RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TNXBP22105 4242 aa2.28□□□□□ -2.04
PDLIM5-211ENST00000508531 A0A0D9SG42 100 aa2.27□□□□□ -2.05
PDLIM5-211ENST00000508531 MT1HL1P0DM35 61 aa2.26□□□□□ -2.05
PDLIM5-211ENST00000508531 C10orf95Q9H7T3 257 aa2.26□□□□□ -2.05
PDLIM5-211ENST00000508531 LPAP08519 4548 aa2.26□□□□□ -2.05
PDLIM5-211ENST00000508531 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
PDLIM5-211ENST00000508531 PRO2289Q9P1D8 64 aa2.25□□□□□ -2.05
PDLIM5-211ENST00000508531 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
PDLIM5-211ENST00000508531 DNAH8Q96JB1 4490 aa2.24□□□□□ -2.05
PDLIM5-211ENST00000508531 INE1O15225 51 aa2.23□□□□□ -2.05
PDLIM5-211ENST00000508531 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
PDLIM5-211ENST00000508531 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
PDLIM5-211ENST00000508531 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
PDLIM5-211ENST00000508531 SPRR5A0A1B0GTR4 108 aa2.16□□□□□ -2.06
PDLIM5-211ENST00000508531 C9orf92A6NGG3 77 aa2.13□□□□□ -2.07
PDLIM5-211ENST00000508531 R4GN34 69 aa2.11□□□□□ -2.07
PDLIM5-211ENST00000508531 TNP1P09430 55 aa2.06□□□□□ -2.08
PDLIM5-211ENST00000508531 FCGBPQ9Y6R7 5405 aaPredicted RBP2.04□□□□□ -2.08
PDLIM5-211ENST00000508531 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
PDLIM5-211ENST00000508531 SSPOA2VEC9 5147 aa2.03□□□□□ -2.08
PDLIM5-211ENST00000508531 USH2AO75445 5202 aa2.03□□□□□ -2.09
PDLIM5-211ENST00000508531 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
PDLIM5-211ENST00000508531 MUC17Q685J3 4493 aa2.01□□□□□ -2.09
PDLIM5-211ENST00000508531 KRTAP4-1Q9BYQ7 146 aa1.98□□□□□ -2.09
PDLIM5-211ENST00000508531 MT1HP80294 61 aa1.95□□□□□ -2.1
PDLIM5-211ENST00000508531 M0R2T5 61 aa1.93□□□□□ -2.1
PDLIM5-211ENST00000508531 NEBP20929 6669 aa1.92□□□□□ -2.1
PDLIM5-211ENST00000508531 KRTAP20-1Q3LI63 56 aa1.92□□□□□ -2.1
PDLIM5-211ENST00000508531 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
PDLIM5-211ENST00000508531 MUC12Q9UKN1 5478 aa1.91□□□□□ -2.1
PDLIM5-211ENST00000508531 KRTAP19-2Q3LHN2 52 aa1.9□□□□□ -2.11
PDLIM5-211ENST00000508531 KRTAP6-3Q3LI67 103 aa1.89□□□□□ -2.11
PDLIM5-211ENST00000508531 FLGP20930 4061 aaPredicted RBP1.86□□□□□ -2.11
PDLIM5-211ENST00000508531 KMT2DO14686 5537 aa1.86□□□□□ -2.11
PDLIM5-211ENST00000508531 MDN1Q9NU22 5596 aa1.82□□□□□ -2.12
PDLIM5-211ENST00000508531 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
PDLIM5-211ENST00000508531 KRTAP12-4P60329 112 aa1.81□□□□□ -2.12
PDLIM5-211ENST00000508531 KRTAP8-1Q8IUC2 63 aa1.8□□□□□ -2.12
PDLIM5-211ENST00000508531 KRTAP2-3P0C7H8 128 aa1.78□□□□□ -2.12
PDLIM5-211ENST00000508531 KRTAP2-4Q9BYR9 128 aa1.78□□□□□ -2.12
PDLIM5-211ENST00000508531 KRTAP19-6Q3LI70 58 aa1.77□□□□□ -2.13
PDLIM5-211ENST00000508531 KRTAP12-3P60328 96 aa1.76□□□□□ -2.13
PDLIM5-211ENST00000508531 MT2AP02795 61 aa1.74□□□□□ -2.13
PDLIM5-211ENST00000508531 MT1FP04733 61 aa1.74□□□□□ -2.13
PDLIM5-211ENST00000508531 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
PDLIM5-211ENST00000508531 SPRR2GQ9BYE4 73 aa1.71□□□□□ -2.14
PDLIM5-211ENST00000508531 KRTAP2-1Q9BYU5 128 aa1.7□□□□□ -2.14
PDLIM5-211ENST00000508531 SPRR2EP22531 72 aa1.65□□□□□ -2.15
PDLIM5-211ENST00000508531 SPRR2BP35325 72 aa1.65□□□□□ -2.15
PDLIM5-211ENST00000508531 SPRR2AP35326 72 aa1.65□□□□□ -2.15
PDLIM5-211ENST00000508531 SPRR2FQ96RM1 72 aa1.6□□□□□ -2.15
PDLIM5-211ENST00000508531 SPRR2DP22532 72 aa1.59□□□□□ -2.15
PDLIM5-211ENST00000508531 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.15
PDLIM5-211ENST00000508531 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
PDLIM5-211ENST00000508531 DSTQ03001 7570 aaKnown RBP1.53□□□□□ -2.17
PDLIM5-211ENST00000508531 MT1XP80297 61 aa1.51□□□□□ -2.17
PDLIM5-211ENST00000508531 MT1BP07438 61 aa1.5□□□□□ -2.17
PDLIM5-211ENST00000508531 KRTAP5-10Q6L8G5 202 aa1.5□□□□□ -2.17
PDLIM5-211ENST00000508531 KRTAP19-5Q3LI72 72 aa1.48□□□□□ -2.17
PDLIM5-211ENST00000508531 MT4P47944 62 aa1.45□□□□□ -2.18
PDLIM5-211ENST00000508531 MT1EP04732 61 aa1.42□□□□□ -2.18
PDLIM5-211ENST00000508531 AHNAKQ09666 5890 aaKnown RBP1.4□□□□□ -2.19
PDLIM5-211ENST00000508531 MT1LQ93083 61 aa1.4□□□□□ -2.19
PDLIM5-211ENST00000508531 MT1AP04731 61 aa1.39□□□□□ -2.19
PDLIM5-211ENST00000508531 KRTAP19-7Q3SYF9 63 aa1.33□□□□□ -2.2
PDLIM5-211ENST00000508531 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
PDLIM5-211ENST00000508531 PRM1P04553 51 aa1.31□□□□□ -2.2
PDLIM5-211ENST00000508531 MUC5ACP98088 5654 aa1.29□□□□□ -2.2
PDLIM5-211ENST00000508531 MT1GP13640 62 aa1.27□□□□□ -2.21
PDLIM5-211ENST00000508531 KRTAP19-3Q7Z4W3 81 aa1.24□□□□□ -2.21
PDLIM5-211ENST00000508531 KRTAP20-2Q3LI61 65 aa1.23□□□□□ -2.21
PDLIM5-211ENST00000508531 MT1MQ8N339 61 aa1.21□□□□□ -2.22
PDLIM5-211ENST00000508531 KRTAP6-2Q3LI66 62 aa1.18□□□□□ -2.22
PDLIM5-211ENST00000508531 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
PDLIM5-211ENST00000508531 KRTAP6-1Q3LI64 71 aa1.09□□□□□ -2.23
PDLIM5-211ENST00000508531 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
PDLIM5-211ENST00000508531 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
PDLIM5-211ENST00000508531 KRTAP21-1Q3LI58 79 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 135.8 ms