RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
HMGCR-208ENST00000509431 TNP1P09430 55 aa3.99□□□□□ -1.77
HMGCR-208ENST00000509431 HIST1H4AP62805 103 aaKnown RBP3.99□□□□□ -1.77
HMGCR-208ENST00000509431 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
HMGCR-208ENST00000509431 H3BPC8 53 aa3.98□□□□□ -1.77
HMGCR-208ENST00000509431 K7ERU9 68 aa3.94□□□□□ -1.78
HMGCR-208ENST00000509431 ATP5EP2Q5VTU8 51 aa3.93□□□□□ -1.78
HMGCR-208ENST00000509431 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
HMGCR-208ENST00000509431 GTF2H5Q6ZYL4 71 aa3.92□□□□□ -1.78
HMGCR-208ENST00000509431 OCR1Q9BZK8 76 aa3.92□□□□□ -1.78
HMGCR-208ENST00000509431 PRO0461Q9UI25 63 aa3.91□□□□□ -1.78
HMGCR-208ENST00000509431 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
HMGCR-208ENST00000509431 SCGB1A1P11684 91 aa3.88□□□□□ -1.79
HMGCR-208ENST00000509431 J3QR89 54 aa3.86□□□□□ -1.79
HMGCR-208ENST00000509431 F8W1H4 67 aa3.81□□□□□ -1.8
HMGCR-208ENST00000509431 SPATA8Q6RVD6 105 aa3.79□□□□□ -1.8
HMGCR-208ENST00000509431 SVIPQ8NHG7 77 aa3.79□□□□□ -1.8
HMGCR-208ENST00000509431 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
HMGCR-208ENST00000509431 MT3P25713 68 aa3.72□□□□□ -1.81
HMGCR-208ENST00000509431 ETDBQ3ZM63 59 aa3.71□□□□□ -1.82
HMGCR-208ENST00000509431 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
HMGCR-208ENST00000509431 SEC61GP60059 68 aa3.67□□□□□ -1.82
HMGCR-208ENST00000509431 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
HMGCR-208ENST00000509431 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
HMGCR-208ENST00000509431 KRTAP15-1Q3LI76 137 aa3.66□□□□□ -1.82
HMGCR-208ENST00000509431 ANAPC13Q9BS18 74 aa3.66□□□□□ -1.82
HMGCR-208ENST00000509431 A0A1B0GU33 70 aa3.64□□□□□ -1.83
HMGCR-208ENST00000509431 LCE3CQ5T5A8 94 aa3.64□□□□□ -1.83
HMGCR-208ENST00000509431 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
HMGCR-208ENST00000509431 LINC00643Q86TS7 51 aa3.59□□□□□ -1.83
HMGCR-208ENST00000509431 SMIM26A0A096LP01 95 aa3.58□□□□□ -1.84
HMGCR-208ENST00000509431 CCDC179H3BU77 68 aa3.53□□□□□ -1.84
HMGCR-208ENST00000509431 SMIM20Q8N5G0 67 aa3.52□□□□□ -1.85
HMGCR-208ENST00000509431 RPS28P62857 69 aaKnown RBP3.5□□□□□ -1.85
HMGCR-208ENST00000509431 COX7CP15954 63 aa3.48□□□□□ -1.85
HMGCR-208ENST00000509431 A8MU10 97 aa3.46□□□□□ -1.86
HMGCR-208ENST00000509431 TMEM258P61165 79 aa3.46□□□□□ -1.86
HMGCR-208ENST00000509431 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
HMGCR-208ENST00000509431 SERP2Q8N6R1 65 aa3.44□□□□□ -1.86
HMGCR-208ENST00000509431 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
HMGCR-208ENST00000509431 SPANXA2-OT1Q8N9U9 137 aa3.41□□□□□ -1.86
HMGCR-208ENST00000509431 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
HMGCR-208ENST00000509431 ATP5EP56381 51 aaPredicted RBP3.36□□□□□ -1.87
HMGCR-208ENST00000509431 PHGR1C9JFL3 82 aa3.34□□□□□ -1.87
HMGCR-208ENST00000509431 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
HMGCR-208ENST00000509431 COA5Q86WW8 74 aa3.33□□□□□ -1.88
HMGCR-208ENST00000509431 PRO0628Q9UI54 55 aa3.31□□□□□ -1.88
HMGCR-208ENST00000509431 H7BZZ5 65 aa3.29□□□□□ -1.88
HMGCR-208ENST00000509431 KRTAP23-1A1A580 65 aa3.27□□□□□ -1.89
HMGCR-208ENST00000509431 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
HMGCR-208ENST00000509431 SNURFQ9Y675 71 aa3.25□□□□□ -1.89
HMGCR-208ENST00000509431 A0A1B0GU69 56 aa3.2□□□□□ -1.9
HMGCR-208ENST00000509431 BRK1Q8WUW1 75 aa3.18□□□□□ -1.9
HMGCR-208ENST00000509431 V9GYY9 64 aa3.18□□□□□ -1.9
HMGCR-208ENST00000509431 Q1T7F1 81 aa3.17□□□□□ -1.9
HMGCR-208ENST00000509431 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
HMGCR-208ENST00000509431 PMAIP1Q13794 54 aa3.09□□□□□ -1.91
HMGCR-208ENST00000509431 PSPHP1O15172 72 aa3.04□□□□□ -1.92
HMGCR-208ENST00000509431 KTN1-AS1Q86SY8 53 aa3.02□□□□□ -1.93
HMGCR-208ENST00000509431 A6NED7 52 aa2.99□□□□□ -1.93
HMGCR-208ENST00000509431 CDC42SE1Q9NRR8 79 aa2.99□□□□□ -1.93
HMGCR-208ENST00000509431 LINC01558Q9Y6Z2 57 aa2.99□□□□□ -1.93
HMGCR-208ENST00000509431 UQCR11O14957 56 aa2.83□□□□□ -1.96
HMGCR-208ENST00000509431 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
HMGCR-208ENST00000509431 K7ERS5 55 aa2.77□□□□□ -1.97
HMGCR-208ENST00000509431 PRAC1Q96KF2 57 aa2.74□□□□□ -1.97
HMGCR-208ENST00000509431 KRTAP21-2Q3LI59 83 aa2.65□□□□□ -1.99
HMGCR-208ENST00000509431 MUC19Q7Z5P9 8384 aa2.63□□□□□ -1.99
HMGCR-208ENST00000509431 ROMO1P60602 79 aa2.61□□□□□ -1.99
HMGCR-208ENST00000509431 KRTAP21-1Q3LI58 79 aa2.59□□□□□ -1.99
HMGCR-208ENST00000509431 A0A0A0MQY5 61 aa2.55□□□□□ -2
HMGCR-208ENST00000509431 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
HMGCR-208ENST00000509431 NDUFAF8A1L188 74 aa2.38□□□□□ -2.03
HMGCR-208ENST00000509431 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
HMGCR-208ENST00000509431 LCE3EQ5T5B0 92 aa2.18□□□□□ -2.06
HMGCR-208ENST00000509431 INE1O15225 51 aa2.05□□□□□ -2.08
HMGCR-208ENST00000509431 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
HMGCR-208ENST00000509431 PRM1P04553 51 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 7 ms