RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
LPCAT1-206ENST00000514484 MIR22HGQ0VDD5 57 aa6.61□□□□□ -1.35
LPCAT1-206ENST00000514484 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
LPCAT1-206ENST00000514484 PSPHP1O15172 72 aa6.55□□□□□ -1.36
LPCAT1-206ENST00000514484 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
LPCAT1-206ENST00000514484 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
LPCAT1-206ENST00000514484 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
LPCAT1-206ENST00000514484 V9GYY9 64 aa6.47□□□□□ -1.37
LPCAT1-206ENST00000514484 Q1T7F1 81 aa6.46□□□□□ -1.38
LPCAT1-206ENST00000514484 K7ERS5 55 aa6.44□□□□□ -1.38
LPCAT1-206ENST00000514484 MT4P47944 62 aa6.44□□□□□ -1.38
LPCAT1-206ENST00000514484 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
LPCAT1-206ENST00000514484 LCE4AQ5TA78 99 aa6.43□□□□□ -1.38
LPCAT1-206ENST00000514484 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
LPCAT1-206ENST00000514484 KRTAP5-4Q6L8H1 288 aa6.34□□□□□ -1.39
LPCAT1-206ENST00000514484 GPR98Q8WXG9 6306 aa6.34□□□□□ -1.39
LPCAT1-206ENST00000514484 A6NED7 52 aa6.3□□□□□ -1.4
LPCAT1-206ENST00000514484 KRTAP4-6Q9BYQ5 205 aa6.25□□□□□ -1.41
LPCAT1-206ENST00000514484 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
LPCAT1-206ENST00000514484 AHNAK2Q8IVF2 5795 aa6.18□□□□□ -1.42
LPCAT1-206ENST00000514484 KRTAP23-1A1A580 65 aa6.14□□□□□ -1.43
LPCAT1-206ENST00000514484 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
LPCAT1-206ENST00000514484 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
LPCAT1-206ENST00000514484 CDC42SE1Q9NRR8 79 aa6.13□□□□□ -1.43
LPCAT1-206ENST00000514484 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
LPCAT1-206ENST00000514484 ROMO1P60602 79 aa6.04□□□□□ -1.44
LPCAT1-206ENST00000514484 KRTAP19-4Q3LI73 84 aa6.02□□□□□ -1.45
LPCAT1-206ENST00000514484 KRTAP20-2Q3LI61 65 aa6.01□□□□□ -1.45
LPCAT1-206ENST00000514484 LCE3CQ5T5A8 94 aa6.01□□□□□ -1.45
LPCAT1-206ENST00000514484 KRTAP5-10Q6L8G5 202 aa5.98□□□□□ -1.45
LPCAT1-206ENST00000514484 KRTAP12-4P60329 112 aa5.94□□□□□ -1.46
LPCAT1-206ENST00000514484 SPRR5A0A1B0GTR4 108 aa5.93□□□□□ -1.46
LPCAT1-206ENST00000514484 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
LPCAT1-206ENST00000514484 KRTAP5-3Q6L8H2 238 aa5.85□□□□□ -1.47
LPCAT1-206ENST00000514484 KRTAP9-6A8MVA2 160 aa5.72□□□□□ -1.49
LPCAT1-206ENST00000514484 MT1AP04731 61 aa5.72□□□□□ -1.49
LPCAT1-206ENST00000514484 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
LPCAT1-206ENST00000514484 KRTAP5-7Q6L8G8 165 aa5.71□□□□□ -1.5
LPCAT1-206ENST00000514484 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
LPCAT1-206ENST00000514484 BRK1Q8WUW1 75 aa5.57□□□□□ -1.52
LPCAT1-206ENST00000514484 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
LPCAT1-206ENST00000514484 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
LPCAT1-206ENST00000514484 KRTAP6-2Q3LI66 62 aa5.45□□□□□ -1.54
LPCAT1-206ENST00000514484 PRO0628Q9UI54 55 aa5.35□□□□□ -1.55
LPCAT1-206ENST00000514484 KRTAP5-8O75690 187 aa5.28□□□□□ -1.56
LPCAT1-206ENST00000514484 PMAIP1Q13794 54 aa5.26□□□□□ -1.57
LPCAT1-206ENST00000514484 MT3P25713 68 aa5.21□□□□□ -1.58
LPCAT1-206ENST00000514484 OBSCNQ5VST9 7968 aa5.19□□□□□ -1.58
LPCAT1-206ENST00000514484 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
LPCAT1-206ENST00000514484 AHNAKQ09666 5890 aaKnown RBP5□□□□□ -1.61
LPCAT1-206ENST00000514484 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
LPCAT1-206ENST00000514484 KTN1-AS1Q86SY8 53 aa4.99□□□□□ -1.61
LPCAT1-206ENST00000514484 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
LPCAT1-206ENST00000514484 PRAC1Q96KF2 57 aa4.98□□□□□ -1.61
LPCAT1-206ENST00000514484 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
LPCAT1-206ENST00000514484 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
LPCAT1-206ENST00000514484 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
LPCAT1-206ENST00000514484 H3BS24 57 aa4.62□□□□□ -1.67
LPCAT1-206ENST00000514484 LCE1BQ5T7P3 118 aa4.55□□□□□ -1.68
LPCAT1-206ENST00000514484 KRTAP4-2Q9BYR5 136 aa4.54□□□□□ -1.68
LPCAT1-206ENST00000514484 KRTAP4-12Q9BQ66 201 aa4.46□□□□□ -1.7
LPCAT1-206ENST00000514484 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
LPCAT1-206ENST00000514484 LCE3DQ9BYE3 92 aa4.33□□□□□ -1.72
LPCAT1-206ENST00000514484 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
LPCAT1-206ENST00000514484 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
LPCAT1-206ENST00000514484 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
LPCAT1-206ENST00000514484 KRTAP5-11Q6L8G4 156 aa4.01□□□□□ -1.77
LPCAT1-206ENST00000514484 LCE1FQ5T754 118 aa3.84□□□□□ -1.79
LPCAT1-206ENST00000514484 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
LPCAT1-206ENST00000514484 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
LPCAT1-206ENST00000514484 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
LPCAT1-206ENST00000514484 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
LPCAT1-206ENST00000514484 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
LPCAT1-206ENST00000514484 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
LPCAT1-206ENST00000514484 INE1O15225 51 aa3.2□□□□□ -1.9
LPCAT1-206ENST00000514484 PRM1P04553 51 aa3.13□□□□□ -1.91
LPCAT1-206ENST00000514484 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
LPCAT1-206ENST00000514484 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms