RNA–Protein interactions for RNA: ENST00000514649.5

TNFRSF8-205, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,412 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-205ENST00000514649 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
TNFRSF8-205ENST00000514649 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
TNFRSF8-205ENST00000514649 KRTAP19-4Q3LI73 84 aa6.18□□□□□ -1.42
TNFRSF8-205ENST00000514649 MT1LQ93083 61 aa6.17□□□□□ -1.42
TNFRSF8-205ENST00000514649 MT1EP04732 61 aa6.13□□□□□ -1.43
TNFRSF8-205ENST00000514649 KRTAP9-6A0A140TA67 174 aa6.13□□□□□ -1.43
TNFRSF8-205ENST00000514649 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
TNFRSF8-205ENST00000514649 SYNE2Q8WXH0 6885 aaKnown RBP5.93□□□□□ -1.46
TNFRSF8-205ENST00000514649 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
TNFRSF8-205ENST00000514649 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
TNFRSF8-205ENST00000514649 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
TNFRSF8-205ENST00000514649 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
TNFRSF8-205ENST00000514649 MT1GP13640 62 aa5.82□□□□□ -1.48
TNFRSF8-205ENST00000514649 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
TNFRSF8-205ENST00000514649 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
TNFRSF8-205ENST00000514649 MT1MQ8N339 61 aa5.72□□□□□ -1.49
TNFRSF8-205ENST00000514649 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
TNFRSF8-205ENST00000514649 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
TNFRSF8-205ENST00000514649 KRTAP5-9P26371 169 aa5.64□□□□□ -1.51
TNFRSF8-205ENST00000514649 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
TNFRSF8-205ENST00000514649 KRTAP9-7A8MTY7 169 aa5.59□□□□□ -1.51
TNFRSF8-205ENST00000514649 MDN1Q9NU22 5596 aa5.59□□□□□ -1.51
TNFRSF8-205ENST00000514649 DSTQ03001 7570 aaKnown RBP5.58□□□□□ -1.52
TNFRSF8-205ENST00000514649 LCE1AQ5T7P2 110 aa5.5□□□□□ -1.53
TNFRSF8-205ENST00000514649 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
TNFRSF8-205ENST00000514649 SPRR2EP22531 72 aa5.44□□□□□ -1.54
TNFRSF8-205ENST00000514649 SPRR2BP35325 72 aa5.44□□□□□ -1.54
TNFRSF8-205ENST00000514649 SPRR2AP35326 72 aa5.44□□□□□ -1.54
TNFRSF8-205ENST00000514649 LCE3BQ5TA77 95 aa5.44□□□□□ -1.54
TNFRSF8-205ENST00000514649 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.55
TNFRSF8-205ENST00000514649 NEBP20929 6669 aa5.33□□□□□ -1.56
TNFRSF8-205ENST00000514649 MT1AP04731 61 aa5.31□□□□□ -1.56
TNFRSF8-205ENST00000514649 SYNE1Q8NF91 8797 aaKnown RBP5.3□□□□□ -1.56
TNFRSF8-205ENST00000514649 KRTAP6-1Q3LI64 71 aa5.26□□□□□ -1.57
TNFRSF8-205ENST00000514649 SPRR2DP22532 72 aa5.23□□□□□ -1.57
TNFRSF8-205ENST00000514649 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
TNFRSF8-205ENST00000514649 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
TNFRSF8-205ENST00000514649 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.59
TNFRSF8-205ENST00000514649 PRM1P04553 51 aa5.13□□□□□ -1.59
TNFRSF8-205ENST00000514649 KRTAP5-5Q701N2 237 aaPredicted RBP5.13□□□□□ -1.59
TNFRSF8-205ENST00000514649 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
TNFRSF8-205ENST00000514649 KRTAP20-1Q3LI63 56 aa4.92□□□□□ -1.62
TNFRSF8-205ENST00000514649 KRTAP9-4Q9BYQ2 154 aa4.85□□□□□ -1.63
TNFRSF8-205ENST00000514649 KRTAP6-2Q3LI66 62 aa4.82□□□□□ -1.64
TNFRSF8-205ENST00000514649 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
TNFRSF8-205ENST00000514649 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
TNFRSF8-205ENST00000514649 KRTAP5-4Q6L8H1 288 aa4.67□□□□□ -1.66
TNFRSF8-205ENST00000514649 MT3P25713 68 aa4.62□□□□□ -1.67
TNFRSF8-205ENST00000514649 MT4P47944 62 aa4.6□□□□□ -1.67
TNFRSF8-205ENST00000514649 LCE4AQ5TA78 99 aa4.57□□□□□ -1.68
TNFRSF8-205ENST00000514649 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
TNFRSF8-205ENST00000514649 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
TNFRSF8-205ENST00000514649 KRTAP20-2Q3LI61 65 aa4.4□□□□□ -1.71
TNFRSF8-205ENST00000514649 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
TNFRSF8-205ENST00000514649 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
TNFRSF8-205ENST00000514649 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
TNFRSF8-205ENST00000514649 MUC5ACP98088 5654 aa3.98□□□□□ -1.77
TNFRSF8-205ENST00000514649 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
TNFRSF8-205ENST00000514649 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
TNFRSF8-205ENST00000514649 GPR98Q8WXG9 6306 aa3.78□□□□□ -1.8
TNFRSF8-205ENST00000514649 LCE1BQ5T7P3 118 aa3.74□□□□□ -1.81
TNFRSF8-205ENST00000514649 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
TNFRSF8-205ENST00000514649 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
TNFRSF8-205ENST00000514649 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
TNFRSF8-205ENST00000514649 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
TNFRSF8-205ENST00000514649 KRTAP4-2Q9BYR5 136 aa3.53□□□□□ -1.84
TNFRSF8-205ENST00000514649 LCE1CQ5T751 118 aa3.5□□□□□ -1.85
TNFRSF8-205ENST00000514649 KRTAP21-1Q3LI58 79 aa3.43□□□□□ -1.86
TNFRSF8-205ENST00000514649 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
TNFRSF8-205ENST00000514649 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
TNFRSF8-205ENST00000514649 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
TNFRSF8-205ENST00000514649 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
TNFRSF8-205ENST00000514649 KRTAP4-4Q9BYR3 166 aa3.14□□□□□ -1.91
TNFRSF8-205ENST00000514649 AHNAKQ09666 5890 aaKnown RBP3.06□□□□□ -1.92
TNFRSF8-205ENST00000514649 KRTAP5-11Q6L8G4 156 aa3.05□□□□□ -1.92
TNFRSF8-205ENST00000514649 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
TNFRSF8-205ENST00000514649 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
TNFRSF8-205ENST00000514649 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 161 ms