RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 LINC00208Q96KT6 92 aa1.04□□□□□ -2.24
CHD1-211ENST00000514344 TP53AIP1Q9HCN2 124 aa1.04□□□□□ -2.24
CHD1-211ENST00000514344 LOC101927531A0A1B0GV80 90 aa1.03□□□□□ -2.24
CHD1-211ENST00000514344 C10orf95Q9H7T3 257 aa1.03□□□□□ -2.24
CHD1-211ENST00000514344 LUZP6Q538Z0 58 aa1.03□□□□□ -2.24
CHD1-211ENST00000514344 PYY3Q5JQD4 70 aa1.03□□□□□ -2.24
CHD1-211ENST00000514344 HIST1H4AP62805 103 aaKnown RBP1.02□□□□□ -2.25
CHD1-211ENST00000514344 SMIM20Q8N5G0 67 aa1.02□□□□□ -2.25
CHD1-211ENST00000514344 SPINT4Q6UDR6 99 aa1.02□□□□□ -2.25
CHD1-211ENST00000514344 UQCR10Q9UDW1 63 aa1.02□□□□□ -2.25
CHD1-211ENST00000514344 K7ERS5 55 aa1.02□□□□□ -2.25
CHD1-211ENST00000514344 RPS28P62857 69 aaKnown RBP1.01□□□□□ -2.25
CHD1-211ENST00000514344 KRTAP13-4Q3LI77 160 aa1□□□□□ -2.25
CHD1-211ENST00000514344 H3BT86 120 aa0.99□□□□□ -2.25
CHD1-211ENST00000514344 LCE1CQ5T751 118 aa0.99□□□□□ -2.25
CHD1-211ENST00000514344 LCE1BQ5T7P3 118 aa0.99□□□□□ -2.25
CHD1-211ENST00000514344 TRAV7A0A075B6U4 112 aa0.98□□□□□ -2.25
CHD1-211ENST00000514344 M0R143 59 aa0.98□□□□□ -2.25
CHD1-211ENST00000514344 KRTAP6-2Q3LI66 62 aa0.98□□□□□ -2.25
CHD1-211ENST00000514344 SPATA8Q6RVD6 105 aa0.97□□□□□ -2.25
CHD1-211ENST00000514344 KTN1-AS1Q86SY8 53 aa0.97□□□□□ -2.25
CHD1-211ENST00000514344 CHKB-CPT1BH3BT56 60 aa0.96□□□□□ -2.26
CHD1-211ENST00000514344 ATOX1O00244 68 aa0.96□□□□□ -2.26
CHD1-211ENST00000514344 TAX1BP3O14907 124 aa0.96□□□□□ -2.26
CHD1-211ENST00000514344 KRTAP6-1Q3LI64 71 aa0.96□□□□□ -2.26
CHD1-211ENST00000514344 A0A1B0GU33 70 aa0.96□□□□□ -2.26
CHD1-211ENST00000514344 A6NED7 52 aa0.95□□□□□ -2.26
CHD1-211ENST00000514344 UQCRQO14949 82 aa0.95□□□□□ -2.26
CHD1-211ENST00000514344 ETDBQ3ZM63 59 aa0.95□□□□□ -2.26
CHD1-211ENST00000514344 DMAC1Q96GE9 116 aa0.94□□□□□ -2.26
CHD1-211ENST00000514344 H3BPC8 53 aa0.93□□□□□ -2.26
CHD1-211ENST00000514344 KRTAP12-3P60328 96 aa0.93□□□□□ -2.26
CHD1-211ENST00000514344 MT1AP04731 61 aa0.92□□□□□ -2.26
CHD1-211ENST00000514344 A8MU10 97 aa0.91□□□□□ -2.26
CHD1-211ENST00000514344 TNP1P09430 55 aa0.91□□□□□ -2.26
CHD1-211ENST00000514344 ACYP2P14621 99 aa0.91□□□□□ -2.26
CHD1-211ENST00000514344 KRTAP25-1Q3LHN0 102 aa0.91□□□□□ -2.26
CHD1-211ENST00000514344 LCE1FQ5T754 118 aa0.91□□□□□ -2.26
CHD1-211ENST00000514344 SPTSSBQ8NFR3 76 aa0.9□□□□□ -2.27
CHD1-211ENST00000514344 A0A1B0GV90 55 aa0.9□□□□□ -2.27
CHD1-211ENST00000514344 KRTAP12-1P59990 96 aa0.9□□□□□ -2.27
CHD1-211ENST00000514344 PRO0461Q9UI25 63 aa0.9□□□□□ -2.27
CHD1-211ENST00000514344 J3QR89 54 aa0.88□□□□□ -2.27
CHD1-211ENST00000514344 MUC19Q7Z5P9 8384 aa0.88□□□□□ -2.27
CHD1-211ENST00000514344 PHGR1C9JFL3 82 aa0.88□□□□□ -2.27
CHD1-211ENST00000514344 K7ERU9 68 aa0.87□□□□□ -2.27
CHD1-211ENST00000514344 SNURFQ9Y675 71 aa0.87□□□□□ -2.27
CHD1-211ENST00000514344 SERP1Q9Y6X1 66 aa0.87□□□□□ -2.27
CHD1-211ENST00000514344 BRK1Q8WUW1 75 aa0.86□□□□□ -2.27
CHD1-211ENST00000514344 SMIM6P0DI80 62 aa0.85□□□□□ -2.27
CHD1-211ENST00000514344 ROMO1P60602 79 aa0.85□□□□□ -2.27
CHD1-211ENST00000514344 ATP5EP2Q5VTU8 51 aa0.84□□□□□ -2.27
CHD1-211ENST00000514344 SERP2Q8N6R1 65 aa0.84□□□□□ -2.27
CHD1-211ENST00000514344 TMEM258P61165 79 aa0.84□□□□□ -2.28
CHD1-211ENST00000514344 GTF2H5Q6ZYL4 71 aa0.84□□□□□ -2.28
CHD1-211ENST00000514344 COL5A1-AS1Q5SY13 56 aa0.83□□□□□ -2.28
CHD1-211ENST00000514344 F8W1H4 67 aa0.82□□□□□ -2.28
CHD1-211ENST00000514344 LINC00643Q86TS7 51 aa0.82□□□□□ -2.28
CHD1-211ENST00000514344 Q1T7F1 81 aa0.81□□□□□ -2.28
CHD1-211ENST00000514344 LCE3CQ5T5A8 94 aa0.81□□□□□ -2.28
CHD1-211ENST00000514344 COA5Q86WW8 74 aa0.81□□□□□ -2.28
CHD1-211ENST00000514344 CCDC179H3BU77 68 aa0.79□□□□□ -2.28
CHD1-211ENST00000514344 A0A1B0GU69 56 aa0.78□□□□□ -2.28
CHD1-211ENST00000514344 MIR22HGQ0VDD5 57 aa0.78□□□□□ -2.28
CHD1-211ENST00000514344 COX7CP15954 63 aa0.77□□□□□ -2.29
CHD1-211ENST00000514344 INE1O15225 51 aa0.76□□□□□ -2.29
CHD1-211ENST00000514344 ATP5EP56381 51 aaPredicted RBP0.75□□□□□ -2.29
CHD1-211ENST00000514344 LCE3EQ5T5B0 92 aa0.74□□□□□ -2.29
CHD1-211ENST00000514344 CDC42SE1Q9NRR8 79 aa0.72□□□□□ -2.29
CHD1-211ENST00000514344 KRTAP21-2Q3LI59 83 aa0.72□□□□□ -2.29
CHD1-211ENST00000514344 H7BZZ5 65 aa0.71□□□□□ -2.3
CHD1-211ENST00000514344 PRR15LQ9BU68 103 aa0.68□□□□□ -2.3
CHD1-211ENST00000514344 UQCR11O14957 56 aa0.65□□□□□ -2.31
CHD1-211ENST00000514344 LCE3DQ9BYE3 92 aa0.65□□□□□ -2.31
CHD1-211ENST00000514344 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
CHD1-211ENST00000514344 LINC01558Q9Y6Z2 57 aa0.61□□□□□ -2.31
CHD1-211ENST00000514344 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
CHD1-211ENST00000514344 PRM1P04553 51 aa0.33□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 24.5 ms