RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 SPRR1BP22528 89 aa1.22□□□□□ -2.21
PVT1-202ENST00000512617 KRTAP12-3P60328 96 aa1.21□□□□□ -2.22
PVT1-202ENST00000512617 KRTAP4-1Q9BYQ7 146 aa1.21□□□□□ -2.22
PVT1-202ENST00000512617 CRCT1Q9UGL9 99 aa1.21□□□□□ -2.22
PVT1-202ENST00000512617 RPS29P62273 56 aaKnown RBP1.2□□□□□ -2.22
PVT1-202ENST00000512617 KRTAP19-2Q3LHN2 52 aa1.2□□□□□ -2.22
PVT1-202ENST00000512617 SPINK1P00995 79 aa1.19□□□□□ -2.22
PVT1-202ENST00000512617 MMP24-AS1A0A0U1RRL7 71 aa1.17□□□□□ -2.22
PVT1-202ENST00000512617 FSIP2Q5CZC0 6907 aa1.17□□□□□ -2.22
PVT1-202ENST00000512617 MT1HP80294 61 aa1.16□□□□□ -2.22
PVT1-202ENST00000512617 OBSCNQ5VST9 7968 aa1.16□□□□□ -2.22
PVT1-202ENST00000512617 HMCN1Q96RW7 5635 aa1.15□□□□□ -2.22
PVT1-202ENST00000512617 KRTAP9-6A8MVA2 160 aa1.15□□□□□ -2.23
PVT1-202ENST00000512617 FLGP20930 4061 aaPredicted RBP1.14□□□□□ -2.23
PVT1-202ENST00000512617 C9orf92A6NGG3 77 aa1.13□□□□□ -2.23
PVT1-202ENST00000512617 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
PVT1-202ENST00000512617 KRTAP4-3Q9BYR4 195 aa1.12□□□□□ -2.23
PVT1-202ENST00000512617 USH2AO75445 5202 aa1.12□□□□□ -2.23
PVT1-202ENST00000512617 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
PVT1-202ENST00000512617 MT2AP02795 61 aa1.07□□□□□ -2.24
PVT1-202ENST00000512617 MT1FP04733 61 aa1.07□□□□□ -2.24
PVT1-202ENST00000512617 M0R2T5 61 aa1.06□□□□□ -2.24
PVT1-202ENST00000512617 FCGBPQ9Y6R7 5405 aaPredicted RBP1.06□□□□□ -2.24
PVT1-202ENST00000512617 S4R3F8 94 aa1.05□□□□□ -2.24
PVT1-202ENST00000512617 MACF1Q9UPN3 7388 aaKnown RBP1.04□□□□□ -2.24
PVT1-202ENST00000512617 KRTAP20-1Q3LI63 56 aa1.03□□□□□ -2.24
PVT1-202ENST00000512617 KRTAP19-6Q3LI70 58 aa1.03□□□□□ -2.24
PVT1-202ENST00000512617 MT1BP07438 61 aa0.99□□□□□ -2.25
PVT1-202ENST00000512617 LCE3AQ5TA76 89 aa0.99□□□□□ -2.25
PVT1-202ENST00000512617 NEBP20929 6669 aa0.99□□□□□ -2.25
PVT1-202ENST00000512617 GPR98Q8WXG9 6306 aa0.98□□□□□ -2.25
PVT1-202ENST00000512617 KRTAP19-8Q3LI54 63 aa0.98□□□□□ -2.25
PVT1-202ENST00000512617 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
PVT1-202ENST00000512617 MUC12Q9UKN1 5478 aa0.98□□□□□ -2.25
PVT1-202ENST00000512617 SPRR2GQ9BYE4 73 aa0.97□□□□□ -2.25
PVT1-202ENST00000512617 M0QZ58 72 aa0.95□□□□□ -2.26
PVT1-202ENST00000512617 KMT2DO14686 5537 aa0.93□□□□□ -2.26
PVT1-202ENST00000512617 KRTAP2-3P0C7H8 128 aa0.93□□□□□ -2.26
PVT1-202ENST00000512617 KRTAP2-4Q9BYR9 128 aa0.93□□□□□ -2.26
PVT1-202ENST00000512617 KRTAP5-5Q701N2 237 aaPredicted RBP0.92□□□□□ -2.26
PVT1-202ENST00000512617 MDN1Q9NU22 5596 aa0.91□□□□□ -2.26
PVT1-202ENST00000512617 MT1XP80297 61 aa0.91□□□□□ -2.26
PVT1-202ENST00000512617 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
PVT1-202ENST00000512617 LCE1BQ5T7P3 118 aa0.9□□□□□ -2.27
PVT1-202ENST00000512617 KRTAP2-1Q9BYU5 128 aa0.89□□□□□ -2.27
PVT1-202ENST00000512617 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
PVT1-202ENST00000512617 SPRR2EP22531 72 aa0.86□□□□□ -2.27
PVT1-202ENST00000512617 SPRR2BP35325 72 aa0.86□□□□□ -2.27
PVT1-202ENST00000512617 SPRR2AP35326 72 aa0.86□□□□□ -2.27
PVT1-202ENST00000512617 KRTAP5-7Q6L8G8 165 aa0.86□□□□□ -2.27
PVT1-202ENST00000512617 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
PVT1-202ENST00000512617 AHNAK2Q8IVF2 5795 aa0.85□□□□□ -2.27
PVT1-202ENST00000512617 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
PVT1-202ENST00000512617 SPRR2DP22532 72 aa0.83□□□□□ -2.28
PVT1-202ENST00000512617 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
PVT1-202ENST00000512617 TNP1P09430 55 aa0.82□□□□□ -2.28
PVT1-202ENST00000512617 KRTAP19-7Q3SYF9 63 aa0.82□□□□□ -2.28
PVT1-202ENST00000512617 MT1EP04732 61 aa0.81□□□□□ -2.28
PVT1-202ENST00000512617 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
PVT1-202ENST00000512617 AHNAKQ09666 5890 aaKnown RBP0.79□□□□□ -2.28
PVT1-202ENST00000512617 PRM1P04553 51 aa0.77□□□□□ -2.29
PVT1-202ENST00000512617 MT1GP13640 62 aa0.77□□□□□ -2.29
PVT1-202ENST00000512617 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
PVT1-202ENST00000512617 MT1MQ8N339 61 aa0.77□□□□□ -2.29
PVT1-202ENST00000512617 MT1LQ93083 61 aa0.77□□□□□ -2.29
PVT1-202ENST00000512617 MUC5BQ9HC84 5762 aaPredicted RBP0.74□□□□□ -2.29
PVT1-202ENST00000512617 MT4P47944 62 aa0.73□□□□□ -2.29
PVT1-202ENST00000512617 MUC5ACP98088 5654 aa0.73□□□□□ -2.29
PVT1-202ENST00000512617 KRTAP20-2Q3LI61 65 aa0.71□□□□□ -2.3
PVT1-202ENST00000512617 SYNE1Q8NF91 8797 aaKnown RBP0.69□□□□□ -2.3
PVT1-202ENST00000512617 MUC19Q7Z5P9 8384 aa0.66□□□□□ -2.3
PVT1-202ENST00000512617 MT1AP04731 61 aa0.65□□□□□ -2.31
PVT1-202ENST00000512617 KRTAP6-1Q3LI64 71 aa0.65□□□□□ -2.31
PVT1-202ENST00000512617 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
PVT1-202ENST00000512617 KRTAP21-2Q3LI59 83 aa0.62□□□□□ -2.31
PVT1-202ENST00000512617 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
PVT1-202ENST00000512617 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
PVT1-202ENST00000512617 MUC16Q8WXI7 14507 aa0.32□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 15.7 ms