RNA–Protein interactions for RNA: ENST00000510576.6

CLMAT3-201, colorectal liver metastasis associated transcript 3, humanhuman

TSL 1 (best) BASIC

Gene CLMAT3, Length 1,973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMAT3-201ENST00000510576 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.81□□□□□ -1.48
CLMAT3-201ENST00000510576 SYNE2Q8WXH0 6885 aaKnown RBP5.8□□□□□ -1.48
CLMAT3-201ENST00000510576 KRTAP4-7Q9BYR0 210 aa5.75□□□□□ -1.49
CLMAT3-201ENST00000510576 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
CLMAT3-201ENST00000510576 INE1O15225 51 aa5.6□□□□□ -1.51
CLMAT3-201ENST00000510576 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
CLMAT3-201ENST00000510576 MUC12Q9UKN1 5478 aa5.54□□□□□ -1.52
CLMAT3-201ENST00000510576 KRTAP6-3Q3LI67 103 aa5.52□□□□□ -1.53
CLMAT3-201ENST00000510576 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
CLMAT3-201ENST00000510576 MDN1Q9NU22 5596 aa5.51□□□□□ -1.53
CLMAT3-201ENST00000510576 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
CLMAT3-201ENST00000510576 MT1GP13640 62 aa5.49□□□□□ -1.53
CLMAT3-201ENST00000510576 KRTAP5-9P26371 169 aa5.49□□□□□ -1.53
CLMAT3-201ENST00000510576 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
CLMAT3-201ENST00000510576 KRTAP2-1Q9BYU5 128 aa5.49□□□□□ -1.53
CLMAT3-201ENST00000510576 MT1MQ8N339 61 aa5.48□□□□□ -1.53
CLMAT3-201ENST00000510576 KRTAP4-3Q9BYR4 195 aa5.46□□□□□ -1.54
CLMAT3-201ENST00000510576 SPRR2FQ96RM1 72 aa5.45□□□□□ -1.54
CLMAT3-201ENST00000510576 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CLMAT3-201ENST00000510576 LCE5AQ5TCM9 118 aa5.35□□□□□ -1.55
CLMAT3-201ENST00000510576 NEBP20929 6669 aa5.3□□□□□ -1.56
CLMAT3-201ENST00000510576 LCE1AQ5T7P2 110 aa5.27□□□□□ -1.57
CLMAT3-201ENST00000510576 SPRR2EP22531 72 aa5.24□□□□□ -1.57
CLMAT3-201ENST00000510576 SPRR2BP35325 72 aa5.24□□□□□ -1.57
CLMAT3-201ENST00000510576 SPRR2AP35326 72 aa5.24□□□□□ -1.57
CLMAT3-201ENST00000510576 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
CLMAT3-201ENST00000510576 SPRR2DP22532 72 aa5.05□□□□□ -1.6
CLMAT3-201ENST00000510576 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
CLMAT3-201ENST00000510576 MT1AP04731 61 aa4.92□□□□□ -1.62
CLMAT3-201ENST00000510576 KRTAP6-1Q3LI64 71 aa4.91□□□□□ -1.62
CLMAT3-201ENST00000510576 KRTAP20-1Q3LI63 56 aa4.89□□□□□ -1.63
CLMAT3-201ENST00000510576 KRTAP5-5Q701N2 237 aaPredicted RBP4.87□□□□□ -1.63
CLMAT3-201ENST00000510576 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
CLMAT3-201ENST00000510576 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
CLMAT3-201ENST00000510576 KRTAP4-9Q9BYQ8 210 aa4.74□□□□□ -1.65
CLMAT3-201ENST00000510576 KRTAP4-6Q9BYQ5 205 aa4.69□□□□□ -1.66
CLMAT3-201ENST00000510576 SYNE1Q8NF91 8797 aaKnown RBP4.64□□□□□ -1.67
CLMAT3-201ENST00000510576 KRTAP9-4Q9BYQ2 154 aa4.63□□□□□ -1.67
CLMAT3-201ENST00000510576 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
CLMAT3-201ENST00000510576 LCE3EQ5T5B0 92 aa4.53□□□□□ -1.68
CLMAT3-201ENST00000510576 KRTAP5-4Q6L8H1 288 aa4.52□□□□□ -1.69
CLMAT3-201ENST00000510576 KRTAP6-2Q3LI66 62 aa4.44□□□□□ -1.7
CLMAT3-201ENST00000510576 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
CLMAT3-201ENST00000510576 MT4P47944 62 aa4.44□□□□□ -1.7
CLMAT3-201ENST00000510576 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
CLMAT3-201ENST00000510576 MT3P25713 68 aa4.43□□□□□ -1.7
CLMAT3-201ENST00000510576 LCE1DQ5T752 114 aa4.42□□□□□ -1.7
CLMAT3-201ENST00000510576 KRTAP20-2Q3LI61 65 aa4.24□□□□□ -1.73
CLMAT3-201ENST00000510576 PRM1P04553 51 aa4.22□□□□□ -1.73
CLMAT3-201ENST00000510576 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
CLMAT3-201ENST00000510576 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
CLMAT3-201ENST00000510576 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
CLMAT3-201ENST00000510576 KRTAP4-12Q9BQ66 201 aa4.07□□□□□ -1.76
CLMAT3-201ENST00000510576 AHNAK2Q8IVF2 5795 aa4.05□□□□□ -1.76
CLMAT3-201ENST00000510576 KRTAP9-9Q9BYP9 154 aa3.97□□□□□ -1.77
CLMAT3-201ENST00000510576 GPR98Q8WXG9 6306 aa3.94□□□□□ -1.78
CLMAT3-201ENST00000510576 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
CLMAT3-201ENST00000510576 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
CLMAT3-201ENST00000510576 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
CLMAT3-201ENST00000510576 MUC5ACP98088 5654 aa3.66□□□□□ -1.82
CLMAT3-201ENST00000510576 KRTAP5-8O75690 187 aa3.63□□□□□ -1.83
CLMAT3-201ENST00000510576 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
CLMAT3-201ENST00000510576 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
CLMAT3-201ENST00000510576 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
CLMAT3-201ENST00000510576 KRTAP5-1Q6L8H4 278 aa3.57□□□□□ -1.84
CLMAT3-201ENST00000510576 LCE1CQ5T751 118 aa3.46□□□□□ -1.86
CLMAT3-201ENST00000510576 MUC5BQ9HC84 5762 aaPredicted RBP3.31□□□□□ -1.88
CLMAT3-201ENST00000510576 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
CLMAT3-201ENST00000510576 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
CLMAT3-201ENST00000510576 AHNAKQ09666 5890 aaKnown RBP3.17□□□□□ -1.9
CLMAT3-201ENST00000510576 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
CLMAT3-201ENST00000510576 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
CLMAT3-201ENST00000510576 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
CLMAT3-201ENST00000510576 KRTAP21-1Q3LI58 79 aa2.63□□□□□ -1.99
CLMAT3-201ENST00000510576 PHGR1C9JFL3 82 aa2.59□□□□□ -2
CLMAT3-201ENST00000510576 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
CLMAT3-201ENST00000510576 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 252.1 ms