RNA–Protein interactions for RNA: ENST00000513801.5

ATP2C1-221, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-221ENST00000513801 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
ATP2C1-221ENST00000513801 LCE2BO14633 110 aa4.09□□□□□ -1.75
ATP2C1-221ENST00000513801 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.76
ATP2C1-221ENST00000513801 MT1LQ93083 61 aa4.04□□□□□ -1.76
ATP2C1-221ENST00000513801 SYNE1Q8NF91 8797 aaKnown RBP4.04□□□□□ -1.76
ATP2C1-221ENST00000513801 MT1GP13640 62 aa4□□□□□ -1.77
ATP2C1-221ENST00000513801 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
ATP2C1-221ENST00000513801 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
ATP2C1-221ENST00000513801 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
ATP2C1-221ENST00000513801 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
ATP2C1-221ENST00000513801 MT1EP04732 61 aa3.95□□□□□ -1.78
ATP2C1-221ENST00000513801 KRTAP9-7A8MTY7 169 aa3.87□□□□□ -1.79
ATP2C1-221ENST00000513801 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
ATP2C1-221ENST00000513801 SSPOA2VEC9 5147 aa3.84□□□□□ -1.79
ATP2C1-221ENST00000513801 PRM1P04553 51 aa3.8□□□□□ -1.8
ATP2C1-221ENST00000513801 KRTAP5-5Q701N2 237 aaPredicted RBP3.69□□□□□ -1.82
ATP2C1-221ENST00000513801 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
ATP2C1-221ENST00000513801 MT1MQ8N339 61 aa3.67□□□□□ -1.82
ATP2C1-221ENST00000513801 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.66□□□□□ -1.82
ATP2C1-221ENST00000513801 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
ATP2C1-221ENST00000513801 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
ATP2C1-221ENST00000513801 KRTAP19-4Q3LI73 84 aa3.62□□□□□ -1.83
ATP2C1-221ENST00000513801 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
ATP2C1-221ENST00000513801 LCE3EQ5T5B0 92 aa3.58□□□□□ -1.84
ATP2C1-221ENST00000513801 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
ATP2C1-221ENST00000513801 KRTAP6-1Q3LI64 71 aa3.54□□□□□ -1.84
ATP2C1-221ENST00000513801 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
ATP2C1-221ENST00000513801 KRTAP2-2Q9BYT5 123 aa3.48□□□□□ -1.85
ATP2C1-221ENST00000513801 MT1AP04731 61 aa3.47□□□□□ -1.85
ATP2C1-221ENST00000513801 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
ATP2C1-221ENST00000513801 KRTAP19-6Q3LI70 58 aa3.37□□□□□ -1.87
ATP2C1-221ENST00000513801 MDN1Q9NU22 5596 aa3.35□□□□□ -1.87
ATP2C1-221ENST00000513801 LCE5AQ5TCM9 118 aa3.34□□□□□ -1.87
ATP2C1-221ENST00000513801 SPRR2FQ96RM1 72 aa3.33□□□□□ -1.88
ATP2C1-221ENST00000513801 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
ATP2C1-221ENST00000513801 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
ATP2C1-221ENST00000513801 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
ATP2C1-221ENST00000513801 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
ATP2C1-221ENST00000513801 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
ATP2C1-221ENST00000513801 NEBP20929 6669 aa3.19□□□□□ -1.9
ATP2C1-221ENST00000513801 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
ATP2C1-221ENST00000513801 MT3P25713 68 aa2.91□□□□□ -1.94
ATP2C1-221ENST00000513801 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
ATP2C1-221ENST00000513801 SPRR2EP22531 72 aa2.9□□□□□ -1.95
ATP2C1-221ENST00000513801 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
ATP2C1-221ENST00000513801 SPRR2AP35326 72 aa2.87□□□□□ -1.95
ATP2C1-221ENST00000513801 SPRR2BP35325 72 aa2.8□□□□□ -1.96
ATP2C1-221ENST00000513801 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
ATP2C1-221ENST00000513801 SPRR2DP22532 72 aa2.77□□□□□ -1.97
ATP2C1-221ENST00000513801 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
ATP2C1-221ENST00000513801 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
ATP2C1-221ENST00000513801 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
ATP2C1-221ENST00000513801 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
ATP2C1-221ENST00000513801 LCE4AQ5TA78 99 aa2.61□□□□□ -1.99
ATP2C1-221ENST00000513801 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
ATP2C1-221ENST00000513801 LCE1BQ5T7P3 118 aa2.55□□□□□ -2
ATP2C1-221ENST00000513801 MT4P47944 62 aa2.54□□□□□ -2
ATP2C1-221ENST00000513801 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
ATP2C1-221ENST00000513801 MUC5BQ9HC84 5762 aaPredicted RBP2.48□□□□□ -2.01
ATP2C1-221ENST00000513801 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
ATP2C1-221ENST00000513801 HMCN1Q96RW7 5635 aa2.42□□□□□ -2.02
ATP2C1-221ENST00000513801 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
ATP2C1-221ENST00000513801 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
ATP2C1-221ENST00000513801 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.04
ATP2C1-221ENST00000513801 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
ATP2C1-221ENST00000513801 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
ATP2C1-221ENST00000513801 KRTAP4-4Q9BYR3 166 aa2.32□□□□□ -2.04
ATP2C1-221ENST00000513801 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
ATP2C1-221ENST00000513801 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
ATP2C1-221ENST00000513801 KRTAP4-12Q9BQ66 201 aa2.26□□□□□ -2.05
ATP2C1-221ENST00000513801 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
ATP2C1-221ENST00000513801 KRTAP4-2Q9BYR5 136 aa2.19□□□□□ -2.06
ATP2C1-221ENST00000513801 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
ATP2C1-221ENST00000513801 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.89□□□□□ -2.11
ATP2C1-221ENST00000513801 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
ATP2C1-221ENST00000513801 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
ATP2C1-221ENST00000513801 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 8.7 ms