RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 KRTAP19-7Q3SYF9 63 aa0.19□□□□□ -2.38
GYPA-205ENST00000508337 FRYLO94915 3013 aa0.19□□□□□ -2.38
GYPA-205ENST00000508337 MUC17Q685J3 4493 aa0.18□□□□□ -2.38
GYPA-205ENST00000508337 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
GYPA-205ENST00000508337 MT1XP80297 61 aa0.17□□□□□ -2.38
GYPA-205ENST00000508337 CEP295Q9C0D2 2601 aa0.16□□□□□ -2.38
GYPA-205ENST00000508337 KRTAP19-8Q3LI54 63 aa0.16□□□□□ -2.38
GYPA-205ENST00000508337 KMT2CQ8NEZ4 4911 aaKnown RBP0.16□□□□□ -2.38
GYPA-205ENST00000508337 MYO9AB2RTY4 2548 aa0.15□□□□□ -2.39
GYPA-205ENST00000508337 TLN1Q9Y490 2541 aaKnown RBP0.15□□□□□ -2.39
GYPA-205ENST00000508337 USH2AO75445 5202 aa0.15□□□□□ -2.39
GYPA-205ENST00000508337 KIAA1109Q2LD37 5005 aa0.15□□□□□ -2.39
GYPA-205ENST00000508337 LAMA2P24043 3122 aaKnown RBP0.15□□□□□ -2.39
GYPA-205ENST00000508337 SRCAPQ6ZRS2 3230 aa0.14□□□□□ -2.39
GYPA-205ENST00000508337 Q9Y3F1 56 aa0.14□□□□□ -2.39
GYPA-205ENST00000508337 RYR2Q92736 4967 aa0.14□□□□□ -2.39
GYPA-205ENST00000508337 STARD9Q9P2P6 4700 aa0.14□□□□□ -2.39
GYPA-205ENST00000508337 SMG1Q96Q15 3661 aaKnown RBP0.13□□□□□ -2.39
GYPA-205ENST00000508337 HTN3P15516 51 aa0.13□□□□□ -2.39
GYPA-205ENST00000508337 MUC2Q02817 5179 aa0.12□□□□□ -2.39
GYPA-205ENST00000508337 DNAH5Q8TE73 4624 aa0.11□□□□□ -2.39
GYPA-205ENST00000508337 MUC12Q9UKN1 5478 aa0.11□□□□□ -2.39
GYPA-205ENST00000508337 MT1GP13640 62 aa0.11□□□□□ -2.39
GYPA-205ENST00000508337 RYR3Q15413 4870 aa0.11□□□□□ -2.39
GYPA-205ENST00000508337 DMDP11532 3685 aa0.1□□□□□ -2.39
GYPA-205ENST00000508337 RYR1P21817 5038 aa0.1□□□□□ -2.39
GYPA-205ENST00000508337 MKI67P46013 3256 aaKnown RBP0.1□□□□□ -2.39
GYPA-205ENST00000508337 VPS13CQ709C8 3753 aa0.08□□□□□ -2.4
GYPA-205ENST00000508337 EPPK1P58107 5090 aaKnown RBP0.08□□□□□ -2.4
GYPA-205ENST00000508337 RNF213Q63HN8 5207 aa0.08□□□□□ -2.4
GYPA-205ENST00000508337 HYDINQ4G0P3 5121 aa0.07□□□□□ -2.4
GYPA-205ENST00000508337 UBR4Q5T4S7 5183 aa0.07□□□□□ -2.4
GYPA-205ENST00000508337 CSMD2Q7Z408 3487 aa0.07□□□□□ -2.4
GYPA-205ENST00000508337 WDFY4Q6ZS81 3184 aa0.07□□□□□ -2.4
GYPA-205ENST00000508337 KRTAP20-1Q3LI63 56 aa0.07□□□□□ -2.4
GYPA-205ENST00000508337 ABCA13Q86UQ4 5058 aa0.07□□□□□ -2.4
GYPA-205ENST00000508337 COX14Q96I36 57 aa0.06□□□□□ -2.4
GYPA-205ENST00000508337 SZT2Q5T011 3432 aa0.06□□□□□ -2.4
GYPA-205ENST00000508337 TRRAPQ9Y4A5 3859 aa0.05□□□□□ -2.4
GYPA-205ENST00000508337 HERC2O95714 4834 aa0.04□□□□□ -2.4
GYPA-205ENST00000508337 BIRC6Q9NR09 4857 aa0.04□□□□□ -2.4
GYPA-205ENST00000508337 KRTAP6-1Q3LI64 71 aa0.04□□□□□ -2.4
GYPA-205ENST00000508337 FREM2Q5SZK8 3169 aa0.03□□□□□ -2.4
GYPA-205ENST00000508337 DNHD1Q96M86 4753 aa0.03□□□□□ -2.41
GYPA-205ENST00000508337 DCHS1Q96JQ0 3298 aa0.02□□□□□ -2.41
GYPA-205ENST00000508337 BOD1L1Q8NFC6 3051 aa0.01□□□□□ -2.41
GYPA-205ENST00000508337 EYSQ5T1H1 3165 aa0□□□□□ -2.41
GYPA-205ENST00000508337 CENPEQ02224 2701 aa0□□□□□ -2.41
GYPA-205ENST00000508337 MUC3AQ02505 3323 aa0□□□□□ -2.41
GYPA-205ENST00000508337 CFAP47Q6ZTR5 3102 aa-0.01□□□□□ -2.41
GYPA-205ENST00000508337 MYO15AQ9UKN7 3530 aa-0.01□□□□□ -2.41
GYPA-205ENST00000508337 MT2AP02795 61 aa-0.02□□□□□ -2.41
GYPA-205ENST00000508337 KRTAP20-2Q3LI61 65 aa-0.02□□□□□ -2.41
GYPA-205ENST00000508337 CEP350Q5VT06 3117 aa-0.02□□□□□ -2.41
GYPA-205ENST00000508337 EP400Q96L91 3159 aa-0.03□□□□□ -2.41
GYPA-205ENST00000508337 MT1MQ8N339 61 aa-0.03□□□□□ -2.41
GYPA-205ENST00000508337 LOC400499M0QZD8 3231 aa-0.03□□□□□ -2.41
GYPA-205ENST00000508337 SPEGQ15772 3267 aa-0.04□□□□□ -2.42
GYPA-205ENST00000508337 UNC80Q8N2C7 3258 aa-0.04□□□□□ -2.42
GYPA-205ENST00000508337 PCNTO95613 3336 aa-0.05□□□□□ -2.42
GYPA-205ENST00000508337 MT1HL1P0DM35 61 aa-0.06□□□□□ -2.42
GYPA-205ENST00000508337 MT4P47944 62 aa-0.06□□□□□ -2.42
GYPA-205ENST00000508337 XIRP2A4UGR9 3374 aa-0.07□□□□□ -2.42
GYPA-205ENST00000508337 KRTAP19-6Q3LI70 58 aa-0.1□□□□□ -2.43
GYPA-205ENST00000508337 VPS13AQ96RL7 3174 aa-0.12□□□□□ -2.43
GYPA-205ENST00000508337 VCANP13611 3396 aa-0.13□□□□□ -2.43
GYPA-205ENST00000508337 CDH23Q9H251 3354 aa-0.13□□□□□ -2.43
GYPA-205ENST00000508337 CENPFP49454 3210 aa-0.14□□□□□ -2.43
GYPA-205ENST00000508337 WDFY3Q8IZQ1 3526 aa-0.14□□□□□ -2.43
GYPA-205ENST00000508337 GOLGB1Q14789 3259 aaKnown RBP-0.15□□□□□ -2.43
GYPA-205ENST00000508337 USP34Q70CQ2 3546 aa-0.17□□□□□ -2.44
GYPA-205ENST00000508337 DNAH14Q0VDD8 3507 aa-0.17□□□□□ -2.44
GYPA-205ENST00000508337 ASPMQ8IZT6 3477 aa-0.19□□□□□ -2.44
GYPA-205ENST00000508337 MT1BP07438 61 aa-0.2□□□□□ -2.44
GYPA-205ENST00000508337 BRCA2P51587 3418 aa-0.2□□□□□ -2.44
GYPA-205ENST00000508337 UTRNP46939 3433 aa-0.2□□□□□ -2.44
GYPA-205ENST00000508337 MT1FP04733 61 aa-0.25□□□□□ -2.45
GYPA-205ENST00000508337 KRTAP19-2Q3LHN2 52 aa-0.31□□□□□ -2.46
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms