RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
SNF8-213ENST00000514929 KRTAP4-3Q9BYR4 195 aa8.48□□□□□ -1.05
SNF8-213ENST00000514929 KRTAP12-3P60328 96 aa8.45□□□□□ -1.06
SNF8-213ENST00000514929 LCE1DQ5T752 114 aa8.44□□□□□ -1.06
SNF8-213ENST00000514929 LCE4AQ5TA78 99 aa8.44□□□□□ -1.06
SNF8-213ENST00000514929 GPR98Q8WXG9 6306 aa8.4□□□□□ -1.07
SNF8-213ENST00000514929 MT4P47944 62 aa8.37□□□□□ -1.07
SNF8-213ENST00000514929 K7ERS5 55 aa8.36□□□□□ -1.07
SNF8-213ENST00000514929 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
SNF8-213ENST00000514929 V9GYY9 64 aa8.34□□□□□ -1.07
SNF8-213ENST00000514929 PSPHP1O15172 72 aa8.31□□□□□ -1.08
SNF8-213ENST00000514929 KRTAP4-7Q9BYR0 210 aa8.29□□□□□ -1.08
SNF8-213ENST00000514929 HMCN1Q96RW7 5635 aa8.28□□□□□ -1.08
SNF8-213ENST00000514929 KRTAP5-4Q6L8H1 288 aa8.26□□□□□ -1.09
SNF8-213ENST00000514929 Q1T7F1 81 aa8.25□□□□□ -1.09
SNF8-213ENST00000514929 KRTAP4-6Q9BYQ5 205 aa8.11□□□□□ -1.11
SNF8-213ENST00000514929 A6NED7 52 aa8.04□□□□□ -1.12
SNF8-213ENST00000514929 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
SNF8-213ENST00000514929 AHNAK2Q8IVF2 5795 aa7.97□□□□□ -1.13
SNF8-213ENST00000514929 KRTAP19-4Q3LI73 84 aa7.95□□□□□ -1.14
SNF8-213ENST00000514929 KRTAP5-5Q701N2 237 aaPredicted RBP7.94□□□□□ -1.14
SNF8-213ENST00000514929 KRTAP15-1Q3LI76 137 aa7.9□□□□□ -1.14
SNF8-213ENST00000514929 CDC42SE1Q9NRR8 79 aa7.89□□□□□ -1.15
SNF8-213ENST00000514929 LOC100996750A0A140TA64 210 aa7.85□□□□□ -1.15
SNF8-213ENST00000514929 KRTAP20-2Q3LI61 65 aa7.82□□□□□ -1.16
SNF8-213ENST00000514929 KRTAP5-10Q6L8G5 202 aa7.82□□□□□ -1.16
SNF8-213ENST00000514929 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
SNF8-213ENST00000514929 KRTAP12-4P60329 112 aa7.78□□□□□ -1.16
SNF8-213ENST00000514929 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
SNF8-213ENST00000514929 LCE3CQ5T5A8 94 aa7.77□□□□□ -1.17
SNF8-213ENST00000514929 ROMO1P60602 79 aa7.75□□□□□ -1.17
SNF8-213ENST00000514929 SYNE1Q8NF91 8797 aaKnown RBP7.69□□□□□ -1.18
SNF8-213ENST00000514929 KRTAP5-3Q6L8H2 238 aa7.66□□□□□ -1.18
SNF8-213ENST00000514929 PCP4P48539 62 aa7.63□□□□□ -1.19
SNF8-213ENST00000514929 KRTAP5-7Q6L8G8 165 aa7.51□□□□□ -1.21
SNF8-213ENST00000514929 MT1AP04731 61 aa7.42□□□□□ -1.22
SNF8-213ENST00000514929 KRTAP6-1Q3LI64 71 aa7.37□□□□□ -1.23
SNF8-213ENST00000514929 KRTAP9-6A8MVA2 160 aa7.31□□□□□ -1.24
SNF8-213ENST00000514929 KRTAP5-2Q701N4 177 aa7.23□□□□□ -1.25
SNF8-213ENST00000514929 KRTAP9-4Q9BYQ2 154 aa7.17□□□□□ -1.26
SNF8-213ENST00000514929 KRTAP4-11Q9BYQ6 195 aa7.13□□□□□ -1.27
SNF8-213ENST00000514929 KRTAP6-2Q3LI66 62 aa7.05□□□□□ -1.28
SNF8-213ENST00000514929 KRTAP5-8O75690 187 aa6.88□□□□□ -1.31
SNF8-213ENST00000514929 BRK1Q8WUW1 75 aa6.86□□□□□ -1.31
SNF8-213ENST00000514929 OBSCNQ5VST9 7968 aa6.84□□□□□ -1.31
SNF8-213ENST00000514929 MT3P25713 68 aa6.8□□□□□ -1.32
SNF8-213ENST00000514929 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
SNF8-213ENST00000514929 MUC5ACP98088 5654 aa6.56□□□□□ -1.36
SNF8-213ENST00000514929 AHNAKQ09666 5890 aaKnown RBP6.54□□□□□ -1.36
SNF8-213ENST00000514929 MUC5BQ9HC84 5762 aaPredicted RBP6.54□□□□□ -1.36
SNF8-213ENST00000514929 KRTAP5-1Q6L8H4 278 aa6.48□□□□□ -1.37
SNF8-213ENST00000514929 PMAIP1Q13794 54 aa6.44□□□□□ -1.38
SNF8-213ENST00000514929 LCE1EQ5T753 118 aa6.22□□□□□ -1.41
SNF8-213ENST00000514929 PRAC1Q96KF2 57 aa6.22□□□□□ -1.41
SNF8-213ENST00000514929 LCE1BQ5T7P3 118 aa5.9□□□□□ -1.46
SNF8-213ENST00000514929 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
SNF8-213ENST00000514929 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
SNF8-213ENST00000514929 LCE1CQ5T751 118 aa5.77□□□□□ -1.49
SNF8-213ENST00000514929 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
SNF8-213ENST00000514929 LCE3DQ9BYE3 92 aa5.62□□□□□ -1.51
SNF8-213ENST00000514929 SVIPQ8NHG7 77 aa5.48□□□□□ -1.53
SNF8-213ENST00000514929 KRTAP4-12Q9BQ66 201 aa5.35□□□□□ -1.55
SNF8-213ENST00000514929 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
SNF8-213ENST00000514929 LCE3EQ5T5B0 92 aa5.28□□□□□ -1.56
SNF8-213ENST00000514929 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.24□□□□□ -1.57
SNF8-213ENST00000514929 KRTAP5-11Q6L8G4 156 aa5.23□□□□□ -1.57
SNF8-213ENST00000514929 LCE1FQ5T754 118 aa5.09□□□□□ -1.59
SNF8-213ENST00000514929 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
SNF8-213ENST00000514929 PHGR1C9JFL3 82 aa4.58□□□□□ -1.68
SNF8-213ENST00000514929 KRTAP4-4Q9BYR3 166 aa4.46□□□□□ -1.7
SNF8-213ENST00000514929 MUC19Q7Z5P9 8384 aa4.22□□□□□ -1.73
SNF8-213ENST00000514929 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
SNF8-213ENST00000514929 H3BS24 57 aa3.98□□□□□ -1.77
SNF8-213ENST00000514929 PRM1P04553 51 aa3.97□□□□□ -1.77
SNF8-213ENST00000514929 KRTAP21-1Q3LI58 79 aa3.47□□□□□ -1.85
SNF8-213ENST00000514929 INE1O15225 51 aa3.27□□□□□ -1.89
SNF8-213ENST00000514929 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
SNF8-213ENST00000514929 MUC16Q8WXI7 14507 aa3□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 167.1 ms