RNA–Protein interactions for RNA: ENST00000511810.5

SDHA-214, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 3,001 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-214ENST00000511810 KRTAP4-8A0A0G2JLE6 195 aa3.82□□□□□ -1.8
SDHA-214ENST00000511810 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
SDHA-214ENST00000511810 FSIP2Q5CZC0 6907 aa3.77□□□□□ -1.81
SDHA-214ENST00000511810 SSPOA2VEC9 5147 aa3.75□□□□□ -1.81
SDHA-214ENST00000511810 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
SDHA-214ENST00000511810 KRTAP19-6Q3LI70 58 aa3.7□□□□□ -1.82
SDHA-214ENST00000511810 KRTAP19-7Q3SYF9 63 aa3.68□□□□□ -1.82
SDHA-214ENST00000511810 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
SDHA-214ENST00000511810 MT3P25713 68 aa3.66□□□□□ -1.82
SDHA-214ENST00000511810 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
SDHA-214ENST00000511810 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
SDHA-214ENST00000511810 KRTAP4-11Q9BYQ6 195 aa3.61□□□□□ -1.83
SDHA-214ENST00000511810 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
SDHA-214ENST00000511810 MT1EP04732 61 aa3.57□□□□□ -1.84
SDHA-214ENST00000511810 FCGBPQ9Y6R7 5405 aaPredicted RBP3.56□□□□□ -1.84
SDHA-214ENST00000511810 MT1LQ93083 61 aa3.54□□□□□ -1.84
SDHA-214ENST00000511810 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
SDHA-214ENST00000511810 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
SDHA-214ENST00000511810 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
SDHA-214ENST00000511810 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
SDHA-214ENST00000511810 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
SDHA-214ENST00000511810 KRTAP19-3Q7Z4W3 81 aa3.38□□□□□ -1.87
SDHA-214ENST00000511810 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
SDHA-214ENST00000511810 MT1MQ8N339 61 aa3.36□□□□□ -1.87
SDHA-214ENST00000511810 MT1GP13640 62 aa3.34□□□□□ -1.87
SDHA-214ENST00000511810 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
SDHA-214ENST00000511810 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
SDHA-214ENST00000511810 KRTAP2-3P0C7H8 128 aa3.27□□□□□ -1.89
SDHA-214ENST00000511810 KRTAP2-4Q9BYR9 128 aa3.27□□□□□ -1.89
SDHA-214ENST00000511810 KRTAP2-1Q9BYU5 128 aa3.27□□□□□ -1.89
SDHA-214ENST00000511810 KRTAP6-3Q3LI67 103 aa3.25□□□□□ -1.89
SDHA-214ENST00000511810 MDN1Q9NU22 5596 aa3.19□□□□□ -1.9
SDHA-214ENST00000511810 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
SDHA-214ENST00000511810 INE1O15225 51 aa3.17□□□□□ -1.9
SDHA-214ENST00000511810 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
SDHA-214ENST00000511810 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SDHA-214ENST00000511810 SPRR2EP22531 72 aa3.11□□□□□ -1.91
SDHA-214ENST00000511810 SPRR2BP35325 72 aa3.11□□□□□ -1.91
SDHA-214ENST00000511810 SPRR2AP35326 72 aa3.11□□□□□ -1.91
SDHA-214ENST00000511810 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
SDHA-214ENST00000511810 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
SDHA-214ENST00000511810 KRTAP6-1Q3LI64 71 aa3.02□□□□□ -1.93
SDHA-214ENST00000511810 SPRR2DP22532 72 aa2.98□□□□□ -1.93
SDHA-214ENST00000511810 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
SDHA-214ENST00000511810 MT1AP04731 61 aa2.98□□□□□ -1.93
SDHA-214ENST00000511810 NEBP20929 6669 aa2.96□□□□□ -1.94
SDHA-214ENST00000511810 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SDHA-214ENST00000511810 KRTAP5-3Q6L8H2 238 aa2.94□□□□□ -1.94
SDHA-214ENST00000511810 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
SDHA-214ENST00000511810 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
SDHA-214ENST00000511810 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
SDHA-214ENST00000511810 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
SDHA-214ENST00000511810 KRTAP5-4Q6L8H1 288 aa2.71□□□□□ -1.98
SDHA-214ENST00000511810 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
SDHA-214ENST00000511810 KRTAP5-7Q6L8G8 165 aa2.7□□□□□ -1.98
SDHA-214ENST00000511810 MT4P47944 62 aa2.65□□□□□ -1.99
SDHA-214ENST00000511810 GPR98Q8WXG9 6306 aa2.65□□□□□ -1.99
SDHA-214ENST00000511810 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
SDHA-214ENST00000511810 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
SDHA-214ENST00000511810 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SDHA-214ENST00000511810 PRM1P04553 51 aa2.51□□□□□ -2.01
SDHA-214ENST00000511810 HMCN1Q96RW7 5635 aa2.5□□□□□ -2.01
SDHA-214ENST00000511810 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
SDHA-214ENST00000511810 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
SDHA-214ENST00000511810 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
SDHA-214ENST00000511810 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
SDHA-214ENST00000511810 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.05
SDHA-214ENST00000511810 MUC5ACP98088 5654 aa2.23□□□□□ -2.05
SDHA-214ENST00000511810 LCE1BQ5T7P3 118 aa2.22□□□□□ -2.05
SDHA-214ENST00000511810 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
SDHA-214ENST00000511810 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
SDHA-214ENST00000511810 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
SDHA-214ENST00000511810 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
SDHA-214ENST00000511810 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
SDHA-214ENST00000511810 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
SDHA-214ENST00000511810 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
SDHA-214ENST00000511810 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
SDHA-214ENST00000511810 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 128 ms