RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 M0QZ58 72 aa3.11□□□□□ -1.91
RFC1-213ENST00000512275 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
RFC1-213ENST00000512275 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.91
RFC1-213ENST00000512275 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
RFC1-213ENST00000512275 LINC01554Q52M75 96 aa3.07□□□□□ -1.92
RFC1-213ENST00000512275 UQCR11O14957 56 aa3.06□□□□□ -1.92
RFC1-213ENST00000512275 A0A0D9SG42 100 aa3.05□□□□□ -1.92
RFC1-213ENST00000512275 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
RFC1-213ENST00000512275 MIR22HGQ0VDD5 57 aa3.04□□□□□ -1.92
RFC1-213ENST00000512275 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
RFC1-213ENST00000512275 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
RFC1-213ENST00000512275 BRK1Q8WUW1 75 aa2.98□□□□□ -1.93
RFC1-213ENST00000512275 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
RFC1-213ENST00000512275 MT1BP07438 61 aa2.97□□□□□ -1.93
RFC1-213ENST00000512275 USH2AO75445 5202 aa2.97□□□□□ -1.93
RFC1-213ENST00000512275 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
RFC1-213ENST00000512275 A6NN06 94 aa2.94□□□□□ -1.94
RFC1-213ENST00000512275 PLAC4Q8WY50 150 aa2.94□□□□□ -1.94
RFC1-213ENST00000512275 FSIP2Q5CZC0 6907 aa2.93□□□□□ -1.94
RFC1-213ENST00000512275 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
RFC1-213ENST00000512275 MT1XP80297 61 aa2.85□□□□□ -1.95
RFC1-213ENST00000512275 KRTAP6-3Q3LI67 103 aa2.85□□□□□ -1.95
RFC1-213ENST00000512275 PMAIP1Q13794 54 aa2.84□□□□□ -1.95
RFC1-213ENST00000512275 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
RFC1-213ENST00000512275 C10orf95Q9H7T3 257 aa2.82□□□□□ -1.96
RFC1-213ENST00000512275 PRO2289Q9P1D8 64 aa2.82□□□□□ -1.96
RFC1-213ENST00000512275 CRCT1Q9UGL9 99 aa2.8□□□□□ -1.96
RFC1-213ENST00000512275 ROMO1P60602 79 aa2.78□□□□□ -1.96
RFC1-213ENST00000512275 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
RFC1-213ENST00000512275 TNP1P09430 55 aa2.73□□□□□ -1.97
RFC1-213ENST00000512275 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
RFC1-213ENST00000512275 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
RFC1-213ENST00000512275 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
RFC1-213ENST00000512275 KMT2DO14686 5537 aa2.63□□□□□ -1.99
RFC1-213ENST00000512275 KRTAP12-3P60328 96 aa2.62□□□□□ -1.99
RFC1-213ENST00000512275 KRTAP8-1Q8IUC2 63 aa2.61□□□□□ -1.99
RFC1-213ENST00000512275 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
RFC1-213ENST00000512275 KRTAP19-5Q3LI72 72 aa2.57□□□□□ -2
RFC1-213ENST00000512275 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
RFC1-213ENST00000512275 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
RFC1-213ENST00000512275 SPRR2FQ96RM1 72 aa2.54□□□□□ -2
RFC1-213ENST00000512275 MT1EP04732 61 aa2.51□□□□□ -2.01
RFC1-213ENST00000512275 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
RFC1-213ENST00000512275 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
RFC1-213ENST00000512275 NEBP20929 6669 aa2.47□□□□□ -2.01
RFC1-213ENST00000512275 MT1LQ93083 61 aa2.45□□□□□ -2.02
RFC1-213ENST00000512275 SPRR2EP22531 72 aa2.43□□□□□ -2.02
RFC1-213ENST00000512275 SPRR2BP35325 72 aa2.43□□□□□ -2.02
RFC1-213ENST00000512275 SPRR2AP35326 72 aa2.43□□□□□ -2.02
RFC1-213ENST00000512275 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
RFC1-213ENST00000512275 MDN1Q9NU22 5596 aa2.39□□□□□ -2.03
RFC1-213ENST00000512275 MT1GP13640 62 aa2.38□□□□□ -2.03
RFC1-213ENST00000512275 MT1MQ8N339 61 aa2.37□□□□□ -2.03
RFC1-213ENST00000512275 SPRR2DP22532 72 aa2.35□□□□□ -2.03
RFC1-213ENST00000512275 KRTAP21-2Q3LI59 83 aa2.29□□□□□ -2.04
RFC1-213ENST00000512275 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.05
RFC1-213ENST00000512275 KRTAP20-1Q3LI63 56 aa2.21□□□□□ -2.06
RFC1-213ENST00000512275 KRTAP2-3P0C7H8 128 aa2.2□□□□□ -2.06
RFC1-213ENST00000512275 KRTAP2-4Q9BYR9 128 aa2.2□□□□□ -2.06
RFC1-213ENST00000512275 KRTAP2-1Q9BYU5 128 aa2.14□□□□□ -2.07
RFC1-213ENST00000512275 MT1AP04731 61 aa2.08□□□□□ -2.08
RFC1-213ENST00000512275 KRTAP6-1Q3LI64 71 aa2.07□□□□□ -2.08
RFC1-213ENST00000512275 SYNE1Q8NF91 8797 aaKnown RBP2.06□□□□□ -2.08
RFC1-213ENST00000512275 MT4P47944 62 aa2.05□□□□□ -2.08
RFC1-213ENST00000512275 HMCN1Q96RW7 5635 aa1.97□□□□□ -2.09
RFC1-213ENST00000512275 INE1O15225 51 aa1.95□□□□□ -2.1
RFC1-213ENST00000512275 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
RFC1-213ENST00000512275 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
RFC1-213ENST00000512275 GPR98Q8WXG9 6306 aa1.82□□□□□ -2.12
RFC1-213ENST00000512275 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
RFC1-213ENST00000512275 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
RFC1-213ENST00000512275 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
RFC1-213ENST00000512275 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
RFC1-213ENST00000512275 PRM1P04553 51 aa1.47□□□□□ -2.17
RFC1-213ENST00000512275 AHNAKQ09666 5890 aaKnown RBP1.43□□□□□ -2.18
RFC1-213ENST00000512275 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
RFC1-213ENST00000512275 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
RFC1-213ENST00000512275 KRTAP21-1Q3LI58 79 aa0.85□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 65 ms