RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 MT1GP13640 62 aa6.18□□□□□ -1.42
LIN54-209ENST00000510557 KRTAP19-3Q7Z4W3 81 aa6.16□□□□□ -1.42
LIN54-209ENST00000510557 MT1MQ8N339 61 aa6.14□□□□□ -1.43
LIN54-209ENST00000510557 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
LIN54-209ENST00000510557 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
LIN54-209ENST00000510557 KRTAP4-3Q9BYR4 195 aa6.1□□□□□ -1.43
LIN54-209ENST00000510557 LOC100996750A0A140TA64 210 aa6.09□□□□□ -1.43
LIN54-209ENST00000510557 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
LIN54-209ENST00000510557 LCE5AQ5TCM9 118 aa5.94□□□□□ -1.46
LIN54-209ENST00000510557 CRCT1Q9UGL9 99 aa5.91□□□□□ -1.46
LIN54-209ENST00000510557 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
LIN54-209ENST00000510557 MUC12Q9UKN1 5478 aa5.87□□□□□ -1.47
LIN54-209ENST00000510557 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
LIN54-209ENST00000510557 LCE3BQ5TA77 95 aa5.64□□□□□ -1.51
LIN54-209ENST00000510557 MT1AP04731 61 aa5.64□□□□□ -1.51
LIN54-209ENST00000510557 KRTAP4-9Q9BYQ8 210 aa5.59□□□□□ -1.51
LIN54-209ENST00000510557 MACF1Q9UPN3 7388 aaKnown RBP5.58□□□□□ -1.52
LIN54-209ENST00000510557 DSTQ03001 7570 aaKnown RBP5.57□□□□□ -1.52
LIN54-209ENST00000510557 KRTAP6-1Q3LI64 71 aa5.54□□□□□ -1.52
LIN54-209ENST00000510557 PRM1P04553 51 aa5.51□□□□□ -1.53
LIN54-209ENST00000510557 LCE3DQ9BYE3 92 aa5.49□□□□□ -1.53
LIN54-209ENST00000510557 LCE3EQ5T5B0 92 aa5.49□□□□□ -1.53
LIN54-209ENST00000510557 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
LIN54-209ENST00000510557 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
LIN54-209ENST00000510557 LCE1AQ5T7P2 110 aa5.47□□□□□ -1.53
LIN54-209ENST00000510557 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
LIN54-209ENST00000510557 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
LIN54-209ENST00000510557 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
LIN54-209ENST00000510557 SYNE2Q8WXH0 6885 aaKnown RBP5.35□□□□□ -1.55
LIN54-209ENST00000510557 SPRR2EP22531 72 aa5.34□□□□□ -1.56
LIN54-209ENST00000510557 SPRR2BP35325 72 aa5.34□□□□□ -1.56
LIN54-209ENST00000510557 SPRR2AP35326 72 aa5.34□□□□□ -1.56
LIN54-209ENST00000510557 MDN1Q9NU22 5596 aa5.28□□□□□ -1.56
LIN54-209ENST00000510557 KRTAP9-4Q9BYQ2 154 aa5.23□□□□□ -1.57
LIN54-209ENST00000510557 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
LIN54-209ENST00000510557 KRTAP6-2Q3LI66 62 aa5.16□□□□□ -1.58
LIN54-209ENST00000510557 SPRR2DP22532 72 aa5.12□□□□□ -1.59
LIN54-209ENST00000510557 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.11□□□□□ -1.59
LIN54-209ENST00000510557 MT3P25713 68 aa5.03□□□□□ -1.6
LIN54-209ENST00000510557 KRTAP2-2Q9BYT5 123 aa4.96□□□□□ -1.62
LIN54-209ENST00000510557 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
LIN54-209ENST00000510557 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
LIN54-209ENST00000510557 NEBP20929 6669 aa4.75□□□□□ -1.65
LIN54-209ENST00000510557 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
LIN54-209ENST00000510557 LCE4AQ5TA78 99 aa4.51□□□□□ -1.69
LIN54-209ENST00000510557 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
LIN54-209ENST00000510557 KRTAP5-2Q701N4 177 aa4.47□□□□□ -1.69
LIN54-209ENST00000510557 MT4P47944 62 aa4.45□□□□□ -1.7
LIN54-209ENST00000510557 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
LIN54-209ENST00000510557 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
LIN54-209ENST00000510557 KRTAP20-1Q3LI63 56 aa4.3□□□□□ -1.72
LIN54-209ENST00000510557 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
LIN54-209ENST00000510557 HMCN1Q96RW7 5635 aa4.15□□□□□ -1.74
LIN54-209ENST00000510557 KRTAP4-12Q9BQ66 201 aa4.14□□□□□ -1.75
LIN54-209ENST00000510557 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
LIN54-209ENST00000510557 MUC5ACP98088 5654 aa4.08□□□□□ -1.76
LIN54-209ENST00000510557 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
LIN54-209ENST00000510557 KRTAP5-10Q6L8G5 202 aa3.94□□□□□ -1.78
LIN54-209ENST00000510557 KRTAP9-9Q9BYP9 154 aa3.93□□□□□ -1.78
LIN54-209ENST00000510557 KRTAP5-1Q6L8H4 278 aa3.91□□□□□ -1.78
LIN54-209ENST00000510557 LCE1CQ5T751 118 aa3.87□□□□□ -1.79
LIN54-209ENST00000510557 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
LIN54-209ENST00000510557 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
LIN54-209ENST00000510557 AHNAK2Q8IVF2 5795 aa3.63□□□□□ -1.83
LIN54-209ENST00000510557 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
LIN54-209ENST00000510557 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
LIN54-209ENST00000510557 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
LIN54-209ENST00000510557 KRTAP5-8O75690 187 aa3.52□□□□□ -1.85
LIN54-209ENST00000510557 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
LIN54-209ENST00000510557 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
LIN54-209ENST00000510557 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
LIN54-209ENST00000510557 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
LIN54-209ENST00000510557 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
LIN54-209ENST00000510557 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
LIN54-209ENST00000510557 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
LIN54-209ENST00000510557 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
LIN54-209ENST00000510557 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 63.7 ms