RNA–Protein interactions for RNA: ENST00000509564.1

SDHA-211, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-211ENST00000509564 MT1LQ93083 61 aa4.29□□□□□ -1.72
SDHA-211ENST00000509564 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
SDHA-211ENST00000509564 MIR22HGQ0VDD5 57 aa4.24□□□□□ -1.73
SDHA-211ENST00000509564 V9GYY9 64 aa4.22□□□□□ -1.73
SDHA-211ENST00000509564 K7ERS5 55 aa4.2□□□□□ -1.74
SDHA-211ENST00000509564 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
SDHA-211ENST00000509564 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
SDHA-211ENST00000509564 PSPHP1O15172 72 aa4.17□□□□□ -1.74
SDHA-211ENST00000509564 Q1T7F1 81 aa4.16□□□□□ -1.74
SDHA-211ENST00000509564 MT4P47944 62 aa4.15□□□□□ -1.75
SDHA-211ENST00000509564 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
SDHA-211ENST00000509564 KRTAP4-3Q9BYR4 195 aa4.15□□□□□ -1.75
SDHA-211ENST00000509564 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
SDHA-211ENST00000509564 GPR98Q8WXG9 6306 aa4.1□□□□□ -1.75
SDHA-211ENST00000509564 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
SDHA-211ENST00000509564 A6NED7 52 aa4.04□□□□□ -1.76
SDHA-211ENST00000509564 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
SDHA-211ENST00000509564 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
SDHA-211ENST00000509564 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
SDHA-211ENST00000509564 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
SDHA-211ENST00000509564 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
SDHA-211ENST00000509564 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
SDHA-211ENST00000509564 PCP4P48539 62 aa3.92□□□□□ -1.78
SDHA-211ENST00000509564 KRTAP5-5Q701N2 237 aaPredicted RBP3.91□□□□□ -1.78
SDHA-211ENST00000509564 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
SDHA-211ENST00000509564 ROMO1P60602 79 aa3.88□□□□□ -1.79
SDHA-211ENST00000509564 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
SDHA-211ENST00000509564 AHNAK2Q8IVF2 5795 aa3.87□□□□□ -1.79
SDHA-211ENST00000509564 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
SDHA-211ENST00000509564 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
SDHA-211ENST00000509564 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
SDHA-211ENST00000509564 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
SDHA-211ENST00000509564 KRTAP5-3Q6L8H2 238 aa3.79□□□□□ -1.8
SDHA-211ENST00000509564 KRTAP5-7Q6L8G8 165 aa3.74□□□□□ -1.81
SDHA-211ENST00000509564 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
SDHA-211ENST00000509564 MT1AP04731 61 aa3.67□□□□□ -1.82
SDHA-211ENST00000509564 SVIPQ8NHG7 77 aa3.65□□□□□ -1.83
SDHA-211ENST00000509564 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
SDHA-211ENST00000509564 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
SDHA-211ENST00000509564 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
SDHA-211ENST00000509564 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
SDHA-211ENST00000509564 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
SDHA-211ENST00000509564 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
SDHA-211ENST00000509564 BRK1Q8WUW1 75 aa3.49□□□□□ -1.85
SDHA-211ENST00000509564 KRTAP4-2Q9BYR5 136 aa3.49□□□□□ -1.85
SDHA-211ENST00000509564 KRTAP4-12Q9BQ66 201 aa3.48□□□□□ -1.85
SDHA-211ENST00000509564 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SDHA-211ENST00000509564 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
SDHA-211ENST00000509564 MT3P25713 68 aa3.33□□□□□ -1.88
SDHA-211ENST00000509564 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
SDHA-211ENST00000509564 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SDHA-211ENST00000509564 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
SDHA-211ENST00000509564 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
SDHA-211ENST00000509564 H3BS24 57 aa3.17□□□□□ -1.9
SDHA-211ENST00000509564 PRO0628Q9UI54 55 aa3.15□□□□□ -1.91
SDHA-211ENST00000509564 MUC5BQ9HC84 5762 aaPredicted RBP3.14□□□□□ -1.91
SDHA-211ENST00000509564 PRAC1Q96KF2 57 aa3.13□□□□□ -1.91
SDHA-211ENST00000509564 AHNAKQ09666 5890 aaKnown RBP3.12□□□□□ -1.91
SDHA-211ENST00000509564 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
SDHA-211ENST00000509564 KTN1-AS1Q86SY8 53 aa2.91□□□□□ -1.94
SDHA-211ENST00000509564 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SDHA-211ENST00000509564 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
SDHA-211ENST00000509564 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
SDHA-211ENST00000509564 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SDHA-211ENST00000509564 A0A0A0MQY5 61 aa2.68□□□□□ -1.98
SDHA-211ENST00000509564 LCE3EQ5T5B0 92 aa2.62□□□□□ -1.99
SDHA-211ENST00000509564 KRTAP5-11Q6L8G4 156 aa2.61□□□□□ -1.99
SDHA-211ENST00000509564 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
SDHA-211ENST00000509564 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
SDHA-211ENST00000509564 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
SDHA-211ENST00000509564 NDUFAF8A1L188 74 aa2.29□□□□□ -2.04
SDHA-211ENST00000509564 PHGR1C9JFL3 82 aa2.29□□□□□ -2.04
SDHA-211ENST00000509564 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
SDHA-211ENST00000509564 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
SDHA-211ENST00000509564 PRM1P04553 51 aa1.97□□□□□ -2.09
SDHA-211ENST00000509564 INE1O15225 51 aa1.91□□□□□ -2.1
SDHA-211ENST00000509564 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
SDHA-211ENST00000509564 MUC16Q8WXI7 14507 aa1.43□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 226.2 ms