RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
GYPB-206ENST00000506516 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
GYPB-206ENST00000506516 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
GYPB-206ENST00000506516 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
GYPB-206ENST00000506516 NEBP20929 6669 aa2.86□□□□□ -1.95
GYPB-206ENST00000506516 A8MU10 97 aa2.86□□□□□ -1.95
GYPB-206ENST00000506516 UQCR11O14957 56 aa2.86□□□□□ -1.95
GYPB-206ENST00000506516 SPRR2EP22531 72 aa2.81□□□□□ -1.96
GYPB-206ENST00000506516 SPRR2BP35325 72 aa2.81□□□□□ -1.96
GYPB-206ENST00000506516 SPRR2AP35326 72 aa2.81□□□□□ -1.96
GYPB-206ENST00000506516 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
GYPB-206ENST00000506516 Q1T7F1 81 aa2.8□□□□□ -1.96
GYPB-206ENST00000506516 KRTAP5-1Q6L8H4 278 aa2.8□□□□□ -1.96
GYPB-206ENST00000506516 MIR22HGQ0VDD5 57 aa2.79□□□□□ -1.96
GYPB-206ENST00000506516 PSPHP1O15172 72 aa2.77□□□□□ -1.97
GYPB-206ENST00000506516 TNP1P09430 55 aa2.77□□□□□ -1.97
GYPB-206ENST00000506516 K7ERS5 55 aa2.76□□□□□ -1.97
GYPB-206ENST00000506516 RPS28P62857 69 aaKnown RBP2.76□□□□□ -1.97
GYPB-206ENST00000506516 KRTAP20-1Q3LI63 56 aa2.76□□□□□ -1.97
GYPB-206ENST00000506516 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
GYPB-206ENST00000506516 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
GYPB-206ENST00000506516 C10orf95Q9H7T3 257 aa2.74□□□□□ -1.97
GYPB-206ENST00000506516 SPRR2DP22532 72 aa2.72□□□□□ -1.97
GYPB-206ENST00000506516 A6NED7 52 aa2.71□□□□□ -1.98
GYPB-206ENST00000506516 KRTAP19-7Q3SYF9 63 aa2.7□□□□□ -1.98
GYPB-206ENST00000506516 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
GYPB-206ENST00000506516 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
GYPB-206ENST00000506516 KRTAP4-4Q9BYR3 166 aa2.69□□□□□ -1.98
GYPB-206ENST00000506516 MT1EP04732 61 aa2.68□□□□□ -1.98
GYPB-206ENST00000506516 PRO0628Q9UI54 55 aa2.68□□□□□ -1.98
GYPB-206ENST00000506516 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
GYPB-206ENST00000506516 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
GYPB-206ENST00000506516 KRTAP2-1Q9BYU5 128 aa2.66□□□□□ -1.98
GYPB-206ENST00000506516 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
GYPB-206ENST00000506516 KRTAP19-3Q7Z4W3 81 aa2.65□□□□□ -1.99
GYPB-206ENST00000506516 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
GYPB-206ENST00000506516 MT1GP13640 62 aa2.62□□□□□ -1.99
GYPB-206ENST00000506516 PP632Q6XCG6 107 aa2.62□□□□□ -1.99
GYPB-206ENST00000506516 CDC42SE1Q9NRR8 79 aa2.59□□□□□ -1.99
GYPB-206ENST00000506516 KRTAP12-3P60328 96 aa2.58□□□□□ -2
GYPB-206ENST00000506516 MT1LQ93083 61 aa2.58□□□□□ -2
GYPB-206ENST00000506516 ROMO1P60602 79 aa2.55□□□□□ -2
GYPB-206ENST00000506516 LUZP6Q538Z0 58 aa2.55□□□□□ -2
GYPB-206ENST00000506516 MT1MQ8N339 61 aa2.55□□□□□ -2
GYPB-206ENST00000506516 KRTAP4-3Q9BYR4 195 aa2.46□□□□□ -2.02
GYPB-206ENST00000506516 BRK1Q8WUW1 75 aa2.43□□□□□ -2.02
GYPB-206ENST00000506516 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
GYPB-206ENST00000506516 PMAIP1Q13794 54 aa2.41□□□□□ -2.02
GYPB-206ENST00000506516 MT4P47944 62 aa2.37□□□□□ -2.03
GYPB-206ENST00000506516 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
GYPB-206ENST00000506516 KRTAP5-5Q701N2 237 aaPredicted RBP2.31□□□□□ -2.04
GYPB-206ENST00000506516 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
GYPB-206ENST00000506516 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
GYPB-206ENST00000506516 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
GYPB-206ENST00000506516 SPRR5A0A1B0GTR4 108 aa2.25□□□□□ -2.05
GYPB-206ENST00000506516 SYNE1Q8NF91 8797 aaKnown RBP2.24□□□□□ -2.05
GYPB-206ENST00000506516 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
GYPB-206ENST00000506516 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
GYPB-206ENST00000506516 MT1AP04731 61 aa2.2□□□□□ -2.06
GYPB-206ENST00000506516 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
GYPB-206ENST00000506516 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
GYPB-206ENST00000506516 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
GYPB-206ENST00000506516 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
GYPB-206ENST00000506516 LCE1CQ5T751 118 aa2.09□□□□□ -2.07
GYPB-206ENST00000506516 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.07
GYPB-206ENST00000506516 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
GYPB-206ENST00000506516 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
GYPB-206ENST00000506516 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
GYPB-206ENST00000506516 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
GYPB-206ENST00000506516 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
GYPB-206ENST00000506516 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
GYPB-206ENST00000506516 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
GYPB-206ENST00000506516 INE1O15225 51 aa1.64□□□□□ -2.15
GYPB-206ENST00000506516 KRTAP21-2Q3LI59 83 aa1.49□□□□□ -2.17
GYPB-206ENST00000506516 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
GYPB-206ENST00000506516 PRM1P04553 51 aa1.3□□□□□ -2.2
GYPB-206ENST00000506516 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
GYPB-206ENST00000506516 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 145 ms