RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 A6NN06 94 aa2.42□□□□□ -2.02
HMGB1P44-201ENST00000508597 A0A1B0GU69 56 aa2.41□□□□□ -2.02
HMGB1P44-201ENST00000508597 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
HMGB1P44-201ENST00000508597 A0A1B0GU33 70 aa2.38□□□□□ -2.03
HMGB1P44-201ENST00000508597 MT1BP07438 61 aa2.37□□□□□ -2.03
HMGB1P44-201ENST00000508597 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
HMGB1P44-201ENST00000508597 PLAC4Q8WY50 150 aa2.37□□□□□ -2.03
HMGB1P44-201ENST00000508597 LINC01554Q52M75 96 aa2.35□□□□□ -2.03
HMGB1P44-201ENST00000508597 UQCR11O14957 56 aa2.33□□□□□ -2.04
HMGB1P44-201ENST00000508597 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
HMGB1P44-201ENST00000508597 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
HMGB1P44-201ENST00000508597 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
HMGB1P44-201ENST00000508597 FCGBPQ9Y6R7 5405 aaPredicted RBP2.33□□□□□ -2.04
HMGB1P44-201ENST00000508597 KRTAP5-8O75690 187 aa2.32□□□□□ -2.04
HMGB1P44-201ENST00000508597 MIR22HGQ0VDD5 57 aa2.32□□□□□ -2.04
HMGB1P44-201ENST00000508597 SYNE2Q8WXH0 6885 aaKnown RBP2.31□□□□□ -2.04
HMGB1P44-201ENST00000508597 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
HMGB1P44-201ENST00000508597 MACF1Q9UPN3 7388 aaKnown RBP2.29□□□□□ -2.04
HMGB1P44-201ENST00000508597 A0A0D9SG42 100 aa2.28□□□□□ -2.04
HMGB1P44-201ENST00000508597 MT1XP80297 61 aa2.26□□□□□ -2.05
HMGB1P44-201ENST00000508597 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
HMGB1P44-201ENST00000508597 LCE1BQ5T7P3 118 aa2.26□□□□□ -2.05
HMGB1P44-201ENST00000508597 SPINT4Q6UDR6 99 aa2.26□□□□□ -2.05
HMGB1P44-201ENST00000508597 KRTAP12-1P59990 96 aa2.25□□□□□ -2.05
HMGB1P44-201ENST00000508597 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
HMGB1P44-201ENST00000508597 NEBP20929 6669 aa2.25□□□□□ -2.05
HMGB1P44-201ENST00000508597 K7ERS5 55 aa2.24□□□□□ -2.05
HMGB1P44-201ENST00000508597 KRTAP25-1Q3LHN0 102 aa2.18□□□□□ -2.06
HMGB1P44-201ENST00000508597 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
HMGB1P44-201ENST00000508597 LUZP6Q538Z0 58 aa2.17□□□□□ -2.06
HMGB1P44-201ENST00000508597 TNP1P09430 55 aa2.15□□□□□ -2.07
HMGB1P44-201ENST00000508597 KRTAP20-1Q3LI63 56 aa2.15□□□□□ -2.07
HMGB1P44-201ENST00000508597 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
HMGB1P44-201ENST00000508597 GPR98Q8WXG9 6306 aa2.13□□□□□ -2.07
HMGB1P44-201ENST00000508597 KMT2DO14686 5537 aa2.13□□□□□ -2.07
HMGB1P44-201ENST00000508597 ROMO1P60602 79 aa2.13□□□□□ -2.07
HMGB1P44-201ENST00000508597 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
HMGB1P44-201ENST00000508597 MUC12Q9UKN1 5478 aa2.11□□□□□ -2.07
HMGB1P44-201ENST00000508597 SPRR2FQ96RM1 72 aa2.07□□□□□ -2.08
HMGB1P44-201ENST00000508597 MDN1Q9NU22 5596 aa2.07□□□□□ -2.08
HMGB1P44-201ENST00000508597 KRTAP19-7Q3SYF9 63 aa2.02□□□□□ -2.09
HMGB1P44-201ENST00000508597 MT1EP04732 61 aa2.01□□□□□ -2.09
HMGB1P44-201ENST00000508597 KRTAP19-5Q3LI72 72 aa2.01□□□□□ -2.09
HMGB1P44-201ENST00000508597 SPRR2EP22531 72 aa2□□□□□ -2.09
HMGB1P44-201ENST00000508597 SPRR2BP35325 72 aa2□□□□□ -2.09
HMGB1P44-201ENST00000508597 SPRR2AP35326 72 aa2□□□□□ -2.09
HMGB1P44-201ENST00000508597 KRTAP12-3P60328 96 aa1.99□□□□□ -2.09
HMGB1P44-201ENST00000508597 MT1GP13640 62 aa1.97□□□□□ -2.09
HMGB1P44-201ENST00000508597 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
HMGB1P44-201ENST00000508597 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
HMGB1P44-201ENST00000508597 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
HMGB1P44-201ENST00000508597 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
HMGB1P44-201ENST00000508597 SPRR2DP22532 72 aa1.94□□□□□ -2.1
HMGB1P44-201ENST00000508597 MT1LQ93083 61 aa1.94□□□□□ -2.1
HMGB1P44-201ENST00000508597 DSTQ03001 7570 aaKnown RBP1.93□□□□□ -2.1
HMGB1P44-201ENST00000508597 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
HMGB1P44-201ENST00000508597 MT1MQ8N339 61 aa1.89□□□□□ -2.11
HMGB1P44-201ENST00000508597 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
HMGB1P44-201ENST00000508597 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
HMGB1P44-201ENST00000508597 HMCN1Q96RW7 5635 aa1.73□□□□□ -2.13
HMGB1P44-201ENST00000508597 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.14
HMGB1P44-201ENST00000508597 INE1O15225 51 aa1.68□□□□□ -2.14
HMGB1P44-201ENST00000508597 KRTAP12-4P60329 112 aa1.68□□□□□ -2.14
HMGB1P44-201ENST00000508597 MT1AP04731 61 aa1.67□□□□□ -2.14
HMGB1P44-201ENST00000508597 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
HMGB1P44-201ENST00000508597 MT4P47944 62 aa1.66□□□□□ -2.14
HMGB1P44-201ENST00000508597 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
HMGB1P44-201ENST00000508597 KRTAP20-2Q3LI61 65 aa1.62□□□□□ -2.15
HMGB1P44-201ENST00000508597 KRTAP6-1Q3LI64 71 aa1.62□□□□□ -2.15
HMGB1P44-201ENST00000508597 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
HMGB1P44-201ENST00000508597 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
HMGB1P44-201ENST00000508597 KRTAP6-2Q3LI66 62 aa1.52□□□□□ -2.17
HMGB1P44-201ENST00000508597 MUC5ACP98088 5654 aa1.52□□□□□ -2.17
HMGB1P44-201ENST00000508597 PRM1P04553 51 aa1.11□□□□□ -2.23
HMGB1P44-201ENST00000508597 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
HMGB1P44-201ENST00000508597 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
HMGB1P44-201ENST00000508597 KRTAP21-1Q3LI58 79 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 235.3 ms