RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 MUC2Q02817 5179 aa1.65□□□□□ -2.15
AFP-203ENST00000506820 CRIPTQ9P021 101 aa1.65□□□□□ -2.15
AFP-203ENST00000506820 PRO2289Q9P1D8 64 aa1.65□□□□□ -2.15
AFP-203ENST00000506820 R4GN34 69 aa1.65□□□□□ -2.15
AFP-203ENST00000506820 RNF213Q63HN8 5207 aa1.63□□□□□ -2.15
AFP-203ENST00000506820 MUC17Q685J3 4493 aa1.63□□□□□ -2.15
AFP-203ENST00000506820 MT1HP80294 61 aa1.61□□□□□ -2.15
AFP-203ENST00000506820 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
AFP-203ENST00000506820 COX6B2Q6YFQ2 88 aa1.58□□□□□ -2.16
AFP-203ENST00000506820 H0YAA0 97 aa1.57□□□□□ -2.16
AFP-203ENST00000506820 INE1O15225 51 aa1.57□□□□□ -2.16
AFP-203ENST00000506820 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
AFP-203ENST00000506820 H1FX-AS1Q4G0G2 97 aa1.56□□□□□ -2.16
AFP-203ENST00000506820 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
AFP-203ENST00000506820 M0R2T5 61 aa1.54□□□□□ -2.16
AFP-203ENST00000506820 FLGP20930 4061 aaPredicted RBP1.53□□□□□ -2.16
AFP-203ENST00000506820 MT2AP02795 61 aa1.53□□□□□ -2.16
AFP-203ENST00000506820 MT1FP04733 61 aa1.53□□□□□ -2.16
AFP-203ENST00000506820 KRTAP12-4P60329 112 aa1.53□□□□□ -2.16
AFP-203ENST00000506820 C10orf95Q9H7T3 257 aa1.52□□□□□ -2.17
AFP-203ENST00000506820 S4R3F8 94 aa1.52□□□□□ -2.17
AFP-203ENST00000506820 KRTAP12-3P60328 96 aa1.49□□□□□ -2.17
AFP-203ENST00000506820 SPRR2GQ9BYE4 73 aa1.44□□□□□ -2.18
AFP-203ENST00000506820 MT1BP07438 61 aa1.43□□□□□ -2.18
AFP-203ENST00000506820 A0A0D9SG42 100 aa1.42□□□□□ -2.18
AFP-203ENST00000506820 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
AFP-203ENST00000506820 KRTAP13-4Q3LI77 160 aa1.42□□□□□ -2.18
AFP-203ENST00000506820 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
AFP-203ENST00000506820 FSIP2Q5CZC0 6907 aa1.41□□□□□ -2.18
AFP-203ENST00000506820 USH2AO75445 5202 aa1.4□□□□□ -2.19
AFP-203ENST00000506820 M0QZ58 72 aa1.39□□□□□ -2.19
AFP-203ENST00000506820 KRTAP19-6Q3LI70 58 aa1.38□□□□□ -2.19
AFP-203ENST00000506820 MT1XP80297 61 aa1.36□□□□□ -2.19
AFP-203ENST00000506820 FCGBPQ9Y6R7 5405 aaPredicted RBP1.34□□□□□ -2.19
AFP-203ENST00000506820 KRTAP12-1P59990 96 aa1.34□□□□□ -2.19
AFP-203ENST00000506820 SSPOA2VEC9 5147 aa1.33□□□□□ -2.2
AFP-203ENST00000506820 KRTAP6-3Q3LI67 103 aa1.26□□□□□ -2.21
AFP-203ENST00000506820 SYNE2Q8WXH0 6885 aaKnown RBP1.25□□□□□ -2.21
AFP-203ENST00000506820 KRTAP8-1Q8IUC2 63 aa1.23□□□□□ -2.21
AFP-203ENST00000506820 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
AFP-203ENST00000506820 KRTAP19-7Q3SYF9 63 aa1.22□□□□□ -2.21
AFP-203ENST00000506820 KMT2DO14686 5537 aa1.21□□□□□ -2.22
AFP-203ENST00000506820 SPRR2FQ96RM1 72 aa1.21□□□□□ -2.22
AFP-203ENST00000506820 TNP1P09430 55 aa1.2□□□□□ -2.22
AFP-203ENST00000506820 KRTAP19-5Q3LI72 72 aa1.2□□□□□ -2.22
AFP-203ENST00000506820 MT1EP04732 61 aa1.19□□□□□ -2.22
AFP-203ENST00000506820 NEBP20929 6669 aa1.18□□□□□ -2.22
AFP-203ENST00000506820 SPRR2EP22531 72 aa1.17□□□□□ -2.22
AFP-203ENST00000506820 SPRR2BP35325 72 aa1.17□□□□□ -2.22
AFP-203ENST00000506820 SPRR2AP35326 72 aa1.17□□□□□ -2.22
AFP-203ENST00000506820 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.23
AFP-203ENST00000506820 MT1LQ93083 61 aa1.15□□□□□ -2.23
AFP-203ENST00000506820 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.23
AFP-203ENST00000506820 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
AFP-203ENST00000506820 MT1MQ8N339 61 aa1.13□□□□□ -2.23
AFP-203ENST00000506820 SPRR2DP22532 72 aa1.12□□□□□ -2.23
AFP-203ENST00000506820 MT1GP13640 62 aa1.11□□□□□ -2.23
AFP-203ENST00000506820 KRTAP20-1Q3LI63 56 aa1.1□□□□□ -2.23
AFP-203ENST00000506820 KRTAP2-3P0C7H8 128 aa1.09□□□□□ -2.23
AFP-203ENST00000506820 KRTAP2-4Q9BYR9 128 aa1.09□□□□□ -2.23
AFP-203ENST00000506820 KRTAP2-1Q9BYU5 128 aa1.05□□□□□ -2.24
AFP-203ENST00000506820 AHNAK2Q8IVF2 5795 aa1.03□□□□□ -2.24
AFP-203ENST00000506820 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
AFP-203ENST00000506820 MT4P47944 62 aa0.99□□□□□ -2.25
AFP-203ENST00000506820 KRTAP6-1Q3LI64 71 aa0.98□□□□□ -2.25
AFP-203ENST00000506820 MT1AP04731 61 aa0.97□□□□□ -2.25
AFP-203ENST00000506820 KRTAP20-2Q3LI61 65 aa0.95□□□□□ -2.26
AFP-203ENST00000506820 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
AFP-203ENST00000506820 PRM1P04553 51 aa0.89□□□□□ -2.27
AFP-203ENST00000506820 KRTAP5-10Q6L8G5 202 aa0.88□□□□□ -2.27
AFP-203ENST00000506820 GPR98Q8WXG9 6306 aa0.87□□□□□ -2.27
AFP-203ENST00000506820 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
AFP-203ENST00000506820 MUC5BQ9HC84 5762 aaPredicted RBP0.8□□□□□ -2.28
AFP-203ENST00000506820 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
AFP-203ENST00000506820 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
AFP-203ENST00000506820 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
AFP-203ENST00000506820 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
AFP-203ENST00000506820 PHGR1C9JFL3 82 aa0.57□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 12.7 ms