RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TNP1P09430 55 aa6.55□□□□□ -1.36
SQSTM1-215ENST00000514093 SEC61GP60059 68 aa6.55□□□□□ -1.36
SQSTM1-215ENST00000514093 A0A1B0GU33 70 aa6.54□□□□□ -1.36
SQSTM1-215ENST00000514093 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
SQSTM1-215ENST00000514093 SPANXA2-OT1Q8N9U9 137 aa6.51□□□□□ -1.37
SQSTM1-215ENST00000514093 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
SQSTM1-215ENST00000514093 KRTAP12-3P60328 96 aa6.5□□□□□ -1.37
SQSTM1-215ENST00000514093 SMIM20Q8N5G0 67 aa6.48□□□□□ -1.37
SQSTM1-215ENST00000514093 AHNAKQ09666 5890 aaKnown RBP6.45□□□□□ -1.38
SQSTM1-215ENST00000514093 COA5Q86WW8 74 aa6.44□□□□□ -1.38
SQSTM1-215ENST00000514093 MUC5ACP98088 5654 aa6.42□□□□□ -1.38
SQSTM1-215ENST00000514093 MUC5BQ9HC84 5762 aaPredicted RBP6.38□□□□□ -1.39
SQSTM1-215ENST00000514093 A8MU10 97 aa6.38□□□□□ -1.39
SQSTM1-215ENST00000514093 PCP4P48539 62 aa6.35□□□□□ -1.39
SQSTM1-215ENST00000514093 KRTAP5-8O75690 187 aa6.34□□□□□ -1.39
SQSTM1-215ENST00000514093 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
SQSTM1-215ENST00000514093 SERP2Q8N6R1 65 aa6.28□□□□□ -1.4
SQSTM1-215ENST00000514093 H3BS24 57 aa6.27□□□□□ -1.41
SQSTM1-215ENST00000514093 KRTAP5-2Q701N4 177 aa6.27□□□□□ -1.41
SQSTM1-215ENST00000514093 COX7CP15954 63 aa6.19□□□□□ -1.42
SQSTM1-215ENST00000514093 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
SQSTM1-215ENST00000514093 A0A1B0GU69 56 aa6.11□□□□□ -1.43
SQSTM1-215ENST00000514093 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
SQSTM1-215ENST00000514093 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
SQSTM1-215ENST00000514093 OBSCNQ5VST9 7968 aa6.08□□□□□ -1.44
SQSTM1-215ENST00000514093 MT1AP04731 61 aa6.05□□□□□ -1.44
SQSTM1-215ENST00000514093 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
SQSTM1-215ENST00000514093 H7BZZ5 65 aa6.04□□□□□ -1.44
SQSTM1-215ENST00000514093 KRTAP6-2Q3LI66 62 aa5.96□□□□□ -1.46
SQSTM1-215ENST00000514093 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
SQSTM1-215ENST00000514093 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
SQSTM1-215ENST00000514093 LCE3CQ5T5A8 94 aa5.92□□□□□ -1.46
SQSTM1-215ENST00000514093 A0A0A0MQY5 61 aa5.9□□□□□ -1.46
SQSTM1-215ENST00000514093 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
SQSTM1-215ENST00000514093 KRTAP15-1Q3LI76 137 aa5.84□□□□□ -1.47
SQSTM1-215ENST00000514093 ATP5EP56381 51 aaPredicted RBP5.82□□□□□ -1.48
SQSTM1-215ENST00000514093 TMEM258P61165 79 aa5.81□□□□□ -1.48
SQSTM1-215ENST00000514093 KRTAP5-1Q6L8H4 278 aa5.77□□□□□ -1.49
SQSTM1-215ENST00000514093 PRR15LQ9BU68 103 aa5.68□□□□□ -1.5
SQSTM1-215ENST00000514093 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
SQSTM1-215ENST00000514093 V9GYY9 64 aa5.61□□□□□ -1.51
SQSTM1-215ENST00000514093 MT3P25713 68 aa5.57□□□□□ -1.52
SQSTM1-215ENST00000514093 LINC01558Q9Y6Z2 57 aa5.54□□□□□ -1.52
SQSTM1-215ENST00000514093 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
SQSTM1-215ENST00000514093 UQCR11O14957 56 aa5.49□□□□□ -1.53
SQSTM1-215ENST00000514093 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.54
SQSTM1-215ENST00000514093 Q1T7F1 81 aa5.4□□□□□ -1.54
SQSTM1-215ENST00000514093 PSPHP1O15172 72 aa5.34□□□□□ -1.55
SQSTM1-215ENST00000514093 MIR22HGQ0VDD5 57 aa5.34□□□□□ -1.55
SQSTM1-215ENST00000514093 K7ERS5 55 aa5.32□□□□□ -1.56
SQSTM1-215ENST00000514093 LCE1EQ5T753 118 aa5.23□□□□□ -1.57
SQSTM1-215ENST00000514093 PRO0628Q9UI54 55 aa5.18□□□□□ -1.58
SQSTM1-215ENST00000514093 A6NED7 52 aa5.15□□□□□ -1.59
SQSTM1-215ENST00000514093 LCE1BQ5T7P3 118 aa5.09□□□□□ -1.59
SQSTM1-215ENST00000514093 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
SQSTM1-215ENST00000514093 CDC42SE1Q9NRR8 79 aa5.03□□□□□ -1.6
SQSTM1-215ENST00000514093 PMAIP1Q13794 54 aa4.98□□□□□ -1.61
SQSTM1-215ENST00000514093 KRTAP4-12Q9BQ66 201 aa4.9□□□□□ -1.63
SQSTM1-215ENST00000514093 LCE1CQ5T751 118 aa4.87□□□□□ -1.63
SQSTM1-215ENST00000514093 ROMO1P60602 79 aa4.86□□□□□ -1.63
SQSTM1-215ENST00000514093 PRAC1Q96KF2 57 aa4.86□□□□□ -1.63
SQSTM1-215ENST00000514093 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
SQSTM1-215ENST00000514093 KTN1-AS1Q86SY8 53 aa4.64□□□□□ -1.67
SQSTM1-215ENST00000514093 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
SQSTM1-215ENST00000514093 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
SQSTM1-215ENST00000514093 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
SQSTM1-215ENST00000514093 PHGR1C9JFL3 82 aa4.45□□□□□ -1.7
SQSTM1-215ENST00000514093 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SQSTM1-215ENST00000514093 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
SQSTM1-215ENST00000514093 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
SQSTM1-215ENST00000514093 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
SQSTM1-215ENST00000514093 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
SQSTM1-215ENST00000514093 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
SQSTM1-215ENST00000514093 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
SQSTM1-215ENST00000514093 INE1O15225 51 aa3.36□□□□□ -1.87
SQSTM1-215ENST00000514093 KRTAP21-1Q3LI58 79 aa3.35□□□□□ -1.87
SQSTM1-215ENST00000514093 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.99
SQSTM1-215ENST00000514093 PRM1P04553 51 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 24.8 ms