RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 DSTQ03001 7570 aaKnown RBP7.1□□□□□ -1.27
SFXN1-209ENST00000508290 MT1LQ93083 61 aa7.08□□□□□ -1.28
SFXN1-209ENST00000508290 PSPHP1O15172 72 aa7.04□□□□□ -1.28
SFXN1-209ENST00000508290 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
SFXN1-209ENST00000508290 MT1MQ8N339 61 aa7.02□□□□□ -1.29
SFXN1-209ENST00000508290 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
SFXN1-209ENST00000508290 A6NED7 52 aa6.87□□□□□ -1.31
SFXN1-209ENST00000508290 RPS28P62857 69 aaKnown RBP6.86□□□□□ -1.31
SFXN1-209ENST00000508290 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
SFXN1-209ENST00000508290 GPR98Q8WXG9 6306 aa6.81□□□□□ -1.32
SFXN1-209ENST00000508290 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
SFXN1-209ENST00000508290 KRTAP4-9Q9BYQ8 210 aa6.78□□□□□ -1.32
SFXN1-209ENST00000508290 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
SFXN1-209ENST00000508290 PCP4P48539 62 aa6.75□□□□□ -1.33
SFXN1-209ENST00000508290 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
SFXN1-209ENST00000508290 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
SFXN1-209ENST00000508290 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
SFXN1-209ENST00000508290 CDC42SE1Q9NRR8 79 aa6.71□□□□□ -1.34
SFXN1-209ENST00000508290 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
SFXN1-209ENST00000508290 KRTAP5-4Q6L8H1 288 aa6.67□□□□□ -1.34
SFXN1-209ENST00000508290 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
SFXN1-209ENST00000508290 MT4P47944 62 aa6.61□□□□□ -1.35
SFXN1-209ENST00000508290 HMCN1Q96RW7 5635 aa6.59□□□□□ -1.35
SFXN1-209ENST00000508290 ROMO1P60602 79 aa6.58□□□□□ -1.36
SFXN1-209ENST00000508290 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
SFXN1-209ENST00000508290 KRTAP5-5Q701N2 237 aaPredicted RBP6.44□□□□□ -1.38
SFXN1-209ENST00000508290 LCE3CQ5T5A8 94 aa6.41□□□□□ -1.38
SFXN1-209ENST00000508290 KRTAP5-10Q6L8G5 202 aa6.36□□□□□ -1.39
SFXN1-209ENST00000508290 AHNAK2Q8IVF2 5795 aa6.34□□□□□ -1.39
SFXN1-209ENST00000508290 SPRR5A0A1B0GTR4 108 aa6.32□□□□□ -1.4
SFXN1-209ENST00000508290 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
SFXN1-209ENST00000508290 KRTAP20-2Q3LI61 65 aa6.26□□□□□ -1.41
SFXN1-209ENST00000508290 KRTAP5-7Q6L8G8 165 aa6.16□□□□□ -1.42
SFXN1-209ENST00000508290 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
SFXN1-209ENST00000508290 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
SFXN1-209ENST00000508290 MT1AP04731 61 aa6.06□□□□□ -1.44
SFXN1-209ENST00000508290 H3BS24 57 aa6.04□□□□□ -1.44
SFXN1-209ENST00000508290 BRK1Q8WUW1 75 aa5.97□□□□□ -1.45
SFXN1-209ENST00000508290 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
SFXN1-209ENST00000508290 KRTAP6-1Q3LI64 71 aa5.94□□□□□ -1.46
SFXN1-209ENST00000508290 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
SFXN1-209ENST00000508290 KRTAP4-12Q9BQ66 201 aa5.84□□□□□ -1.47
SFXN1-209ENST00000508290 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
SFXN1-209ENST00000508290 KRTAP9-9Q9BYP9 154 aa5.75□□□□□ -1.49
SFXN1-209ENST00000508290 KRTAP4-11Q9BYQ6 195 aa5.7□□□□□ -1.5
SFXN1-209ENST00000508290 KRTAP6-2Q3LI66 62 aa5.68□□□□□ -1.5
SFXN1-209ENST00000508290 PMAIP1Q13794 54 aa5.64□□□□□ -1.51
SFXN1-209ENST00000508290 MT3P25713 68 aa5.57□□□□□ -1.52
SFXN1-209ENST00000508290 KRTAP5-8O75690 187 aa5.49□□□□□ -1.53
SFXN1-209ENST00000508290 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SFXN1-209ENST00000508290 MUC5ACP98088 5654 aa5.31□□□□□ -1.56
SFXN1-209ENST00000508290 PRAC1Q96KF2 57 aa5.3□□□□□ -1.56
SFXN1-209ENST00000508290 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
SFXN1-209ENST00000508290 MUC5BQ9HC84 5762 aaPredicted RBP5.3□□□□□ -1.56
SFXN1-209ENST00000508290 KRTAP4-2Q9BYR5 136 aa5.26□□□□□ -1.57
SFXN1-209ENST00000508290 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
SFXN1-209ENST00000508290 KRTAP5-1Q6L8H4 278 aa5.21□□□□□ -1.58
SFXN1-209ENST00000508290 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
SFXN1-209ENST00000508290 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
SFXN1-209ENST00000508290 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
SFXN1-209ENST00000508290 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
SFXN1-209ENST00000508290 LCE1BQ5T7P3 118 aa4.73□□□□□ -1.65
SFXN1-209ENST00000508290 LUZP6Q538Z0 58 aa4.66□□□□□ -1.66
SFXN1-209ENST00000508290 LCE3DQ9BYE3 92 aa4.66□□□□□ -1.66
SFXN1-209ENST00000508290 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
SFXN1-209ENST00000508290 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SFXN1-209ENST00000508290 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
SFXN1-209ENST00000508290 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
SFXN1-209ENST00000508290 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
SFXN1-209ENST00000508290 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
SFXN1-209ENST00000508290 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
SFXN1-209ENST00000508290 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
SFXN1-209ENST00000508290 KRTAP4-4Q9BYR3 166 aa3.5□□□□□ -1.85
SFXN1-209ENST00000508290 MUC19Q7Z5P9 8384 aa3.32□□□□□ -1.88
SFXN1-209ENST00000508290 PRM1P04553 51 aa3.31□□□□□ -1.88
SFXN1-209ENST00000508290 INE1O15225 51 aa3.07□□□□□ -1.92
SFXN1-209ENST00000508290 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
SFXN1-209ENST00000508290 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 67.4 ms