RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
LINC01088-209ENST00000512130 KIAA1109Q2LD37 5005 aa0.98□□□□□ -2.25
LINC01088-209ENST00000512130 HSPG2P98160 4391 aa0.98□□□□□ -2.25
LINC01088-209ENST00000512130 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
LINC01088-209ENST00000512130 S4R3F8 94 aa0.97□□□□□ -2.25
LINC01088-209ENST00000512130 RYR3Q15413 4870 aa0.97□□□□□ -2.25
LINC01088-209ENST00000512130 M0QZ58 72 aa0.96□□□□□ -2.26
LINC01088-209ENST00000512130 MYCBP2O75592 4640 aa0.96□□□□□ -2.26
LINC01088-209ENST00000512130 FAT3Q8TDW7 4589 aa0.95□□□□□ -2.26
LINC01088-209ENST00000512130 LRP1Q07954 4544 aaKnown RBP0.95□□□□□ -2.26
LINC01088-209ENST00000512130 CRIPTQ9P021 101 aa0.94□□□□□ -2.26
LINC01088-209ENST00000512130 EPPK1P58107 5090 aaKnown RBP0.94□□□□□ -2.26
LINC01088-209ENST00000512130 AHNAK2Q8IVF2 5795 aa0.94□□□□□ -2.26
LINC01088-209ENST00000512130 BIRC6Q9NR09 4857 aa0.93□□□□□ -2.26
LINC01088-209ENST00000512130 HERC2O95714 4834 aa0.92□□□□□ -2.26
LINC01088-209ENST00000512130 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
LINC01088-209ENST00000512130 ABCA13Q86UQ4 5058 aa0.91□□□□□ -2.26
LINC01088-209ENST00000512130 KRTAP19-2Q3LHN2 52 aa0.9□□□□□ -2.27
LINC01088-209ENST00000512130 PCLOQ9Y6V0 5065 aa0.89□□□□□ -2.27
LINC01088-209ENST00000512130 LRP2P98164 4655 aa0.89□□□□□ -2.27
LINC01088-209ENST00000512130 MUC17Q685J3 4493 aa0.89□□□□□ -2.27
LINC01088-209ENST00000512130 HMCN2Q8NDA2 5059 aa0.89□□□□□ -2.27
LINC01088-209ENST00000512130 FLGP20930 4061 aaPredicted RBP0.89□□□□□ -2.27
LINC01088-209ENST00000512130 UBR4Q5T4S7 5183 aa0.88□□□□□ -2.27
LINC01088-209ENST00000512130 SPRR2GQ9BYE4 73 aa0.87□□□□□ -2.27
LINC01088-209ENST00000512130 MUC2Q02817 5179 aa0.87□□□□□ -2.27
LINC01088-209ENST00000512130 LPAP08519 4548 aa0.86□□□□□ -2.27
LINC01088-209ENST00000512130 HERC1Q15751 4861 aa0.85□□□□□ -2.27
LINC01088-209ENST00000512130 TNP1P09430 55 aa0.84□□□□□ -2.27
LINC01088-209ENST00000512130 MT1HP80294 61 aa0.84□□□□□ -2.27
LINC01088-209ENST00000512130 KRTAP19-8Q3LI54 63 aa0.84□□□□□ -2.27
LINC01088-209ENST00000512130 RNF213Q63HN8 5207 aa0.83□□□□□ -2.28
LINC01088-209ENST00000512130 M0R2T5 61 aa0.82□□□□□ -2.28
LINC01088-209ENST00000512130 MT2AP02795 61 aa0.81□□□□□ -2.28
LINC01088-209ENST00000512130 FAT4Q6V0I7 4981 aa0.8□□□□□ -2.28
LINC01088-209ENST00000512130 MT1FP04733 61 aa0.79□□□□□ -2.28
LINC01088-209ENST00000512130 KRTAP8-1Q8IUC2 63 aa0.79□□□□□ -2.28
LINC01088-209ENST00000512130 MT1BP07438 61 aa0.78□□□□□ -2.28
LINC01088-209ENST00000512130 MT1XP80297 61 aa0.76□□□□□ -2.29
LINC01088-209ENST00000512130 KRTAP21-1Q3LI58 79 aa0.75□□□□□ -2.29
LINC01088-209ENST00000512130 KRTAP19-6Q3LI70 58 aa0.74□□□□□ -2.29
LINC01088-209ENST00000512130 USH2AO75445 5202 aa0.72□□□□□ -2.29
LINC01088-209ENST00000512130 KRTAP2-3P0C7H8 128 aa0.69□□□□□ -2.3
LINC01088-209ENST00000512130 KRTAP19-7Q3SYF9 63 aa0.69□□□□□ -2.3
LINC01088-209ENST00000512130 KRTAP2-4Q9BYR9 128 aa0.69□□□□□ -2.3
LINC01088-209ENST00000512130 KRTAP2-1Q9BYU5 128 aa0.69□□□□□ -2.3
LINC01088-209ENST00000512130 MT1EP04732 61 aa0.68□□□□□ -2.3
LINC01088-209ENST00000512130 MT1GP13640 62 aa0.67□□□□□ -2.3
LINC01088-209ENST00000512130 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
LINC01088-209ENST00000512130 MT1LQ93083 61 aa0.67□□□□□ -2.3
LINC01088-209ENST00000512130 SSPOA2VEC9 5147 aa0.67□□□□□ -2.3
LINC01088-209ENST00000512130 KMT2DO14686 5537 aa0.65□□□□□ -2.31
LINC01088-209ENST00000512130 MT1MQ8N339 61 aa0.63□□□□□ -2.31
LINC01088-209ENST00000512130 MDN1Q9NU22 5596 aa0.62□□□□□ -2.31
LINC01088-209ENST00000512130 FSIP2Q5CZC0 6907 aa0.61□□□□□ -2.31
LINC01088-209ENST00000512130 SPRR2FQ96RM1 72 aa0.61□□□□□ -2.31
LINC01088-209ENST00000512130 MUC12Q9UKN1 5478 aa0.59□□□□□ -2.31
LINC01088-209ENST00000512130 MACF1Q9UPN3 7388 aaKnown RBP0.59□□□□□ -2.31
LINC01088-209ENST00000512130 MT1AP04731 61 aa0.59□□□□□ -2.31
LINC01088-209ENST00000512130 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
LINC01088-209ENST00000512130 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
LINC01088-209ENST00000512130 SPRR2EP22531 72 aa0.57□□□□□ -2.32
LINC01088-209ENST00000512130 SPRR2BP35325 72 aa0.57□□□□□ -2.32
LINC01088-209ENST00000512130 SPRR2AP35326 72 aa0.57□□□□□ -2.32
LINC01088-209ENST00000512130 DSTQ03001 7570 aaKnown RBP0.57□□□□□ -2.32
LINC01088-209ENST00000512130 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
LINC01088-209ENST00000512130 SPRR2DP22532 72 aa0.55□□□□□ -2.32
LINC01088-209ENST00000512130 KRTAP6-1Q3LI64 71 aa0.53□□□□□ -2.32
LINC01088-209ENST00000512130 NEBP20929 6669 aa0.53□□□□□ -2.33
LINC01088-209ENST00000512130 SYNE1Q8NF91 8797 aaKnown RBP0.52□□□□□ -2.33
LINC01088-209ENST00000512130 KRTAP20-1Q3LI63 56 aa0.51□□□□□ -2.33
LINC01088-209ENST00000512130 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
LINC01088-209ENST00000512130 KRTAP20-2Q3LI61 65 aa0.49□□□□□ -2.33
LINC01088-209ENST00000512130 KRTAP6-2Q3LI66 62 aa0.48□□□□□ -2.33
LINC01088-209ENST00000512130 PRM1P04553 51 aa0.44□□□□□ -2.34
LINC01088-209ENST00000512130 MT4P47944 62 aa0.43□□□□□ -2.34
LINC01088-209ENST00000512130 MUC5ACP98088 5654 aa0.42□□□□□ -2.34
LINC01088-209ENST00000512130 GPR98Q8WXG9 6306 aa0.31□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 111.2 ms