RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 DSTQ03001 7570 aaKnown RBP5.54□□□□□ -1.52
MED28-204ENST00000506409 V9GYY9 64 aa5.51□□□□□ -1.53
MED28-204ENST00000506409 MT1MQ8N339 61 aa5.5□□□□□ -1.53
MED28-204ENST00000506409 PSPHP1O15172 72 aa5.48□□□□□ -1.53
MED28-204ENST00000506409 Q1T7F1 81 aa5.46□□□□□ -1.54
MED28-204ENST00000506409 K7ERS5 55 aa5.45□□□□□ -1.54
MED28-204ENST00000506409 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
MED28-204ENST00000506409 KRTAP25-1Q3LHN0 102 aa5.39□□□□□ -1.55
MED28-204ENST00000506409 KRTAP4-9Q9BYQ8 210 aa5.38□□□□□ -1.55
MED28-204ENST00000506409 KRTAP4-3Q9BYR4 195 aa5.36□□□□□ -1.55
MED28-204ENST00000506409 A6NED7 52 aa5.31□□□□□ -1.56
MED28-204ENST00000506409 LCE4AQ5TA78 99 aa5.28□□□□□ -1.56
MED28-204ENST00000506409 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
MED28-204ENST00000506409 KRTAP4-7Q9BYR0 210 aa5.27□□□□□ -1.57
MED28-204ENST00000506409 MT4P47944 62 aa5.23□□□□□ -1.57
MED28-204ENST00000506409 RPS28P62857 69 aaKnown RBP5.22□□□□□ -1.57
MED28-204ENST00000506409 PCP4P48539 62 aa5.2□□□□□ -1.58
MED28-204ENST00000506409 KRTAP5-4Q6L8H1 288 aa5.19□□□□□ -1.58
MED28-204ENST00000506409 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
MED28-204ENST00000506409 CDC42SE1Q9NRR8 79 aa5.17□□□□□ -1.58
MED28-204ENST00000506409 GPR98Q8WXG9 6306 aa5.14□□□□□ -1.59
MED28-204ENST00000506409 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
MED28-204ENST00000506409 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
MED28-204ENST00000506409 KRTAP15-1Q3LI76 137 aa5.08□□□□□ -1.6
MED28-204ENST00000506409 ROMO1P60602 79 aa5.07□□□□□ -1.6
MED28-204ENST00000506409 KRTAP4-12Q9BQ66 201 aa5.04□□□□□ -1.6
MED28-204ENST00000506409 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
MED28-204ENST00000506409 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
MED28-204ENST00000506409 AHNAK2Q8IVF2 5795 aa4.91□□□□□ -1.62
MED28-204ENST00000506409 KRTAP9-9Q9BYP9 154 aa4.91□□□□□ -1.62
MED28-204ENST00000506409 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
MED28-204ENST00000506409 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
MED28-204ENST00000506409 KRTAP20-2Q3LI61 65 aa4.9□□□□□ -1.63
MED28-204ENST00000506409 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
MED28-204ENST00000506409 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
MED28-204ENST00000506409 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
MED28-204ENST00000506409 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
MED28-204ENST00000506409 MT1AP04731 61 aa4.71□□□□□ -1.66
MED28-204ENST00000506409 KRTAP9-6A8MVA2 160 aa4.69□□□□□ -1.66
MED28-204ENST00000506409 KRTAP6-1Q3LI64 71 aa4.68□□□□□ -1.66
MED28-204ENST00000506409 KRTAP5-7Q6L8G8 165 aa4.65□□□□□ -1.67
MED28-204ENST00000506409 BRK1Q8WUW1 75 aa4.61□□□□□ -1.67
MED28-204ENST00000506409 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
MED28-204ENST00000506409 H3BS24 57 aa4.49□□□□□ -1.69
MED28-204ENST00000506409 KRTAP6-2Q3LI66 62 aa4.46□□□□□ -1.7
MED28-204ENST00000506409 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.7
MED28-204ENST00000506409 KRTAP4-2Q9BYR5 136 aa4.45□□□□□ -1.7
MED28-204ENST00000506409 PMAIP1Q13794 54 aa4.33□□□□□ -1.72
MED28-204ENST00000506409 MT3P25713 68 aa4.31□□□□□ -1.72
MED28-204ENST00000506409 KRTAP5-8O75690 187 aa4.3□□□□□ -1.72
MED28-204ENST00000506409 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
MED28-204ENST00000506409 OBSCNQ5VST9 7968 aa4.24□□□□□ -1.73
MED28-204ENST00000506409 PRAC1Q96KF2 57 aa4.17□□□□□ -1.74
MED28-204ENST00000506409 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
MED28-204ENST00000506409 PRO0628Q9UI54 55 aa4.03□□□□□ -1.76
MED28-204ENST00000506409 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
MED28-204ENST00000506409 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
MED28-204ENST00000506409 AHNAKQ09666 5890 aaKnown RBP4□□□□□ -1.77
MED28-204ENST00000506409 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
MED28-204ENST00000506409 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
MED28-204ENST00000506409 LCE1BQ5T7P3 118 aa3.72□□□□□ -1.81
MED28-204ENST00000506409 LCE1CQ5T751 118 aa3.65□□□□□ -1.83
MED28-204ENST00000506409 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
MED28-204ENST00000506409 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
MED28-204ENST00000506409 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
MED28-204ENST00000506409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
MED28-204ENST00000506409 KRTAP5-11Q6L8G4 156 aa3.31□□□□□ -1.88
MED28-204ENST00000506409 LCE1FQ5T754 118 aa3.2□□□□□ -1.9
MED28-204ENST00000506409 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
MED28-204ENST00000506409 PHGR1C9JFL3 82 aa2.85□□□□□ -1.95
MED28-204ENST00000506409 NDUFAF8A1L188 74 aa2.84□□□□□ -1.95
MED28-204ENST00000506409 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
MED28-204ENST00000506409 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
MED28-204ENST00000506409 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
MED28-204ENST00000506409 PRM1P04553 51 aa2.6□□□□□ -1.99
MED28-204ENST00000506409 INE1O15225 51 aa2.5□□□□□ -2.01
MED28-204ENST00000506409 KRTAP21-1Q3LI58 79 aa2.15□□□□□ -2.07
MED28-204ENST00000506409 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 45 ms