RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 KRTAP6-3Q3LI67 103 aa2.13□□□□□ -2.07
CLDND1-228ENST00000513873 KRTAP5-7Q6L8G8 165 aa2.13□□□□□ -2.07
CLDND1-228ENST00000513873 SPATA8Q6RVD6 105 aa2.13□□□□□ -2.07
CLDND1-228ENST00000513873 USH2AO75445 5202 aa2.12□□□□□ -2.07
CLDND1-228ENST00000513873 M0QZ58 72 aa2.12□□□□□ -2.07
CLDND1-228ENST00000513873 KRTAP20-1Q3LI63 56 aa2.11□□□□□ -2.07
CLDND1-228ENST00000513873 ADM2Q7Z4H4 148 aa2.11□□□□□ -2.07
CLDND1-228ENST00000513873 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
CLDND1-228ENST00000513873 NEBP20929 6669 aa2.09□□□□□ -2.07
CLDND1-228ENST00000513873 M0R2T5 61 aa2.09□□□□□ -2.07
CLDND1-228ENST00000513873 PMAIP1Q13794 54 aa2.09□□□□□ -2.07
CLDND1-228ENST00000513873 CRIPTQ9P021 101 aa2.09□□□□□ -2.07
CLDND1-228ENST00000513873 KRTAP19-2Q3LHN2 52 aa2.08□□□□□ -2.08
CLDND1-228ENST00000513873 R4GN34 69 aa2.08□□□□□ -2.08
CLDND1-228ENST00000513873 FLGP20930 4061 aaPredicted RBP2.06□□□□□ -2.08
CLDND1-228ENST00000513873 P0C880 135 aa2.04□□□□□ -2.08
CLDND1-228ENST00000513873 A0A0D9SG42 100 aa2.02□□□□□ -2.09
CLDND1-228ENST00000513873 A6NN06 94 aa2.01□□□□□ -2.09
CLDND1-228ENST00000513873 SPINT4Q6UDR6 99 aa2.01□□□□□ -2.09
CLDND1-228ENST00000513873 KRTAP2-3P0C7H8 128 aa2□□□□□ -2.09
CLDND1-228ENST00000513873 LINC01554Q52M75 96 aa2□□□□□ -2.09
CLDND1-228ENST00000513873 KTN1-AS1Q86SY8 53 aa2□□□□□ -2.09
CLDND1-228ENST00000513873 KRTAP2-4Q9BYR9 128 aa2□□□□□ -2.09
CLDND1-228ENST00000513873 MUC12Q9UKN1 5478 aa1.99□□□□□ -2.09
CLDND1-228ENST00000513873 KRTAP19-6Q3LI70 58 aa1.99□□□□□ -2.09
CLDND1-228ENST00000513873 ROMO1P60602 79 aa1.98□□□□□ -2.09
CLDND1-228ENST00000513873 PLAC4Q8WY50 150 aa1.98□□□□□ -2.09
CLDND1-228ENST00000513873 KRTAP13-4Q3LI77 160 aa1.97□□□□□ -2.09
CLDND1-228ENST00000513873 KRTAP12-1P59990 96 aa1.95□□□□□ -2.1
CLDND1-228ENST00000513873 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
CLDND1-228ENST00000513873 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
CLDND1-228ENST00000513873 SPRR2GQ9BYE4 73 aa1.94□□□□□ -2.1
CLDND1-228ENST00000513873 KMT2DO14686 5537 aa1.94□□□□□ -2.1
CLDND1-228ENST00000513873 MT2AP02795 61 aa1.91□□□□□ -2.1
CLDND1-228ENST00000513873 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
CLDND1-228ENST00000513873 GPR98Q8WXG9 6306 aa1.91□□□□□ -2.1
CLDND1-228ENST00000513873 KRTAP25-1Q3LHN0 102 aa1.9□□□□□ -2.11
CLDND1-228ENST00000513873 PRO2289Q9P1D8 64 aa1.9□□□□□ -2.11
CLDND1-228ENST00000513873 MT1FP04733 61 aa1.89□□□□□ -2.11
CLDND1-228ENST00000513873 TNP1P09430 55 aa1.89□□□□□ -2.11
CLDND1-228ENST00000513873 KRTAP19-8Q3LI54 63 aa1.87□□□□□ -2.11
CLDND1-228ENST00000513873 C10orf95Q9H7T3 257 aa1.82□□□□□ -2.12
CLDND1-228ENST00000513873 MT1BP07438 61 aa1.79□□□□□ -2.12
CLDND1-228ENST00000513873 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
CLDND1-228ENST00000513873 SPRR2EP22531 72 aa1.78□□□□□ -2.12
CLDND1-228ENST00000513873 SPRR2BP35325 72 aa1.78□□□□□ -2.12
CLDND1-228ENST00000513873 SPRR2AP35326 72 aa1.78□□□□□ -2.12
CLDND1-228ENST00000513873 LUZP6Q538Z0 58 aa1.77□□□□□ -2.13
CLDND1-228ENST00000513873 MT1XP80297 61 aa1.75□□□□□ -2.13
CLDND1-228ENST00000513873 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
CLDND1-228ENST00000513873 SPRR2DP22532 72 aa1.73□□□□□ -2.13
CLDND1-228ENST00000513873 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
CLDND1-228ENST00000513873 SPRR2FQ96RM1 72 aa1.72□□□□□ -2.13
CLDND1-228ENST00000513873 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
CLDND1-228ENST00000513873 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
CLDND1-228ENST00000513873 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
CLDND1-228ENST00000513873 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
CLDND1-228ENST00000513873 KRTAP19-5Q3LI72 72 aa1.6□□□□□ -2.15
CLDND1-228ENST00000513873 MT1EP04732 61 aa1.55□□□□□ -2.16
CLDND1-228ENST00000513873 KRTAP19-7Q3SYF9 63 aa1.55□□□□□ -2.16
CLDND1-228ENST00000513873 MT1GP13640 62 aa1.53□□□□□ -2.16
CLDND1-228ENST00000513873 MT4P47944 62 aa1.52□□□□□ -2.17
CLDND1-228ENST00000513873 MT1LQ93083 61 aa1.52□□□□□ -2.17
CLDND1-228ENST00000513873 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
CLDND1-228ENST00000513873 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
CLDND1-228ENST00000513873 MUC5ACP98088 5654 aa1.46□□□□□ -2.18
CLDND1-228ENST00000513873 MT1MQ8N339 61 aa1.45□□□□□ -2.18
CLDND1-228ENST00000513873 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
CLDND1-228ENST00000513873 INE1O15225 51 aa1.36□□□□□ -2.19
CLDND1-228ENST00000513873 KRTAP20-2Q3LI61 65 aa1.36□□□□□ -2.19
CLDND1-228ENST00000513873 MT1AP04731 61 aa1.32□□□□□ -2.2
CLDND1-228ENST00000513873 SYNE1Q8NF91 8797 aaKnown RBP1.28□□□□□ -2.2
CLDND1-228ENST00000513873 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
CLDND1-228ENST00000513873 KRTAP6-2Q3LI66 62 aa1.17□□□□□ -2.22
CLDND1-228ENST00000513873 PRM1P04553 51 aa0.99□□□□□ -2.25
CLDND1-228ENST00000513873 PHGR1C9JFL3 82 aa0.98□□□□□ -2.25
CLDND1-228ENST00000513873 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
CLDND1-228ENST00000513873 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 47.4 ms