RNA–Protein interactions for RNA: ENST00000511270.1

PROM1-212, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-212ENST00000511270 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
PROM1-212ENST00000511270 SPRR2GQ9BYE4 73 aa2.46□□□□□ -2.02
PROM1-212ENST00000511270 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PROM1-212ENST00000511270 KRTAP10-10P60014 251 aa2.45□□□□□ -2.02
PROM1-212ENST00000511270 ROMO1P60602 79 aa2.44□□□□□ -2.02
PROM1-212ENST00000511270 KRTAP19-8Q3LI54 63 aa2.41□□□□□ -2.02
PROM1-212ENST00000511270 C10orf95Q9H7T3 257 aa2.41□□□□□ -2.02
PROM1-212ENST00000511270 MT1BP07438 61 aa2.39□□□□□ -2.03
PROM1-212ENST00000511270 KRTAP25-1Q3LHN0 102 aa2.37□□□□□ -2.03
PROM1-212ENST00000511270 PLAC4Q8WY50 150 aa2.36□□□□□ -2.03
PROM1-212ENST00000511270 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
PROM1-212ENST00000511270 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
PROM1-212ENST00000511270 KRTAP5-5Q701N2 237 aaPredicted RBP2.32□□□□□ -2.04
PROM1-212ENST00000511270 MT1XP80297 61 aa2.31□□□□□ -2.04
PROM1-212ENST00000511270 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
PROM1-212ENST00000511270 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
PROM1-212ENST00000511270 USH2AO75445 5202 aa2.28□□□□□ -2.04
PROM1-212ENST00000511270 TNP1P09430 55 aa2.27□□□□□ -2.05
PROM1-212ENST00000511270 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
PROM1-212ENST00000511270 SSPOA2VEC9 5147 aa2.22□□□□□ -2.05
PROM1-212ENST00000511270 PP632Q6XCG6 107 aa2.21□□□□□ -2.06
PROM1-212ENST00000511270 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
PROM1-212ENST00000511270 KRTAP19-6Q3LI70 58 aa2.18□□□□□ -2.06
PROM1-212ENST00000511270 LCE1CQ5T751 118 aa2.17□□□□□ -2.06
PROM1-212ENST00000511270 LCE1BQ5T7P3 118 aa2.17□□□□□ -2.06
PROM1-212ENST00000511270 KRTAP8-1Q8IUC2 63 aa2.16□□□□□ -2.06
PROM1-212ENST00000511270 KMT2DO14686 5537 aa2.11□□□□□ -2.07
PROM1-212ENST00000511270 KRTAP12-3P60328 96 aa2.09□□□□□ -2.07
PROM1-212ENST00000511270 KRTAP19-5Q3LI72 72 aa2.09□□□□□ -2.07
PROM1-212ENST00000511270 KRTAP19-7Q3SYF9 63 aa2.06□□□□□ -2.08
PROM1-212ENST00000511270 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
PROM1-212ENST00000511270 FSIP2Q5CZC0 6907 aa2.06□□□□□ -2.08
PROM1-212ENST00000511270 MT1EP04732 61 aa2.01□□□□□ -2.09
PROM1-212ENST00000511270 CRCT1Q9UGL9 99 aa2□□□□□ -2.09
PROM1-212ENST00000511270 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
PROM1-212ENST00000511270 MT1LQ93083 61 aa1.98□□□□□ -2.09
PROM1-212ENST00000511270 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
PROM1-212ENST00000511270 MUC12Q9UKN1 5478 aa1.92□□□□□ -2.1
PROM1-212ENST00000511270 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
PROM1-212ENST00000511270 KRTAP19-3Q7Z4W3 81 aa1.91□□□□□ -2.1
PROM1-212ENST00000511270 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
PROM1-212ENST00000511270 MT1GP13640 62 aa1.9□□□□□ -2.11
PROM1-212ENST00000511270 MT1MQ8N339 61 aa1.89□□□□□ -2.11
PROM1-212ENST00000511270 SYNE2Q8WXH0 6885 aaKnown RBP1.85□□□□□ -2.11
PROM1-212ENST00000511270 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
PROM1-212ENST00000511270 SPRR2EP22531 72 aa1.8□□□□□ -2.12
PROM1-212ENST00000511270 SPRR2BP35325 72 aa1.8□□□□□ -2.12
PROM1-212ENST00000511270 SPRR2AP35326 72 aa1.8□□□□□ -2.12
PROM1-212ENST00000511270 MDN1Q9NU22 5596 aa1.78□□□□□ -2.12
PROM1-212ENST00000511270 KRTAP2-3P0C7H8 128 aa1.77□□□□□ -2.13
PROM1-212ENST00000511270 KRTAP2-4Q9BYR9 128 aa1.77□□□□□ -2.13
PROM1-212ENST00000511270 KRTAP2-1Q9BYU5 128 aa1.77□□□□□ -2.13
PROM1-212ENST00000511270 DSTQ03001 7570 aaKnown RBP1.73□□□□□ -2.13
PROM1-212ENST00000511270 SPRR2DP22532 72 aa1.73□□□□□ -2.13
PROM1-212ENST00000511270 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
PROM1-212ENST00000511270 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
PROM1-212ENST00000511270 MT1AP04731 61 aa1.68□□□□□ -2.14
PROM1-212ENST00000511270 KRTAP6-1Q3LI64 71 aa1.68□□□□□ -2.14
PROM1-212ENST00000511270 NEBP20929 6669 aa1.66□□□□□ -2.14
PROM1-212ENST00000511270 SYNE1Q8NF91 8797 aaKnown RBP1.64□□□□□ -2.15
PROM1-212ENST00000511270 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
PROM1-212ENST00000511270 INE1O15225 51 aa1.59□□□□□ -2.15
PROM1-212ENST00000511270 KRTAP20-1Q3LI63 56 aa1.53□□□□□ -2.16
PROM1-212ENST00000511270 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
PROM1-212ENST00000511270 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
PROM1-212ENST00000511270 MT4P47944 62 aa1.51□□□□□ -2.17
PROM1-212ENST00000511270 KRTAP20-2Q3LI61 65 aa1.5□□□□□ -2.17
PROM1-212ENST00000511270 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
PROM1-212ENST00000511270 PRM1P04553 51 aa1.3□□□□□ -2.2
PROM1-212ENST00000511270 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
PROM1-212ENST00000511270 KRTAP5-10Q6L8G5 202 aa1.25□□□□□ -2.21
PROM1-212ENST00000511270 MUC5ACP98088 5654 aa1.24□□□□□ -2.21
PROM1-212ENST00000511270 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
PROM1-212ENST00000511270 GPR98Q8WXG9 6306 aa1.04□□□□□ -2.24
PROM1-212ENST00000511270 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
PROM1-212ENST00000511270 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
PROM1-212ENST00000511270 KRTAP21-1Q3LI58 79 aa0.81□□□□□ -2.28
PROM1-212ENST00000511270 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 63.3 ms