RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
HOXC4-203ENST00000507650 KRTAP4-3Q9BYR4 195 aa5.68□□□□□ -1.5
HOXC4-203ENST00000507650 SMIM26A0A096LP01 95 aa5.66□□□□□ -1.5
HOXC4-203ENST00000507650 PP632Q6XCG6 107 aa5.65□□□□□ -1.5
HOXC4-203ENST00000507650 HMCN1Q96RW7 5635 aa5.62□□□□□ -1.51
HOXC4-203ENST00000507650 CCDC179H3BU77 68 aa5.59□□□□□ -1.51
HOXC4-203ENST00000507650 MT4P47944 62 aa5.59□□□□□ -1.51
HOXC4-203ENST00000507650 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
HOXC4-203ENST00000507650 TNP1P09430 55 aa5.56□□□□□ -1.52
HOXC4-203ENST00000507650 KRTAP5-4Q6L8H1 288 aa5.56□□□□□ -1.52
HOXC4-203ENST00000507650 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
HOXC4-203ENST00000507650 AHNAK2Q8IVF2 5795 aa5.48□□□□□ -1.53
HOXC4-203ENST00000507650 LINC01558Q9Y6Z2 57 aa5.47□□□□□ -1.53
HOXC4-203ENST00000507650 KRTAP12-3P60328 96 aa5.43□□□□□ -1.54
HOXC4-203ENST00000507650 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
HOXC4-203ENST00000507650 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
HOXC4-203ENST00000507650 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
HOXC4-203ENST00000507650 KRTAP4-11Q9BYQ6 195 aa5.34□□□□□ -1.55
HOXC4-203ENST00000507650 KRTAP5-5Q701N2 237 aaPredicted RBP5.33□□□□□ -1.56
HOXC4-203ENST00000507650 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
HOXC4-203ENST00000507650 UQCR11O14957 56 aa5.29□□□□□ -1.56
HOXC4-203ENST00000507650 TMEM258P61165 79 aa5.27□□□□□ -1.57
HOXC4-203ENST00000507650 KRTAP4-2Q9BYR5 136 aa5.27□□□□□ -1.57
HOXC4-203ENST00000507650 KRTAP15-1Q3LI76 137 aa5.26□□□□□ -1.57
HOXC4-203ENST00000507650 KRTAP20-2Q3LI61 65 aa5.23□□□□□ -1.57
HOXC4-203ENST00000507650 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
HOXC4-203ENST00000507650 MIR22HGQ0VDD5 57 aa5.19□□□□□ -1.58
HOXC4-203ENST00000507650 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
HOXC4-203ENST00000507650 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
HOXC4-203ENST00000507650 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
HOXC4-203ENST00000507650 KRTAP5-7Q6L8G8 165 aa5.13□□□□□ -1.59
HOXC4-203ENST00000507650 PSPHP1O15172 72 aa5.06□□□□□ -1.6
HOXC4-203ENST00000507650 KRTAP12-4P60329 112 aa5.05□□□□□ -1.6
HOXC4-203ENST00000507650 Q1T7F1 81 aa5□□□□□ -1.61
HOXC4-203ENST00000507650 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
HOXC4-203ENST00000507650 K7ERS5 55 aa4.98□□□□□ -1.61
HOXC4-203ENST00000507650 V9GYY9 64 aa4.93□□□□□ -1.62
HOXC4-203ENST00000507650 PCP4P48539 62 aa4.91□□□□□ -1.62
HOXC4-203ENST00000507650 KRTAP6-1Q3LI64 71 aa4.89□□□□□ -1.63
HOXC4-203ENST00000507650 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
HOXC4-203ENST00000507650 MT1AP04731 61 aa4.86□□□□□ -1.63
HOXC4-203ENST00000507650 KRTAP9-6A8MVA2 160 aa4.85□□□□□ -1.63
HOXC4-203ENST00000507650 A6NED7 52 aa4.82□□□□□ -1.64
HOXC4-203ENST00000507650 CDC42SE1Q9NRR8 79 aa4.78□□□□□ -1.64
HOXC4-203ENST00000507650 ROMO1P60602 79 aa4.74□□□□□ -1.65
HOXC4-203ENST00000507650 A0A0A0MQY5 61 aa4.7□□□□□ -1.66
HOXC4-203ENST00000507650 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
HOXC4-203ENST00000507650 KRTAP6-2Q3LI66 62 aa4.66□□□□□ -1.66
HOXC4-203ENST00000507650 RPS28P62857 69 aaKnown RBP4.64□□□□□ -1.67
HOXC4-203ENST00000507650 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
HOXC4-203ENST00000507650 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
HOXC4-203ENST00000507650 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
HOXC4-203ENST00000507650 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
HOXC4-203ENST00000507650 MT3P25713 68 aa4.39□□□□□ -1.71
HOXC4-203ENST00000507650 KRTAP5-1Q6L8H4 278 aa4.39□□□□□ -1.71
HOXC4-203ENST00000507650 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
HOXC4-203ENST00000507650 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
HOXC4-203ENST00000507650 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
HOXC4-203ENST00000507650 PRAC1Q96KF2 57 aa3.86□□□□□ -1.79
HOXC4-203ENST00000507650 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
HOXC4-203ENST00000507650 NDUFAF8A1L188 74 aa3.76□□□□□ -1.81
HOXC4-203ENST00000507650 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
HOXC4-203ENST00000507650 PMAIP1Q13794 54 aa3.69□□□□□ -1.82
HOXC4-203ENST00000507650 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
HOXC4-203ENST00000507650 LCE3DQ9BYE3 92 aa3.54□□□□□ -1.84
HOXC4-203ENST00000507650 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.47□□□□□ -1.85
HOXC4-203ENST00000507650 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
HOXC4-203ENST00000507650 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
HOXC4-203ENST00000507650 KRTAP21-2Q3LI59 83 aa3.23□□□□□ -1.89
HOXC4-203ENST00000507650 KTN1-AS1Q86SY8 53 aa3.18□□□□□ -1.9
HOXC4-203ENST00000507650 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
HOXC4-203ENST00000507650 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
HOXC4-203ENST00000507650 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
HOXC4-203ENST00000507650 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
HOXC4-203ENST00000507650 PRM1P04553 51 aa2.46□□□□□ -2.02
HOXC4-203ENST00000507650 KRTAP21-1Q3LI58 79 aa2.3□□□□□ -2.04
HOXC4-203ENST00000507650 INE1O15225 51 aa2.03□□□□□ -2.08
HOXC4-203ENST00000507650 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 73.5 ms