RNA–Protein interactions for RNA: ENST00000507229.5

MIB2-222, Transcript of mindbomb E3 ubiquitin protein ligase 2, human

TSL 2

Gene MIB2, Length 2,582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MIB2-222	ENST00000507229	KRTAP19-4	Q3LI73	84 aa		6.49	□□□□□ -1.37
MIB2-222	ENST00000507229	LOC100996750	A0A140TA64	210 aa		6.48	□□□□□ -1.37
MIB2-222	ENST00000507229	KRTAP19-6	Q3LI70	58 aa		6.43	□□□□□ -1.38
MIB2-222	ENST00000507229	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	6.43	□□□□□ -1.38
MIB2-222	ENST00000507229	MUC12	Q9UKN1	5478 aa		6.4	□□□□□ -1.38
MIB2-222	ENST00000507229	MT1G	P13640	62 aa		6.37	□□□□□ -1.39
MIB2-222	ENST00000507229	LCE2D	Q5TA82	110 aa	Predicted RBP	6.37	□□□□□ -1.39
MIB2-222	ENST00000507229	KRTAP12-4	P60329	112 aa		6.36	□□□□□ -1.39
MIB2-222	ENST00000507229	CRCT1	Q9UGL9	99 aa		6.31	□□□□□ -1.4
MIB2-222	ENST00000507229	MT1M	Q8N339	61 aa		6.26	□□□□□ -1.41
MIB2-222	ENST00000507229	KRTAP19-3	Q7Z4W3	81 aa		6.22	□□□□□ -1.41
MIB2-222	ENST00000507229	DST	Q03001	7570 aa	Known RBP	6.19	□□□□□ -1.42
MIB2-222	ENST00000507229	SPRR2F	Q96RM1	72 aa		6.02	□□□□□ -1.45
MIB2-222	ENST00000507229	LCE5A	Q5TCM9	118 aa		6	□□□□□ -1.45
MIB2-222	ENST00000507229	LCE3B	Q5TA77	95 aa		5.93	□□□□□ -1.46
MIB2-222	ENST00000507229	MACF1	Q9UPN3	7388 aa	Known RBP	5.9	□□□□□ -1.47
MIB2-222	ENST00000507229	KRTAP4-9	Q9BYQ8	210 aa		5.89	□□□□□ -1.47
MIB2-222	ENST00000507229	SYNE1	Q8NF91	8797 aa	Known RBP	5.81	□□□□□ -1.48
MIB2-222	ENST00000507229	KRTAP6-1	Q3LI64	71 aa		5.76	□□□□□ -1.49
MIB2-222	ENST00000507229	KRTAP9-2	Q9BYQ4	174 aa		5.76	□□□□□ -1.49
MIB2-222	ENST00000507229	SYNE2	Q8WXH0	6885 aa	Known RBP	5.74	□□□□□ -1.49
MIB2-222	ENST00000507229	MDN1	Q9NU22	5596 aa		5.73	□□□□□ -1.49
MIB2-222	ENST00000507229	KRTAP9-7	A8MTY7	169 aa		5.72	□□□□□ -1.49
MIB2-222	ENST00000507229	PRM1	P04553	51 aa		5.72	□□□□□ -1.49
MIB2-222	ENST00000507229	MT1A	P04731	61 aa		5.61	□□□□□ -1.51
MIB2-222	ENST00000507229	KRTAP5-5	Q701N2	237 aa	Predicted RBP	5.61	□□□□□ -1.51
MIB2-222	ENST00000507229	LCE3D	Q9BYE3	92 aa		5.59	□□□□□ -1.52
MIB2-222	ENST00000507229	LCE3E	Q5T5B0	92 aa		5.57	□□□□□ -1.52
MIB2-222	ENST00000507229	LCE1A	Q5T7P2	110 aa		5.55	□□□□□ -1.52
MIB2-222	ENST00000507229	KRTAP6-3	Q3LI67	103 aa		5.51	□□□□□ -1.53
MIB2-222	ENST00000507229	KRTAP9-6	A0A140TA67	174 aa		5.48	□□□□□ -1.53
MIB2-222	ENST00000507229	SPRR2E	P22531	72 aa		5.41	□□□□□ -1.54
MIB2-222	ENST00000507229	KRTAP5-9	P26371	169 aa		5.41	□□□□□ -1.54
MIB2-222	ENST00000507229	SPRR2B	P35325	72 aa		5.41	□□□□□ -1.54
MIB2-222	ENST00000507229	SPRR2A	P35326	72 aa		5.41	□□□□□ -1.54
MIB2-222	ENST00000507229	OBSCN	Q5VST9	7968 aa		5.31	□□□□□ -1.56
MIB2-222	ENST00000507229	KRTAP2-2	Q9BYT5	123 aa		5.3	□□□□□ -1.56
MIB2-222	ENST00000507229	KRTAP6-2	Q3LI66	62 aa		5.29	□□□□□ -1.56
MIB2-222	ENST00000507229	KRTAP9-4	Q9BYQ2	154 aa		5.28	□□□□□ -1.56
MIB2-222	ENST00000507229	SPRR2D	P22532	72 aa		5.15	□□□□□ -1.58
MIB2-222	ENST00000507229	MT3	P25713	68 aa		5.02	□□□□□ -1.61
MIB2-222	ENST00000507229	LCE1E	Q5T753	118 aa		4.98	□□□□□ -1.61
MIB2-222	ENST00000507229	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.91	□□□□□ -1.62
MIB2-222	ENST00000507229	LCE1D	Q5T752	114 aa		4.79	□□□□□ -1.64
MIB2-222	ENST00000507229	KRTAP5-4	Q6L8H1	288 aa		4.72	□□□□□ -1.65
MIB2-222	ENST00000507229	KRTAP4-6	Q9BYQ5	205 aa		4.69	□□□□□ -1.66
MIB2-222	ENST00000507229	MT4	P47944	62 aa		4.64	□□□□□ -1.67
MIB2-222	ENST00000507229	NEB	P20929	6669 aa		4.53	□□□□□ -1.68
MIB2-222	ENST00000507229	KRTAP20-2	Q3LI61	65 aa		4.49	□□□□□ -1.69
MIB2-222	ENST00000507229	KRTAP5-2	Q701N4	177 aa		4.44	□□□□□ -1.7
MIB2-222	ENST00000507229	HMCN1	Q96RW7	5635 aa		4.39	□□□□□ -1.71
MIB2-222	ENST00000507229	LCE4A	Q5TA78	99 aa		4.34	□□□□□ -1.71
MIB2-222	ENST00000507229	MUC5AC	P98088	5654 aa		4.33	□□□□□ -1.72
MIB2-222	ENST00000507229	KRTAP4-11	Q9BYQ6	195 aa		4.29	□□□□□ -1.72
MIB2-222	ENST00000507229	KRTAP5-3	Q6L8H2	238 aa		4.24	□□□□□ -1.73
MIB2-222	ENST00000507229	LCE1B	Q5T7P3	118 aa		4.15	□□□□□ -1.74
MIB2-222	ENST00000507229	KRTAP20-1	Q3LI63	56 aa		4.12	□□□□□ -1.75
MIB2-222	ENST00000507229	KRTAP5-10	Q6L8G5	202 aa		4.04	□□□□□ -1.76
MIB2-222	ENST00000507229	LCE1F	Q5T754	118 aa		3.99	□□□□□ -1.77
MIB2-222	ENST00000507229	KRTAP5-1	Q6L8H4	278 aa		3.93	□□□□□ -1.78
MIB2-222	ENST00000507229	KRTAP4-2	Q9BYR5	136 aa		3.89	□□□□□ -1.79
MIB2-222	ENST00000507229	LCE1C	Q5T751	118 aa		3.82	□□□□□ -1.8
MIB2-222	ENST00000507229	MUC19	Q7Z5P9	8384 aa		3.69	□□□□□ -1.82
MIB2-222	ENST00000507229	KRTAP21-2	Q3LI59	83 aa		3.68	□□□□□ -1.82
MIB2-222	ENST00000507229	KRTAP21-1	Q3LI58	79 aa		3.59	□□□□□ -1.83
MIB2-222	ENST00000507229	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.57	□□□□□ -1.84
MIB2-222	ENST00000507229	KRTAP5-8	O75690	187 aa		3.51	□□□□□ -1.85
MIB2-222	ENST00000507229	KRTAP4-4	Q9BYR3	166 aa		3.5	□□□□□ -1.85
MIB2-222	ENST00000507229	KRTAP5-7	Q6L8G8	165 aa		3.38	□□□□□ -1.87
MIB2-222	ENST00000507229	AHNAK2	Q8IVF2	5795 aa		3.37	□□□□□ -1.87
MIB2-222	ENST00000507229	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.28	□□□□□ -1.88
MIB2-222	ENST00000507229	KRTAP5-11	Q6L8G4	156 aa		3.25	□□□□□ -1.89
MIB2-222	ENST00000507229	KRTAP4-12	Q9BQ66	201 aa		3.24	□□□□□ -1.89
MIB2-222	ENST00000507229	GPR98	Q8WXG9	6306 aa		3.05	□□□□□ -1.92
MIB2-222	ENST00000507229	KRTAP9-9	Q9BYP9	154 aa		2.9	□□□□□ -1.94
MIB2-222	ENST00000507229	PHGR1	C9JFL3	82 aa		2.84	□□□□□ -1.95
MIB2-222	ENST00000507229	AHNAK	Q09666	5890 aa	Known RBP	2.5	□□□□□ -2.01
MIB2-222	ENST00000507229	MUC16	Q8WXI7	14507 aa		1.91	□□□□□ -2.1

Retrieved 78 of 20,778 RNA–protein pairs in 12.6 ms