RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
COL1A1-213ENST00000511732 RPS28P62857 69 aaKnown RBP5.42□□□□□ -1.54
COL1A1-213ENST00000511732 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
COL1A1-213ENST00000511732 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
COL1A1-213ENST00000511732 C10orf95Q9H7T3 257 aa5.39□□□□□ -1.55
COL1A1-213ENST00000511732 LCE4AQ5TA78 99 aa5.37□□□□□ -1.55
COL1A1-213ENST00000511732 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
COL1A1-213ENST00000511732 MT4P47944 62 aa5.35□□□□□ -1.55
COL1A1-213ENST00000511732 PSPHP1O15172 72 aa5.34□□□□□ -1.55
COL1A1-213ENST00000511732 TNP1P09430 55 aa5.33□□□□□ -1.56
COL1A1-213ENST00000511732 Q1T7F1 81 aa5.33□□□□□ -1.56
COL1A1-213ENST00000511732 UQCR11O14957 56 aa5.31□□□□□ -1.56
COL1A1-213ENST00000511732 HMCN1Q96RW7 5635 aa5.31□□□□□ -1.56
COL1A1-213ENST00000511732 KRTAP5-4Q6L8H1 288 aa5.28□□□□□ -1.56
COL1A1-213ENST00000511732 A6NED7 52 aa5.24□□□□□ -1.57
COL1A1-213ENST00000511732 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
COL1A1-213ENST00000511732 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
COL1A1-213ENST00000511732 KRTAP4-7Q9BYR0 210 aa5.21□□□□□ -1.58
COL1A1-213ENST00000511732 K7ERS5 55 aa5.19□□□□□ -1.58
COL1A1-213ENST00000511732 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
COL1A1-213ENST00000511732 AHNAK2Q8IVF2 5795 aa5.15□□□□□ -1.59
COL1A1-213ENST00000511732 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
COL1A1-213ENST00000511732 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
COL1A1-213ENST00000511732 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
COL1A1-213ENST00000511732 KRTAP20-2Q3LI61 65 aa4.98□□□□□ -1.61
COL1A1-213ENST00000511732 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
COL1A1-213ENST00000511732 BRK1Q8WUW1 75 aa4.96□□□□□ -1.62
COL1A1-213ENST00000511732 KRTAP25-1Q3LHN0 102 aa4.95□□□□□ -1.62
COL1A1-213ENST00000511732 LOC100996750A0A140TA64 210 aa4.94□□□□□ -1.62
COL1A1-213ENST00000511732 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
COL1A1-213ENST00000511732 KRTAP5-7Q6L8G8 165 aa4.91□□□□□ -1.62
COL1A1-213ENST00000511732 SYNE1Q8NF91 8797 aaKnown RBP4.9□□□□□ -1.62
COL1A1-213ENST00000511732 KRTAP12-4P60329 112 aa4.87□□□□□ -1.63
COL1A1-213ENST00000511732 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
COL1A1-213ENST00000511732 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
COL1A1-213ENST00000511732 ROMO1P60602 79 aa4.77□□□□□ -1.65
COL1A1-213ENST00000511732 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
COL1A1-213ENST00000511732 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
COL1A1-213ENST00000511732 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
COL1A1-213ENST00000511732 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
COL1A1-213ENST00000511732 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
COL1A1-213ENST00000511732 MT1AP04731 61 aa4.62□□□□□ -1.67
COL1A1-213ENST00000511732 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
COL1A1-213ENST00000511732 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
COL1A1-213ENST00000511732 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
COL1A1-213ENST00000511732 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
COL1A1-213ENST00000511732 KRTAP5-8O75690 187 aa4.45□□□□□ -1.7
COL1A1-213ENST00000511732 KRTAP6-2Q3LI66 62 aa4.43□□□□□ -1.7
COL1A1-213ENST00000511732 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
COL1A1-213ENST00000511732 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
COL1A1-213ENST00000511732 KTN1-AS1Q86SY8 53 aa4.33□□□□□ -1.72
COL1A1-213ENST00000511732 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
COL1A1-213ENST00000511732 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
COL1A1-213ENST00000511732 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
COL1A1-213ENST00000511732 MUC5ACP98088 5654 aa4.24□□□□□ -1.73
COL1A1-213ENST00000511732 MT3P25713 68 aa4.21□□□□□ -1.74
COL1A1-213ENST00000511732 KRTAP9-9Q9BYP9 154 aa4.19□□□□□ -1.74
COL1A1-213ENST00000511732 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
COL1A1-213ENST00000511732 LCE1EQ5T753 118 aa3.9□□□□□ -1.79
COL1A1-213ENST00000511732 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
COL1A1-213ENST00000511732 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
COL1A1-213ENST00000511732 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
COL1A1-213ENST00000511732 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
COL1A1-213ENST00000511732 LCE1CQ5T751 118 aa3.62□□□□□ -1.83
COL1A1-213ENST00000511732 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
COL1A1-213ENST00000511732 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
COL1A1-213ENST00000511732 KRTAP5-11Q6L8G4 156 aa3.3□□□□□ -1.88
COL1A1-213ENST00000511732 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
COL1A1-213ENST00000511732 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
COL1A1-213ENST00000511732 LCE3EQ5T5B0 92 aa3.16□□□□□ -1.9
COL1A1-213ENST00000511732 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
COL1A1-213ENST00000511732 PHGR1C9JFL3 82 aa2.97□□□□□ -1.93
COL1A1-213ENST00000511732 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
COL1A1-213ENST00000511732 INE1O15225 51 aa2.79□□□□□ -1.96
COL1A1-213ENST00000511732 MUC19Q7Z5P9 8384 aa2.7□□□□□ -1.98
COL1A1-213ENST00000511732 PRM1P04553 51 aa2.45□□□□□ -2.02
COL1A1-213ENST00000511732 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
COL1A1-213ENST00000511732 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 72.8 ms