RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
GYPB-208ENST00000507009 MT1MQ8N339 61 aa2.06□□□□□ -2.08
GYPB-208ENST00000507009 ACYP2P14621 99 aa2.05□□□□□ -2.08
GYPB-208ENST00000507009 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
GYPB-208ENST00000507009 LCE3AQ5TA76 89 aa2.05□□□□□ -2.08
GYPB-208ENST00000507009 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
GYPB-208ENST00000507009 H3BPC8 53 aa2.04□□□□□ -2.08
GYPB-208ENST00000507009 LCE3EQ5T5B0 92 aa2.04□□□□□ -2.08
GYPB-208ENST00000507009 FAM240AA0A1B0GVK7 77 aa2.03□□□□□ -2.08
GYPB-208ENST00000507009 LINC00643Q86TS7 51 aa2.03□□□□□ -2.08
GYPB-208ENST00000507009 LOC105371267A0A1B0GV96 52 aa2.02□□□□□ -2.09
GYPB-208ENST00000507009 SCGB1A1P11684 91 aa2.02□□□□□ -2.09
GYPB-208ENST00000507009 MT1LQ93083 61 aa2.02□□□□□ -2.09
GYPB-208ENST00000507009 SPINT4Q6UDR6 99 aa2□□□□□ -2.09
GYPB-208ENST00000507009 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
GYPB-208ENST00000507009 A8MU10 97 aa1.98□□□□□ -2.09
GYPB-208ENST00000507009 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
GYPB-208ENST00000507009 C10orf95Q9H7T3 257 aa1.96□□□□□ -2.1
GYPB-208ENST00000507009 SPATA8Q6RVD6 105 aa1.95□□□□□ -2.1
GYPB-208ENST00000507009 V9GYY9 64 aa1.93□□□□□ -2.1
GYPB-208ENST00000507009 PSPHP1O15172 72 aa1.92□□□□□ -2.1
GYPB-208ENST00000507009 KRTAP12-1P59990 96 aa1.91□□□□□ -2.1
GYPB-208ENST00000507009 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
GYPB-208ENST00000507009 SNURFQ9Y675 71 aa1.91□□□□□ -2.1
GYPB-208ENST00000507009 SERP1Q9Y6X1 66 aa1.91□□□□□ -2.1
GYPB-208ENST00000507009 A0A1B0GU33 70 aa1.88□□□□□ -2.11
GYPB-208ENST00000507009 TNP1P09430 55 aa1.88□□□□□ -2.11
GYPB-208ENST00000507009 SMIM26A0A096LP01 95 aa1.87□□□□□ -2.11
GYPB-208ENST00000507009 KRTAP5-5Q701N2 237 aaPredicted RBP1.87□□□□□ -2.11
GYPB-208ENST00000507009 COA5Q86WW8 74 aa1.86□□□□□ -2.11
GYPB-208ENST00000507009 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
GYPB-208ENST00000507009 KRTAP12-3P60328 96 aa1.85□□□□□ -2.11
GYPB-208ENST00000507009 SMIM20Q8N5G0 67 aa1.85□□□□□ -2.11
GYPB-208ENST00000507009 J3QR89 54 aa1.84□□□□□ -2.11
GYPB-208ENST00000507009 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
GYPB-208ENST00000507009 PRO0628Q9UI54 55 aa1.83□□□□□ -2.12
GYPB-208ENST00000507009 MUC5ACP98088 5654 aa1.83□□□□□ -2.12
GYPB-208ENST00000507009 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
GYPB-208ENST00000507009 A0A1B0GV90 55 aa1.82□□□□□ -2.12
GYPB-208ENST00000507009 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
GYPB-208ENST00000507009 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
GYPB-208ENST00000507009 LCE1CQ5T751 118 aa1.79□□□□□ -2.12
GYPB-208ENST00000507009 LCE1BQ5T7P3 118 aa1.79□□□□□ -2.12
GYPB-208ENST00000507009 SERP2Q8N6R1 65 aa1.79□□□□□ -2.12
GYPB-208ENST00000507009 A0A1B0GU69 56 aa1.78□□□□□ -2.12
GYPB-208ENST00000507009 LUZP6Q538Z0 58 aa1.76□□□□□ -2.13
GYPB-208ENST00000507009 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
GYPB-208ENST00000507009 MT1AP04731 61 aa1.71□□□□□ -2.14
GYPB-208ENST00000507009 KRTAP25-1Q3LHN0 102 aa1.7□□□□□ -2.14
GYPB-208ENST00000507009 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
GYPB-208ENST00000507009 ANAPC13Q9BS18 74 aa1.69□□□□□ -2.14
GYPB-208ENST00000507009 K7ERU9 68 aa1.68□□□□□ -2.14
GYPB-208ENST00000507009 K7ERS5 55 aa1.67□□□□□ -2.14
GYPB-208ENST00000507009 PRR15LQ9BU68 103 aa1.66□□□□□ -2.14
GYPB-208ENST00000507009 H7BZZ5 65 aa1.65□□□□□ -2.15
GYPB-208ENST00000507009 COX7CP15954 63 aa1.63□□□□□ -2.15
GYPB-208ENST00000507009 LCE3DQ9BYE3 92 aa1.59□□□□□ -2.15
GYPB-208ENST00000507009 UQCR11O14957 56 aa1.58□□□□□ -2.16
GYPB-208ENST00000507009 LINC01558Q9Y6Z2 57 aa1.56□□□□□ -2.16
GYPB-208ENST00000507009 A6NED7 52 aa1.55□□□□□ -2.16
GYPB-208ENST00000507009 MIR22HGQ0VDD5 57 aa1.55□□□□□ -2.16
GYPB-208ENST00000507009 RPS28P62857 69 aaKnown RBP1.51□□□□□ -2.17
GYPB-208ENST00000507009 CCDC179H3BU77 68 aa1.48□□□□□ -2.17
GYPB-208ENST00000507009 ATP5EP56381 51 aaPredicted RBP1.47□□□□□ -2.17
GYPB-208ENST00000507009 PMAIP1Q13794 54 aa1.47□□□□□ -2.17
GYPB-208ENST00000507009 MUC19Q7Z5P9 8384 aa1.45□□□□□ -2.18
GYPB-208ENST00000507009 CDC42SE1Q9NRR8 79 aa1.44□□□□□ -2.18
GYPB-208ENST00000507009 Q1T7F1 81 aa1.41□□□□□ -2.18
GYPB-208ENST00000507009 ROMO1P60602 79 aa1.4□□□□□ -2.19
GYPB-208ENST00000507009 TMEM258P61165 79 aa1.37□□□□□ -2.19
GYPB-208ENST00000507009 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
GYPB-208ENST00000507009 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
GYPB-208ENST00000507009 KTN1-AS1Q86SY8 53 aa1.28□□□□□ -2.2
GYPB-208ENST00000507009 INE1O15225 51 aa1.06□□□□□ -2.24
GYPB-208ENST00000507009 BRK1Q8WUW1 75 aa0.96□□□□□ -2.26
GYPB-208ENST00000507009 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
GYPB-208ENST00000507009 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
GYPB-208ENST00000507009 PRM1P04553 51 aa0.73□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 19.6 ms