1.89□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP2-3P0C7H8 128 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP2-4Q9BYR9 128 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 MDN1Q9NU22 5596 aa1.86□□□□□ -2.11
NPHP3-211ENST00000515289 SPRR2EP22531 72 aa1.85□□□□□ -2.11
NPHP3-211ENST00000515289 SPRR2BP35325 72 aa1.85□□□□□ -2.11
NPHP3-211ENST00000515289 SPRR2AP35326 72 aa1.85□□□□□ -2.11
NPHP3-211ENST00000515289 SYNE2Q8WXH0 6885 aaKnown RBP1.83□□□□□ -2.12
NPHP3-211ENST00000515289 SPRR2DP22532 72 aa1.77□□□□□ -2.13
NPHP3-211ENST00000515289 MT1AP04731 61 aa1.75□□□□□ -2.13
NPHP3-211ENST00000515289 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
NPHP3-211ENST00000515289 NEBP20929 6669 aa1.73□□□□□ -2.13
NPHP3-211ENST00000515289 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
NPHP3-211ENST00000515289 DSTQ03001 7570 aaKnown RBP1.68□□□□□ -2.14
NPHP3-211ENST00000515289 SYNE1Q8NF91 8797 aaKnown RBP1.65□□□□□ -2.15
NPHP3-211ENST00000515289 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP20-1Q3LI63 56 aa1.56□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
NPHP3-211ENST00000515289 MT4P47944 62 aa1.53□□□□□ -2.16
NPHP3-211ENST00000515289 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
NPHP3-211ENST00000515289 HMCN1Q96RW7 5635 aa1.51□□□□□ -2.17
NPHP3-211ENST00000515289 PRM1P04553 51 aa1.35□□□□□ -2.19
NPHP3-211ENST00000515289 AHNAK2Q8IVF2 5795 aa1.35□□□□□ -2.19
NPHP3-211ENST00000515289 KRTAP5-10Q6L8G5 202 aa1.3□□□□□ -2.2
NPHP3-211ENST00000515289 MUC5ACP98088 5654 aa1.3□□□□□ -2.2
NPHP3-211ENST00000515289 AHNAKQ09666 5890 aaKnown RBP1.22□□□□□ -2.21
NPHP3-211ENST00000515289 MUC5BQ9HC84 5762 aaPredicted RBP1.12□□□□□ -2.23
NPHP3-211ENST00000515289 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
NPHP3-211ENST00000515289 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
NPHP3-211ENST00000515289 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 1294.7 ms