RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 KRTAP4-3Q9BYR4 195 aa4.35□□□□□ -1.71
KDM3B-206ENST00000509468 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
KDM3B-206ENST00000509468 HMCN1Q96RW7 5635 aa4.31□□□□□ -1.72
KDM3B-206ENST00000509468 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
KDM3B-206ENST00000509468 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
KDM3B-206ENST00000509468 KRTAP4-6Q9BYQ5 205 aa4.28□□□□□ -1.72
KDM3B-206ENST00000509468 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
KDM3B-206ENST00000509468 CCDC179H3BU77 68 aa4.23□□□□□ -1.73
KDM3B-206ENST00000509468 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
KDM3B-206ENST00000509468 KRTAP4-7Q9BYR0 210 aa4.22□□□□□ -1.73
KDM3B-206ENST00000509468 UQCR11O14957 56 aa4.21□□□□□ -1.74
KDM3B-206ENST00000509468 AHNAK2Q8IVF2 5795 aa4.18□□□□□ -1.74
KDM3B-206ENST00000509468 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
KDM3B-206ENST00000509468 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
KDM3B-206ENST00000509468 KRTAP19-4Q3LI73 84 aa4.12□□□□□ -1.75
KDM3B-206ENST00000509468 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
KDM3B-206ENST00000509468 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
KDM3B-206ENST00000509468 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
KDM3B-206ENST00000509468 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
KDM3B-206ENST00000509468 TMEM258P61165 79 aa4.1□□□□□ -1.75
KDM3B-206ENST00000509468 K7ERS5 55 aa4.09□□□□□ -1.75
KDM3B-206ENST00000509468 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
KDM3B-206ENST00000509468 KRTAP5-7Q6L8G8 165 aa4.09□□□□□ -1.75
KDM3B-206ENST00000509468 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
KDM3B-206ENST00000509468 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
KDM3B-206ENST00000509468 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
KDM3B-206ENST00000509468 V9GYY9 64 aa3.97□□□□□ -1.77
KDM3B-206ENST00000509468 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
KDM3B-206ENST00000509468 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
KDM3B-206ENST00000509468 PSPHP1O15172 72 aa3.91□□□□□ -1.78
KDM3B-206ENST00000509468 H3BS24 57 aa3.89□□□□□ -1.79
KDM3B-206ENST00000509468 Q1T7F1 81 aa3.89□□□□□ -1.79
KDM3B-206ENST00000509468 MT1AP04731 61 aa3.81□□□□□ -1.8
KDM3B-206ENST00000509468 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
KDM3B-206ENST00000509468 A6NED7 52 aa3.8□□□□□ -1.8
KDM3B-206ENST00000509468 KRTAP4-11Q9BYQ6 195 aa3.8□□□□□ -1.8
KDM3B-206ENST00000509468 RPS28P62857 69 aaKnown RBP3.78□□□□□ -1.8
KDM3B-206ENST00000509468 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
KDM3B-206ENST00000509468 KRTAP5-2Q701N4 177 aa3.78□□□□□ -1.8
KDM3B-206ENST00000509468 ROMO1P60602 79 aa3.74□□□□□ -1.81
KDM3B-206ENST00000509468 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
KDM3B-206ENST00000509468 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
KDM3B-206ENST00000509468 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
KDM3B-206ENST00000509468 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
KDM3B-206ENST00000509468 PCP4P48539 62 aa3.6□□□□□ -1.83
KDM3B-206ENST00000509468 KRTAP9-9Q9BYP9 154 aa3.54□□□□□ -1.84
KDM3B-206ENST00000509468 MT3P25713 68 aa3.53□□□□□ -1.84
KDM3B-206ENST00000509468 OBSCNQ5VST9 7968 aa3.51□□□□□ -1.85
KDM3B-206ENST00000509468 MUC5ACP98088 5654 aa3.49□□□□□ -1.85
KDM3B-206ENST00000509468 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
KDM3B-206ENST00000509468 KRTAP5-1Q6L8H4 278 aa3.42□□□□□ -1.86
KDM3B-206ENST00000509468 MUC5BQ9HC84 5762 aaPredicted RBP3.42□□□□□ -1.86
KDM3B-206ENST00000509468 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
KDM3B-206ENST00000509468 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
KDM3B-206ENST00000509468 BRK1Q8WUW1 75 aa3.07□□□□□ -1.92
KDM3B-206ENST00000509468 LCE1BQ5T7P3 118 aa3.06□□□□□ -1.92
KDM3B-206ENST00000509468 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
KDM3B-206ENST00000509468 LCE1CQ5T751 118 aa3.03□□□□□ -1.92
KDM3B-206ENST00000509468 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
KDM3B-206ENST00000509468 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
KDM3B-206ENST00000509468 PRAC1Q96KF2 57 aa2.82□□□□□ -1.96
KDM3B-206ENST00000509468 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
KDM3B-206ENST00000509468 LCE1FQ5T754 118 aa2.74□□□□□ -1.97
KDM3B-206ENST00000509468 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
KDM3B-206ENST00000509468 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
KDM3B-206ENST00000509468 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
KDM3B-206ENST00000509468 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
KDM3B-206ENST00000509468 PRO0628Q9UI54 55 aa2.5□□□□□ -2.01
KDM3B-206ENST00000509468 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
KDM3B-206ENST00000509468 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
KDM3B-206ENST00000509468 LUZP6Q538Z0 58 aa2.47□□□□□ -2.01
KDM3B-206ENST00000509468 KTN1-AS1Q86SY8 53 aa2.44□□□□□ -2.02
KDM3B-206ENST00000509468 KRTAP4-4Q9BYR3 166 aa2.29□□□□□ -2.04
KDM3B-206ENST00000509468 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
KDM3B-206ENST00000509468 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
KDM3B-206ENST00000509468 PRM1P04553 51 aa1.88□□□□□ -2.11
KDM3B-206ENST00000509468 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
KDM3B-206ENST00000509468 INE1O15225 51 aa1.55□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 5.7 ms