RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 RYR1P21817 5038 aa1.08□□□□□ -2.24
HMGB3P15-201ENST00000507326 MUC17Q685J3 4493 aa1.08□□□□□ -2.24
HMGB3P15-201ENST00000507326 SRRM2Q9UQ35 2752 aaKnown RBP1.08□□□□□ -2.24
HMGB3P15-201ENST00000507326 RPS29P62273 56 aaKnown RBP1.07□□□□□ -2.24
HMGB3P15-201ENST00000507326 KMT2CQ8NEZ4 4911 aaKnown RBP1.06□□□□□ -2.24
HMGB3P15-201ENST00000507326 LPAP08519 4548 aa1.05□□□□□ -2.24
HMGB3P15-201ENST00000507326 RYR3Q15413 4870 aa1.03□□□□□ -2.24
HMGB3P15-201ENST00000507326 TGP01266 2768 aa1.02□□□□□ -2.25
HMGB3P15-201ENST00000507326 HERC1Q15751 4861 aa1.01□□□□□ -2.25
HMGB3P15-201ENST00000507326 LRP2P98164 4655 aa1.01□□□□□ -2.25
HMGB3P15-201ENST00000507326 DMBT1Q9UGM3 2413 aaPredicted RBP1□□□□□ -2.25
HMGB3P15-201ENST00000507326 FLGP20930 4061 aaPredicted RBP1□□□□□ -2.25
HMGB3P15-201ENST00000507326 MT1HL1P0DM35 61 aa1□□□□□ -2.25
HMGB3P15-201ENST00000507326 KIAA1109Q2LD37 5005 aa1□□□□□ -2.25
HMGB3P15-201ENST00000507326 BIRC6Q9NR09 4857 aa1□□□□□ -2.25
HMGB3P15-201ENST00000507326 EPPK1P58107 5090 aaKnown RBP0.99□□□□□ -2.25
HMGB3P15-201ENST00000507326 KRTAP19-2Q3LHN2 52 aa0.99□□□□□ -2.25
HMGB3P15-201ENST00000507326 ABCA13Q86UQ4 5058 aa0.97□□□□□ -2.25
HMGB3P15-201ENST00000507326 HERC2O95714 4834 aa0.96□□□□□ -2.26
HMGB3P15-201ENST00000507326 SMR3BP02814 79 aaPredicted RBP0.95□□□□□ -2.26
HMGB3P15-201ENST00000507326 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
HMGB3P15-201ENST00000507326 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
HMGB3P15-201ENST00000507326 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
HMGB3P15-201ENST00000507326 PCLOQ9Y6V0 5065 aa0.91□□□□□ -2.26
HMGB3P15-201ENST00000507326 HMCN2Q8NDA2 5059 aa0.9□□□□□ -2.26
HMGB3P15-201ENST00000507326 PRM1P04553 51 aa0.87□□□□□ -2.27
HMGB3P15-201ENST00000507326 KRTAP19-3Q7Z4W3 81 aa0.87□□□□□ -2.27
HMGB3P15-201ENST00000507326 FAT4Q6V0I7 4981 aa0.85□□□□□ -2.27
HMGB3P15-201ENST00000507326 UBR4Q5T4S7 5183 aa0.85□□□□□ -2.27
HMGB3P15-201ENST00000507326 SPRR2GQ9BYE4 73 aa0.84□□□□□ -2.27
HMGB3P15-201ENST00000507326 RNF213Q63HN8 5207 aa0.83□□□□□ -2.28
HMGB3P15-201ENST00000507326 KRTAP19-8Q3LI54 63 aa0.83□□□□□ -2.28
HMGB3P15-201ENST00000507326 MUC2Q02817 5179 aa0.82□□□□□ -2.28
HMGB3P15-201ENST00000507326 MT1FP04733 61 aa0.82□□□□□ -2.28
HMGB3P15-201ENST00000507326 MT1BP07438 61 aa0.82□□□□□ -2.28
HMGB3P15-201ENST00000507326 MT1HP80294 61 aa0.82□□□□□ -2.28
HMGB3P15-201ENST00000507326 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
HMGB3P15-201ENST00000507326 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
HMGB3P15-201ENST00000507326 MT2AP02795 61 aa0.81□□□□□ -2.28
HMGB3P15-201ENST00000507326 SPRR2DP22532 72 aa0.81□□□□□ -2.28
HMGB3P15-201ENST00000507326 SPRR2BP35325 72 aa0.81□□□□□ -2.28
HMGB3P15-201ENST00000507326 MT1XP80297 61 aa0.8□□□□□ -2.28
HMGB3P15-201ENST00000507326 KRTAP5-10Q6L8G5 202 aa0.77□□□□□ -2.29
HMGB3P15-201ENST00000507326 SPRR2AP35326 72 aa0.76□□□□□ -2.29
HMGB3P15-201ENST00000507326 MT1AP04731 61 aa0.75□□□□□ -2.29
HMGB3P15-201ENST00000507326 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
HMGB3P15-201ENST00000507326 USH2AO75445 5202 aa0.73□□□□□ -2.29
HMGB3P15-201ENST00000507326 KMT2DO14686 5537 aa0.72□□□□□ -2.29
HMGB3P15-201ENST00000507326 KRTAP19-5Q3LI72 72 aa0.71□□□□□ -2.3
HMGB3P15-201ENST00000507326 SSPOA2VEC9 5147 aa0.71□□□□□ -2.3
HMGB3P15-201ENST00000507326 MT1EP04732 61 aa0.7□□□□□ -2.3
HMGB3P15-201ENST00000507326 MT1LQ93083 61 aa0.69□□□□□ -2.3
HMGB3P15-201ENST00000507326 KRTAP21-1Q3LI58 79 aa0.68□□□□□ -2.3
HMGB3P15-201ENST00000507326 KRTAP19-6Q3LI70 58 aa0.68□□□□□ -2.3
HMGB3P15-201ENST00000507326 SPRR2EP22531 72 aa0.64□□□□□ -2.31
HMGB3P15-201ENST00000507326 MT1MQ8N339 61 aa0.64□□□□□ -2.31
HMGB3P15-201ENST00000507326 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
HMGB3P15-201ENST00000507326 KRTAP6-2Q3LI66 62 aa0.62□□□□□ -2.31
HMGB3P15-201ENST00000507326 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
HMGB3P15-201ENST00000507326 MUC12Q9UKN1 5478 aa0.61□□□□□ -2.31
HMGB3P15-201ENST00000507326 MT1GP13640 62 aa0.6□□□□□ -2.31
HMGB3P15-201ENST00000507326 AHNAK2Q8IVF2 5795 aa0.59□□□□□ -2.32
HMGB3P15-201ENST00000507326 KRTAP6-1Q3LI64 71 aa0.58□□□□□ -2.32
HMGB3P15-201ENST00000507326 MDN1Q9NU22 5596 aa0.56□□□□□ -2.32
HMGB3P15-201ENST00000507326 MACF1Q9UPN3 7388 aaKnown RBP0.54□□□□□ -2.32
HMGB3P15-201ENST00000507326 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.33
HMGB3P15-201ENST00000507326 DSTQ03001 7570 aaKnown RBP0.51□□□□□ -2.33
HMGB3P15-201ENST00000507326 SYNE2Q8WXH0 6885 aaKnown RBP0.48□□□□□ -2.33
HMGB3P15-201ENST00000507326 MUC5BQ9HC84 5762 aaPredicted RBP0.48□□□□□ -2.33
HMGB3P15-201ENST00000507326 NEBP20929 6669 aa0.48□□□□□ -2.33
HMGB3P15-201ENST00000507326 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
HMGB3P15-201ENST00000507326 KRTAP20-2Q3LI61 65 aa0.47□□□□□ -2.33
HMGB3P15-201ENST00000507326 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
HMGB3P15-201ENST00000507326 KRTAP20-1Q3LI63 56 aa0.43□□□□□ -2.34
HMGB3P15-201ENST00000507326 MT4P47944 62 aa0.39□□□□□ -2.35
HMGB3P15-201ENST00000507326 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
HMGB3P15-201ENST00000507326 GPR98Q8WXG9 6306 aa0.28□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 52.3 ms