RNA–Protein interactions for RNA: ENST00000508900.1

FRAS1-203, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best)

Gene FRAS1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-203ENST00000508900 MT1LQ93083 61 aa4.3□□□□□ -1.72
FRAS1-203ENST00000508900 MT1EP04732 61 aa4.26□□□□□ -1.73
FRAS1-203ENST00000508900 CRCT1Q9UGL9 99 aa4.26□□□□□ -1.73
FRAS1-203ENST00000508900 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
FRAS1-203ENST00000508900 LOC100996750A0A140TA64 210 aa4.11□□□□□ -1.75
FRAS1-203ENST00000508900 FCGBPQ9Y6R7 5405 aaPredicted RBP4.08□□□□□ -1.76
FRAS1-203ENST00000508900 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
FRAS1-203ENST00000508900 MT1GP13640 62 aa4.03□□□□□ -1.76
FRAS1-203ENST00000508900 KRTAP12-4P60329 112 aa4.02□□□□□ -1.77
FRAS1-203ENST00000508900 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
FRAS1-203ENST00000508900 MT1MQ8N339 61 aa3.96□□□□□ -1.78
FRAS1-203ENST00000508900 MACF1Q9UPN3 7388 aaKnown RBP3.96□□□□□ -1.78
FRAS1-203ENST00000508900 KRTAP19-6Q3LI70 58 aa3.93□□□□□ -1.78
FRAS1-203ENST00000508900 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
FRAS1-203ENST00000508900 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
FRAS1-203ENST00000508900 KRTAP19-3Q7Z4W3 81 aa3.91□□□□□ -1.78
FRAS1-203ENST00000508900 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
FRAS1-203ENST00000508900 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.79
FRAS1-203ENST00000508900 KRTAP4-9Q9BYQ8 210 aa3.79□□□□□ -1.8
FRAS1-203ENST00000508900 LCE3BQ5TA77 95 aa3.78□□□□□ -1.81
FRAS1-203ENST00000508900 MT1AP04731 61 aa3.76□□□□□ -1.81
FRAS1-203ENST00000508900 LCE5AQ5TCM9 118 aa3.76□□□□□ -1.81
FRAS1-203ENST00000508900 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
FRAS1-203ENST00000508900 KRTAP6-3Q3LI67 103 aa3.69□□□□□ -1.82
FRAS1-203ENST00000508900 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
FRAS1-203ENST00000508900 KRTAP6-1Q3LI64 71 aa3.66□□□□□ -1.82
FRAS1-203ENST00000508900 KRTAP5-5Q701N2 237 aaPredicted RBP3.66□□□□□ -1.82
FRAS1-203ENST00000508900 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
FRAS1-203ENST00000508900 LCE3DQ9BYE3 92 aa3.64□□□□□ -1.83
FRAS1-203ENST00000508900 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
FRAS1-203ENST00000508900 NEBP20929 6669 aa3.61□□□□□ -1.83
FRAS1-203ENST00000508900 SPRR2FQ96RM1 72 aa3.61□□□□□ -1.83
FRAS1-203ENST00000508900 PRM1P04553 51 aa3.59□□□□□ -1.83
FRAS1-203ENST00000508900 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
FRAS1-203ENST00000508900 KRTAP5-9P26371 169 aa3.56□□□□□ -1.84
FRAS1-203ENST00000508900 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
FRAS1-203ENST00000508900 SPRR2EP22531 72 aa3.42□□□□□ -1.86
FRAS1-203ENST00000508900 SPRR2BP35325 72 aa3.42□□□□□ -1.86
FRAS1-203ENST00000508900 SPRR2AP35326 72 aa3.42□□□□□ -1.86
FRAS1-203ENST00000508900 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
FRAS1-203ENST00000508900 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
FRAS1-203ENST00000508900 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
FRAS1-203ENST00000508900 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
FRAS1-203ENST00000508900 SPRR2DP22532 72 aa3.29□□□□□ -1.88
FRAS1-203ENST00000508900 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
FRAS1-203ENST00000508900 MT3P25713 68 aa3.19□□□□□ -1.9
FRAS1-203ENST00000508900 OBSCNQ5VST9 7968 aa3.11□□□□□ -1.91
FRAS1-203ENST00000508900 HMCN1Q96RW7 5635 aa2.96□□□□□ -1.94
FRAS1-203ENST00000508900 MT4P47944 62 aa2.92□□□□□ -1.94
FRAS1-203ENST00000508900 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
FRAS1-203ENST00000508900 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.95
FRAS1-203ENST00000508900 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
FRAS1-203ENST00000508900 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
FRAS1-203ENST00000508900 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
FRAS1-203ENST00000508900 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
FRAS1-203ENST00000508900 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
FRAS1-203ENST00000508900 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
FRAS1-203ENST00000508900 KRTAP20-2Q3LI61 65 aa2.73□□□□□ -1.97
FRAS1-203ENST00000508900 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
FRAS1-203ENST00000508900 KRTAP5-10Q6L8G5 202 aa2.68□□□□□ -1.98
FRAS1-203ENST00000508900 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
FRAS1-203ENST00000508900 KRTAP5-1Q6L8H4 278 aa2.6□□□□□ -1.99
FRAS1-203ENST00000508900 KRTAP5-7Q6L8G8 165 aa2.54□□□□□ -2
FRAS1-203ENST00000508900 LCE1BQ5T7P3 118 aa2.52□□□□□ -2.01
FRAS1-203ENST00000508900 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
FRAS1-203ENST00000508900 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
FRAS1-203ENST00000508900 KRTAP5-8O75690 187 aa2.39□□□□□ -2.03
FRAS1-203ENST00000508900 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
FRAS1-203ENST00000508900 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
FRAS1-203ENST00000508900 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
FRAS1-203ENST00000508900 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
FRAS1-203ENST00000508900 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.05
FRAS1-203ENST00000508900 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
FRAS1-203ENST00000508900 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.07
FRAS1-203ENST00000508900 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
FRAS1-203ENST00000508900 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
FRAS1-203ENST00000508900 PHGR1C9JFL3 82 aa1.78□□□□□ -2.13
FRAS1-203ENST00000508900 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 82.2 ms