RNA–Protein interactions for RNA: ENST00000506707.1

USP46-206, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-206ENST00000506707 SMIM26A0A096LP01 95 aa2.29□□□□□ -2.04
USP46-206ENST00000506707 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
USP46-206ENST00000506707 Q1T7F1 81 aa2.28□□□□□ -2.04
USP46-206ENST00000506707 CAMK2N1Q7Z7J9 78 aa2.28□□□□□ -2.04
USP46-206ENST00000506707 RPS28P62857 69 aaKnown RBP2.27□□□□□ -2.05
USP46-206ENST00000506707 UQCR11O14957 56 aa2.26□□□□□ -2.05
USP46-206ENST00000506707 V9GYY9 64 aa2.26□□□□□ -2.05
USP46-206ENST00000506707 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
USP46-206ENST00000506707 PSPHP1O15172 72 aa2.24□□□□□ -2.05
USP46-206ENST00000506707 KRTAP8-1Q8IUC2 63 aa2.24□□□□□ -2.05
USP46-206ENST00000506707 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
USP46-206ENST00000506707 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
USP46-206ENST00000506707 NEBP20929 6669 aa2.21□□□□□ -2.06
USP46-206ENST00000506707 SPRR2FQ96RM1 72 aa2.21□□□□□ -2.06
USP46-206ENST00000506707 C10orf95Q9H7T3 257 aa2.21□□□□□ -2.06
USP46-206ENST00000506707 LCE1FQ5T754 118 aa2.19□□□□□ -2.06
USP46-206ENST00000506707 A6NED7 52 aa2.16□□□□□ -2.06
USP46-206ENST00000506707 SPRR2EP22531 72 aa2.15□□□□□ -2.07
USP46-206ENST00000506707 SPRR2BP35325 72 aa2.15□□□□□ -2.07
USP46-206ENST00000506707 SPRR2AP35326 72 aa2.15□□□□□ -2.07
USP46-206ENST00000506707 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
USP46-206ENST00000506707 LCE3AQ5TA76 89 aa2.15□□□□□ -2.07
USP46-206ENST00000506707 TNP1P09430 55 aa2.14□□□□□ -2.07
USP46-206ENST00000506707 K7ERS5 55 aa2.13□□□□□ -2.07
USP46-206ENST00000506707 MT1EP04732 61 aa2.11□□□□□ -2.07
USP46-206ENST00000506707 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
USP46-206ENST00000506707 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
USP46-206ENST00000506707 CDC42SE1Q9NRR8 79 aa2.09□□□□□ -2.07
USP46-206ENST00000506707 KRTAP2-3P0C7H8 128 aa2.08□□□□□ -2.08
USP46-206ENST00000506707 KRTAP25-1Q3LHN0 102 aa2.08□□□□□ -2.08
USP46-206ENST00000506707 KRTAP20-1Q3LI63 56 aa2.08□□□□□ -2.08
USP46-206ENST00000506707 KRTAP2-4Q9BYR9 128 aa2.08□□□□□ -2.08
USP46-206ENST00000506707 SPRR2DP22532 72 aa2.07□□□□□ -2.08
USP46-206ENST00000506707 KRTAP19-3Q7Z4W3 81 aa2.07□□□□□ -2.08
USP46-206ENST00000506707 DSTQ03001 7570 aaKnown RBP2.05□□□□□ -2.08
USP46-206ENST00000506707 MT1GP13640 62 aa2.04□□□□□ -2.08
USP46-206ENST00000506707 MT1LQ93083 61 aa2.04□□□□□ -2.08
USP46-206ENST00000506707 KRTAP12-3P60328 96 aa2.03□□□□□ -2.08
USP46-206ENST00000506707 ROMO1P60602 79 aa2.03□□□□□ -2.08
USP46-206ENST00000506707 KRTAP2-1Q9BYU5 128 aa2.02□□□□□ -2.09
USP46-206ENST00000506707 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
USP46-206ENST00000506707 MT1MQ8N339 61 aa2□□□□□ -2.09
USP46-206ENST00000506707 PRAC1Q96KF2 57 aa2□□□□□ -2.09
USP46-206ENST00000506707 PRO0628Q9UI54 55 aa2□□□□□ -2.09
USP46-206ENST00000506707 PP632Q6XCG6 107 aa1.99□□□□□ -2.09
USP46-206ENST00000506707 KRTAP5-5Q701N2 237 aaPredicted RBP1.98□□□□□ -2.09
USP46-206ENST00000506707 BRK1Q8WUW1 75 aa1.97□□□□□ -2.09
USP46-206ENST00000506707 NDUFAF8A1L188 74 aa1.96□□□□□ -2.1
USP46-206ENST00000506707 PMAIP1Q13794 54 aa1.93□□□□□ -2.1
USP46-206ENST00000506707 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
USP46-206ENST00000506707 LCE1BQ5T7P3 118 aa1.92□□□□□ -2.1
USP46-206ENST00000506707 LCE3EQ5T5B0 92 aa1.9□□□□□ -2.11
USP46-206ENST00000506707 MT4P47944 62 aa1.81□□□□□ -2.12
USP46-206ENST00000506707 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
USP46-206ENST00000506707 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
USP46-206ENST00000506707 KTN1-AS1Q86SY8 53 aa1.78□□□□□ -2.12
USP46-206ENST00000506707 LUZP6Q538Z0 58 aa1.75□□□□□ -2.13
USP46-206ENST00000506707 KRTAP12-4P60329 112 aa1.74□□□□□ -2.13
USP46-206ENST00000506707 SPRR5A0A1B0GTR4 108 aa1.73□□□□□ -2.13
USP46-206ENST00000506707 MT1AP04731 61 aa1.73□□□□□ -2.13
USP46-206ENST00000506707 KRTAP20-2Q3LI61 65 aa1.73□□□□□ -2.13
USP46-206ENST00000506707 KRTAP6-1Q3LI64 71 aa1.72□□□□□ -2.13
USP46-206ENST00000506707 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
USP46-206ENST00000506707 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
USP46-206ENST00000506707 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
USP46-206ENST00000506707 KRTAP6-2Q3LI66 62 aa1.62□□□□□ -2.15
USP46-206ENST00000506707 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
USP46-206ENST00000506707 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
USP46-206ENST00000506707 LCE3DQ9BYE3 92 aa1.48□□□□□ -2.17
USP46-206ENST00000506707 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
USP46-206ENST00000506707 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
USP46-206ENST00000506707 MUC5BQ9HC84 5762 aaPredicted RBP1.36□□□□□ -2.19
USP46-206ENST00000506707 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
USP46-206ENST00000506707 INE1O15225 51 aa1.29□□□□□ -2.2
USP46-206ENST00000506707 PRM1P04553 51 aa1.05□□□□□ -2.24
USP46-206ENST00000506707 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
USP46-206ENST00000506707 KRTAP21-1Q3LI58 79 aa0.71□□□□□ -2.3
USP46-206ENST00000506707 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 9.3 ms