RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 LCE4AQ5TA78 99 aa7.97□□□□□ -1.13
SNF8-209ENST00000510558 KRTAP4-3Q9BYR4 195 aa7.97□□□□□ -1.13
SNF8-209ENST00000510558 TMEM258P61165 79 aa7.96□□□□□ -1.14
SNF8-209ENST00000510558 UQCR11O14957 56 aa7.94□□□□□ -1.14
SNF8-209ENST00000510558 MT4P47944 62 aa7.9□□□□□ -1.14
SNF8-209ENST00000510558 KRTAP12-3P60328 96 aa7.87□□□□□ -1.15
SNF8-209ENST00000510558 KRTAP5-4Q6L8H1 288 aa7.82□□□□□ -1.16
SNF8-209ENST00000510558 HMCN1Q96RW7 5635 aa7.8□□□□□ -1.16
SNF8-209ENST00000510558 KRTAP4-7Q9BYR0 210 aa7.78□□□□□ -1.16
SNF8-209ENST00000510558 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
SNF8-209ENST00000510558 KRTAP25-1Q3LHN0 102 aa7.69□□□□□ -1.18
SNF8-209ENST00000510558 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
SNF8-209ENST00000510558 K7ERS5 55 aa7.62□□□□□ -1.19
SNF8-209ENST00000510558 AHNAK2Q8IVF2 5795 aa7.57□□□□□ -1.2
SNF8-209ENST00000510558 PSPHP1O15172 72 aa7.56□□□□□ -1.2
SNF8-209ENST00000510558 V9GYY9 64 aa7.56□□□□□ -1.2
SNF8-209ENST00000510558 Q1T7F1 81 aa7.49□□□□□ -1.21
SNF8-209ENST00000510558 KRTAP5-5Q701N2 237 aaPredicted RBP7.49□□□□□ -1.21
SNF8-209ENST00000510558 KRTAP5-10Q6L8G5 202 aa7.46□□□□□ -1.22
SNF8-209ENST00000510558 KRTAP23-1A1A580 65 aa7.39□□□□□ -1.23
SNF8-209ENST00000510558 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
SNF8-209ENST00000510558 KRTAP20-2Q3LI61 65 aa7.38□□□□□ -1.23
SNF8-209ENST00000510558 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
SNF8-209ENST00000510558 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
SNF8-209ENST00000510558 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
SNF8-209ENST00000510558 KRTAP12-4P60329 112 aa7.31□□□□□ -1.24
SNF8-209ENST00000510558 A6NED7 52 aa7.3□□□□□ -1.24
SNF8-209ENST00000510558 KRTAP5-3Q6L8H2 238 aa7.28□□□□□ -1.24
SNF8-209ENST00000510558 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
SNF8-209ENST00000510558 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
SNF8-209ENST00000510558 SYNE1Q8NF91 8797 aaKnown RBP7.19□□□□□ -1.26
SNF8-209ENST00000510558 KRTAP5-7Q6L8G8 165 aa7.18□□□□□ -1.26
SNF8-209ENST00000510558 ROMO1P60602 79 aa7.08□□□□□ -1.28
SNF8-209ENST00000510558 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
SNF8-209ENST00000510558 MT1AP04731 61 aa6.95□□□□□ -1.3
SNF8-209ENST00000510558 KRTAP6-1Q3LI64 71 aa6.92□□□□□ -1.3
SNF8-209ENST00000510558 KRTAP5-2Q701N4 177 aa6.84□□□□□ -1.31
SNF8-209ENST00000510558 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
SNF8-209ENST00000510558 PCP4P48539 62 aa6.77□□□□□ -1.33
SNF8-209ENST00000510558 KRTAP4-11Q9BYQ6 195 aa6.75□□□□□ -1.33
SNF8-209ENST00000510558 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
SNF8-209ENST00000510558 KRTAP6-2Q3LI66 62 aa6.62□□□□□ -1.35
SNF8-209ENST00000510558 KRTAP5-8O75690 187 aa6.53□□□□□ -1.36
SNF8-209ENST00000510558 OBSCNQ5VST9 7968 aa6.43□□□□□ -1.38
SNF8-209ENST00000510558 MT3P25713 68 aa6.36□□□□□ -1.39
SNF8-209ENST00000510558 MUC5ACP98088 5654 aa6.21□□□□□ -1.41
SNF8-209ENST00000510558 AHNAKQ09666 5890 aaKnown RBP6.2□□□□□ -1.42
SNF8-209ENST00000510558 KRTAP9-9Q9BYP9 154 aa6.2□□□□□ -1.42
SNF8-209ENST00000510558 MUC5BQ9HC84 5762 aaPredicted RBP6.2□□□□□ -1.42
SNF8-209ENST00000510558 KRTAP5-1Q6L8H4 278 aa6.15□□□□□ -1.42
SNF8-209ENST00000510558 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
SNF8-209ENST00000510558 LCE1EQ5T753 118 aa5.85□□□□□ -1.47
SNF8-209ENST00000510558 PMAIP1Q13794 54 aa5.74□□□□□ -1.49
SNF8-209ENST00000510558 PRAC1Q96KF2 57 aa5.6□□□□□ -1.51
SNF8-209ENST00000510558 KRTAP4-2Q9BYR5 136 aa5.55□□□□□ -1.52
SNF8-209ENST00000510558 LCE1BQ5T7P3 118 aa5.53□□□□□ -1.52
SNF8-209ENST00000510558 LCE1CQ5T751 118 aa5.43□□□□□ -1.54
SNF8-209ENST00000510558 LCE3DQ9BYE3 92 aa5.2□□□□□ -1.58
SNF8-209ENST00000510558 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
SNF8-209ENST00000510558 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
SNF8-209ENST00000510558 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
SNF8-209ENST00000510558 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.94□□□□□ -1.62
SNF8-209ENST00000510558 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
SNF8-209ENST00000510558 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
SNF8-209ENST00000510558 SVIPQ8NHG7 77 aa4.87□□□□□ -1.63
SNF8-209ENST00000510558 LCE1FQ5T754 118 aa4.8□□□□□ -1.64
SNF8-209ENST00000510558 LUZP6Q538Z0 58 aa4.73□□□□□ -1.65
SNF8-209ENST00000510558 KRTAP21-2Q3LI59 83 aa4.55□□□□□ -1.68
SNF8-209ENST00000510558 PHGR1C9JFL3 82 aa4.35□□□□□ -1.71
SNF8-209ENST00000510558 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
SNF8-209ENST00000510558 MUC19Q7Z5P9 8384 aa3.97□□□□□ -1.77
SNF8-209ENST00000510558 PRM1P04553 51 aa3.62□□□□□ -1.83
SNF8-209ENST00000510558 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
SNF8-209ENST00000510558 H3BS24 57 aa3.36□□□□□ -1.87
SNF8-209ENST00000510558 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
SNF8-209ENST00000510558 A0A0A0MQY5 61 aa2.85□□□□□ -1.95
SNF8-209ENST00000510558 INE1O15225 51 aa2.84□□□□□ -1.95
SNF8-209ENST00000510558 MUC16Q8WXI7 14507 aa2.82□□□□□ -1.96
Retrieved 78 of 20,778 RNA–protein pairs in 72.8 ms