RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
NR1I3-230ENST00000511944 PRO2289Q9P1D8 64 aa3.82□□□□□ -1.8
NR1I3-230ENST00000511944 KRTAP25-1Q3LHN0 102 aa3.78□□□□□ -1.8
NR1I3-230ENST00000511944 USH2AO75445 5202 aa3.77□□□□□ -1.81
NR1I3-230ENST00000511944 C10orf95Q9H7T3 257 aa3.77□□□□□ -1.81
NR1I3-230ENST00000511944 MT1XP80297 61 aa3.76□□□□□ -1.81
NR1I3-230ENST00000511944 TNP1P09430 55 aa3.74□□□□□ -1.81
NR1I3-230ENST00000511944 KRTAP19-6Q3LI70 58 aa3.72□□□□□ -1.81
NR1I3-230ENST00000511944 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
NR1I3-230ENST00000511944 LCE3EQ5T5B0 92 aa3.67□□□□□ -1.82
NR1I3-230ENST00000511944 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
NR1I3-230ENST00000511944 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
NR1I3-230ENST00000511944 KRTAP8-1Q8IUC2 63 aa3.53□□□□□ -1.84
NR1I3-230ENST00000511944 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
NR1I3-230ENST00000511944 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
NR1I3-230ENST00000511944 LCE3AQ5TA76 89 aa3.51□□□□□ -1.85
NR1I3-230ENST00000511944 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
NR1I3-230ENST00000511944 KRTAP12-3P60328 96 aa3.42□□□□□ -1.86
NR1I3-230ENST00000511944 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
NR1I3-230ENST00000511944 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
NR1I3-230ENST00000511944 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
NR1I3-230ENST00000511944 KMT2DO14686 5537 aa3.34□□□□□ -1.87
NR1I3-230ENST00000511944 MACF1Q9UPN3 7388 aaKnown RBP3.34□□□□□ -1.88
NR1I3-230ENST00000511944 MT1EP04732 61 aa3.31□□□□□ -1.88
NR1I3-230ENST00000511944 KRTAP5-9P26371 169 aa3.3□□□□□ -1.88
NR1I3-230ENST00000511944 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
NR1I3-230ENST00000511944 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
NR1I3-230ENST00000511944 MT1LQ93083 61 aa3.24□□□□□ -1.89
NR1I3-230ENST00000511944 SPRR2FQ96RM1 72 aa3.23□□□□□ -1.89
NR1I3-230ENST00000511944 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
NR1I3-230ENST00000511944 OBSCNQ5VST9 7968 aa3.21□□□□□ -1.9
NR1I3-230ENST00000511944 MT1GP13640 62 aa3.2□□□□□ -1.9
NR1I3-230ENST00000511944 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
NR1I3-230ENST00000511944 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
NR1I3-230ENST00000511944 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
NR1I3-230ENST00000511944 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
NR1I3-230ENST00000511944 MT1MQ8N339 61 aa3.11□□□□□ -1.91
NR1I3-230ENST00000511944 SPRR2EP22531 72 aa3.09□□□□□ -1.91
NR1I3-230ENST00000511944 SPRR2BP35325 72 aa3.09□□□□□ -1.91
NR1I3-230ENST00000511944 SPRR2AP35326 72 aa3.09□□□□□ -1.91
NR1I3-230ENST00000511944 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
NR1I3-230ENST00000511944 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
NR1I3-230ENST00000511944 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
NR1I3-230ENST00000511944 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
NR1I3-230ENST00000511944 NEBP20929 6669 aa3□□□□□ -1.93
NR1I3-230ENST00000511944 SPRR2DP22532 72 aa2.98□□□□□ -1.93
NR1I3-230ENST00000511944 DSTQ03001 7570 aaKnown RBP2.86□□□□□ -1.95
NR1I3-230ENST00000511944 KRTAP2-3P0C7H8 128 aa2.83□□□□□ -1.96
NR1I3-230ENST00000511944 KRTAP2-4Q9BYR9 128 aa2.83□□□□□ -1.96
NR1I3-230ENST00000511944 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
NR1I3-230ENST00000511944 MT1AP04731 61 aa2.78□□□□□ -1.96
NR1I3-230ENST00000511944 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
NR1I3-230ENST00000511944 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
NR1I3-230ENST00000511944 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
NR1I3-230ENST00000511944 KRTAP6-1Q3LI64 71 aa2.69□□□□□ -1.98
NR1I3-230ENST00000511944 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
NR1I3-230ENST00000511944 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
NR1I3-230ENST00000511944 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
NR1I3-230ENST00000511944 SYNE1Q8NF91 8797 aaKnown RBP2.53□□□□□ -2
NR1I3-230ENST00000511944 KRTAP20-2Q3LI61 65 aa2.53□□□□□ -2
NR1I3-230ENST00000511944 MT4P47944 62 aa2.52□□□□□ -2.01
NR1I3-230ENST00000511944 INE1O15225 51 aa2.51□□□□□ -2.01
NR1I3-230ENST00000511944 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
NR1I3-230ENST00000511944 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
NR1I3-230ENST00000511944 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
NR1I3-230ENST00000511944 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
NR1I3-230ENST00000511944 KRTAP5-10Q6L8G5 202 aa2.15□□□□□ -2.07
NR1I3-230ENST00000511944 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
NR1I3-230ENST00000511944 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
NR1I3-230ENST00000511944 MUC5ACP98088 5654 aa2.07□□□□□ -2.08
NR1I3-230ENST00000511944 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
NR1I3-230ENST00000511944 PRM1P04553 51 aa1.96□□□□□ -2.1
NR1I3-230ENST00000511944 MUC5BQ9HC84 5762 aaPredicted RBP1.89□□□□□ -2.11
NR1I3-230ENST00000511944 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
NR1I3-230ENST00000511944 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
NR1I3-230ENST00000511944 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
NR1I3-230ENST00000511944 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 122.6 ms