RNA–Protein interactions for RNA: ENST00000511600.5

RNF4-214, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF4, Length 4,123 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-214ENST00000511600 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
RNF4-214ENST00000511600 KRTAP20-1Q3LI63 56 aa2.46□□□□□ -2.02
RNF4-214ENST00000511600 MT1XP80297 61 aa2.45□□□□□ -2.02
RNF4-214ENST00000511600 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
RNF4-214ENST00000511600 LCE1DQ5T752 114 aa2.42□□□□□ -2.02
RNF4-214ENST00000511600 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
RNF4-214ENST00000511600 USH2AO75445 5202 aa2.39□□□□□ -2.03
RNF4-214ENST00000511600 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
RNF4-214ENST00000511600 SYNE2Q8WXH0 6885 aaKnown RBP2.39□□□□□ -2.03
RNF4-214ENST00000511600 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
RNF4-214ENST00000511600 KRTAP4-8A0A0G2JLE6 195 aa2.38□□□□□ -2.03
RNF4-214ENST00000511600 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
RNF4-214ENST00000511600 SPRR2EP22531 72 aa2.36□□□□□ -2.03
RNF4-214ENST00000511600 SPRR2BP35325 72 aa2.36□□□□□ -2.03
RNF4-214ENST00000511600 SPRR2AP35326 72 aa2.36□□□□□ -2.03
RNF4-214ENST00000511600 SSPOA2VEC9 5147 aa2.35□□□□□ -2.03
RNF4-214ENST00000511600 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
RNF4-214ENST00000511600 KRTAP2-3P0C7H8 128 aa2.34□□□□□ -2.03
RNF4-214ENST00000511600 KRTAP2-4Q9BYR9 128 aa2.34□□□□□ -2.03
RNF4-214ENST00000511600 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
RNF4-214ENST00000511600 MACF1Q9UPN3 7388 aaKnown RBP2.33□□□□□ -2.04
RNF4-214ENST00000511600 SPRR2DP22532 72 aa2.29□□□□□ -2.04
RNF4-214ENST00000511600 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
RNF4-214ENST00000511600 NEBP20929 6669 aa2.27□□□□□ -2.05
RNF4-214ENST00000511600 LCE1AQ5T7P2 110 aa2.27□□□□□ -2.05
RNF4-214ENST00000511600 KRTAP4-9Q9BYQ8 210 aa2.26□□□□□ -2.05
RNF4-214ENST00000511600 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
RNF4-214ENST00000511600 KRTAP4-7Q9BYR0 210 aa2.24□□□□□ -2.05
RNF4-214ENST00000511600 KMT2DO14686 5537 aa2.23□□□□□ -2.05
RNF4-214ENST00000511600 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
RNF4-214ENST00000511600 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
RNF4-214ENST00000511600 PRM1P04553 51 aa2.2□□□□□ -2.06
RNF4-214ENST00000511600 LCE3EQ5T5B0 92 aa2.2□□□□□ -2.06
RNF4-214ENST00000511600 KRTAP5-9P26371 169 aa2.19□□□□□ -2.06
RNF4-214ENST00000511600 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
RNF4-214ENST00000511600 KRTAP4-2Q9BYR5 136 aa2.17□□□□□ -2.06
RNF4-214ENST00000511600 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
RNF4-214ENST00000511600 KRTAP9-6A8MVA2 160 aa2.16□□□□□ -2.06
RNF4-214ENST00000511600 MT1EP04732 61 aa2.15□□□□□ -2.07
RNF4-214ENST00000511600 MT3P25713 68 aa2.15□□□□□ -2.07
RNF4-214ENST00000511600 MT1LQ93083 61 aa2.14□□□□□ -2.07
RNF4-214ENST00000511600 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
RNF4-214ENST00000511600 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
RNF4-214ENST00000511600 MT1GP13640 62 aa2.1□□□□□ -2.07
RNF4-214ENST00000511600 MUC12Q9UKN1 5478 aa2.08□□□□□ -2.08
RNF4-214ENST00000511600 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
RNF4-214ENST00000511600 KRTAP19-3Q7Z4W3 81 aa2.06□□□□□ -2.08
RNF4-214ENST00000511600 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
RNF4-214ENST00000511600 MT1MQ8N339 61 aa2.02□□□□□ -2.09
RNF4-214ENST00000511600 MT4P47944 62 aa2□□□□□ -2.09
RNF4-214ENST00000511600 KRTAP4-3Q9BYR4 195 aa2□□□□□ -2.09
RNF4-214ENST00000511600 MT1AP04731 61 aa1.98□□□□□ -2.09
RNF4-214ENST00000511600 KRTAP6-2Q3LI66 62 aa1.92□□□□□ -2.1
RNF4-214ENST00000511600 KRTAP5-3Q6L8H2 238 aa1.85□□□□□ -2.11
RNF4-214ENST00000511600 KRTAP5-5Q701N2 237 aaPredicted RBP1.78□□□□□ -2.12
RNF4-214ENST00000511600 KRTAP6-1Q3LI64 71 aa1.77□□□□□ -2.13
RNF4-214ENST00000511600 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
RNF4-214ENST00000511600 AHNAK2Q8IVF2 5795 aa1.72□□□□□ -2.13
RNF4-214ENST00000511600 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
RNF4-214ENST00000511600 KRTAP5-4Q6L8H1 288 aa1.71□□□□□ -2.14
RNF4-214ENST00000511600 KRTAP20-2Q3LI61 65 aa1.71□□□□□ -2.14
RNF4-214ENST00000511600 KRTAP5-7Q6L8G8 165 aa1.7□□□□□ -2.14
RNF4-214ENST00000511600 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
RNF4-214ENST00000511600 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
RNF4-214ENST00000511600 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
RNF4-214ENST00000511600 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
RNF4-214ENST00000511600 KRTAP5-2Q701N4 177 aa1.51□□□□□ -2.17
RNF4-214ENST00000511600 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
RNF4-214ENST00000511600 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.42□□□□□ -2.18
RNF4-214ENST00000511600 MUC5ACP98088 5654 aa1.41□□□□□ -2.18
RNF4-214ENST00000511600 KRTAP4-4Q9BYR3 166 aa1.34□□□□□ -2.2
RNF4-214ENST00000511600 LCE1CQ5T751 118 aa1.32□□□□□ -2.2
RNF4-214ENST00000511600 KRTAP5-1Q6L8H4 278 aa1.32□□□□□ -2.2
RNF4-214ENST00000511600 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
RNF4-214ENST00000511600 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
RNF4-214ENST00000511600 KRTAP21-2Q3LI59 83 aa1.15□□□□□ -2.23
RNF4-214ENST00000511600 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 130.1 ms