RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 CCDC179H3BU77 68 aa6.53□□□□□ -1.36
FGFR3-209ENST00000507588 KRTAP4-3Q9BYR4 195 aa6.47□□□□□ -1.37
FGFR3-209ENST00000507588 LINC01558Q9Y6Z2 57 aa6.47□□□□□ -1.37
FGFR3-209ENST00000507588 MT4P47944 62 aa6.45□□□□□ -1.38
FGFR3-209ENST00000507588 KRTAP5-4Q6L8H1 288 aa6.44□□□□□ -1.38
FGFR3-209ENST00000507588 AHNAK2Q8IVF2 5795 aa6.37□□□□□ -1.39
FGFR3-209ENST00000507588 KRTAP12-3P60328 96 aa6.36□□□□□ -1.39
FGFR3-209ENST00000507588 UQCR11O14957 56 aa6.34□□□□□ -1.39
FGFR3-209ENST00000507588 TMEM258P61165 79 aa6.31□□□□□ -1.4
FGFR3-209ENST00000507588 KRTAP4-6Q9BYQ5 205 aa6.28□□□□□ -1.4
FGFR3-209ENST00000507588 KRTAP4-7Q9BYR0 210 aa6.28□□□□□ -1.4
FGFR3-209ENST00000507588 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
FGFR3-209ENST00000507588 KRTAP5-10Q6L8G5 202 aa6.19□□□□□ -1.42
FGFR3-209ENST00000507588 MIR22HGQ0VDD5 57 aa6.16□□□□□ -1.42
FGFR3-209ENST00000507588 KRTAP5-5Q701N2 237 aaPredicted RBP6.15□□□□□ -1.42
FGFR3-209ENST00000507588 KRTAP20-2Q3LI61 65 aa6.07□□□□□ -1.44
FGFR3-209ENST00000507588 K7ERS5 55 aa6.06□□□□□ -1.44
FGFR3-209ENST00000507588 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
FGFR3-209ENST00000507588 KRTAP19-4Q3LI73 84 aa6.04□□□□□ -1.44
FGFR3-209ENST00000507588 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
FGFR3-209ENST00000507588 V9GYY9 64 aa5.99□□□□□ -1.45
FGFR3-209ENST00000507588 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
FGFR3-209ENST00000507588 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
FGFR3-209ENST00000507588 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
FGFR3-209ENST00000507588 SYNE1Q8NF91 8797 aaKnown RBP5.97□□□□□ -1.45
FGFR3-209ENST00000507588 PSPHP1O15172 72 aa5.96□□□□□ -1.46
FGFR3-209ENST00000507588 KRTAP5-7Q6L8G8 165 aa5.96□□□□□ -1.46
FGFR3-209ENST00000507588 Q1T7F1 81 aa5.95□□□□□ -1.46
FGFR3-209ENST00000507588 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
FGFR3-209ENST00000507588 LCE3CQ5T5A8 94 aa5.84□□□□□ -1.47
FGFR3-209ENST00000507588 A6NED7 52 aa5.76□□□□□ -1.49
FGFR3-209ENST00000507588 CDC42SE1Q9NRR8 79 aa5.74□□□□□ -1.49
FGFR3-209ENST00000507588 MT1AP04731 61 aa5.68□□□□□ -1.5
FGFR3-209ENST00000507588 ROMO1P60602 79 aa5.64□□□□□ -1.51
FGFR3-209ENST00000507588 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
FGFR3-209ENST00000507588 KRTAP6-1Q3LI64 71 aa5.63□□□□□ -1.51
FGFR3-209ENST00000507588 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
FGFR3-209ENST00000507588 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
FGFR3-209ENST00000507588 KRTAP9-6A8MVA2 160 aa5.53□□□□□ -1.52
FGFR3-209ENST00000507588 KRTAP9-4Q9BYQ2 154 aa5.47□□□□□ -1.53
FGFR3-209ENST00000507588 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
FGFR3-209ENST00000507588 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
FGFR3-209ENST00000507588 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
FGFR3-209ENST00000507588 MUC5BQ9HC84 5762 aaPredicted RBP5.25□□□□□ -1.57
FGFR3-209ENST00000507588 AHNAKQ09666 5890 aaKnown RBP5.23□□□□□ -1.57
FGFR3-209ENST00000507588 MUC5ACP98088 5654 aa5.23□□□□□ -1.57
FGFR3-209ENST00000507588 PCP4P48539 62 aa5.21□□□□□ -1.58
FGFR3-209ENST00000507588 MT3P25713 68 aa5.18□□□□□ -1.58
FGFR3-209ENST00000507588 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
FGFR3-209ENST00000507588 KRTAP5-1Q6L8H4 278 aa5.06□□□□□ -1.6
FGFR3-209ENST00000507588 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
FGFR3-209ENST00000507588 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
FGFR3-209ENST00000507588 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
FGFR3-209ENST00000507588 LCE1CQ5T751 118 aa4.47□□□□□ -1.69
FGFR3-209ENST00000507588 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
FGFR3-209ENST00000507588 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
FGFR3-209ENST00000507588 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
FGFR3-209ENST00000507588 LCE3DQ9BYE3 92 aa4.18□□□□□ -1.74
FGFR3-209ENST00000507588 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
FGFR3-209ENST00000507588 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
FGFR3-209ENST00000507588 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.07□□□□□ -1.76
FGFR3-209ENST00000507588 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
FGFR3-209ENST00000507588 PRO0628Q9UI54 55 aa3.98□□□□□ -1.77
FGFR3-209ENST00000507588 LCE3EQ5T5B0 92 aa3.92□□□□□ -1.78
FGFR3-209ENST00000507588 KTN1-AS1Q86SY8 53 aa3.88□□□□□ -1.79
FGFR3-209ENST00000507588 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
FGFR3-209ENST00000507588 SVIPQ8NHG7 77 aa3.71□□□□□ -1.82
FGFR3-209ENST00000507588 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
FGFR3-209ENST00000507588 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
FGFR3-209ENST00000507588 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
FGFR3-209ENST00000507588 MUC19Q7Z5P9 8384 aa3.31□□□□□ -1.88
FGFR3-209ENST00000507588 PRM1P04553 51 aa2.87□□□□□ -1.95
FGFR3-209ENST00000507588 NDUFAF8A1L188 74 aa2.74□□□□□ -1.97
FGFR3-209ENST00000507588 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
FGFR3-209ENST00000507588 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
FGFR3-209ENST00000507588 INE1O15225 51 aa2.18□□□□□ -2.06
FGFR3-209ENST00000507588 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
FGFR3-209ENST00000507588 H3BS24 57 aa1.99□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 74.2 ms