RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
TNPO1-204ENST00000506351 KRTAP4-7Q9BYR0 210 aa2.53□□□□□ -2
TNPO1-204ENST00000506351 KRTAP9-6A8MVA2 160 aa2.51□□□□□ -2.01
TNPO1-204ENST00000506351 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.5□□□□□ -2.01
TNPO1-204ENST00000506351 KRTAP19-3Q7Z4W3 81 aa2.47□□□□□ -2.01
TNPO1-204ENST00000506351 MT1MQ8N339 61 aa2.45□□□□□ -2.02
TNPO1-204ENST00000506351 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
TNPO1-204ENST00000506351 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
TNPO1-204ENST00000506351 MT1GP13640 62 aa2.44□□□□□ -2.02
TNPO1-204ENST00000506351 SYNE2Q8WXH0 6885 aaKnown RBP2.43□□□□□ -2.02
TNPO1-204ENST00000506351 KRTAP4-3Q9BYR4 195 aa2.43□□□□□ -2.02
TNPO1-204ENST00000506351 MUC12Q9UKN1 5478 aa2.42□□□□□ -2.02
TNPO1-204ENST00000506351 LCE3BQ5TA77 95 aa2.41□□□□□ -2.02
TNPO1-204ENST00000506351 LCE5AQ5TCM9 118 aa2.41□□□□□ -2.02
TNPO1-204ENST00000506351 KRTAP4-12Q9BQ66 201 aa2.38□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP2-3P0C7H8 128 aa2.37□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP2-1Q9BYU5 128 aa2.37□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP9-4Q9BYQ2 154 aa2.36□□□□□ -2.03
TNPO1-204ENST00000506351 KRTAP9-7A8MTY7 169 aa2.32□□□□□ -2.04
TNPO1-204ENST00000506351 LCE1AQ5T7P2 110 aa2.32□□□□□ -2.04
TNPO1-204ENST00000506351 INE1O15225 51 aa2.31□□□□□ -2.04
TNPO1-204ENST00000506351 SPRR2EP22531 72 aa2.28□□□□□ -2.04
TNPO1-204ENST00000506351 SPRR2BP35325 72 aa2.28□□□□□ -2.04
TNPO1-204ENST00000506351 SPRR2AP35326 72 aa2.28□□□□□ -2.04
TNPO1-204ENST00000506351 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
TNPO1-204ENST00000506351 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
TNPO1-204ENST00000506351 LCE1DQ5T752 114 aa2.23□□□□□ -2.05
TNPO1-204ENST00000506351 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
TNPO1-204ENST00000506351 NEBP20929 6669 aa2.21□□□□□ -2.06
TNPO1-204ENST00000506351 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
TNPO1-204ENST00000506351 SPRR2DP22532 72 aa2.2□□□□□ -2.06
TNPO1-204ENST00000506351 KRTAP5-5Q701N2 237 aaPredicted RBP2.2□□□□□ -2.06
TNPO1-204ENST00000506351 MT1AP04731 61 aa2.19□□□□□ -2.06
TNPO1-204ENST00000506351 KRTAP6-1Q3LI64 71 aa2.18□□□□□ -2.06
TNPO1-204ENST00000506351 KRTAP4-9Q9BYQ8 210 aa2.16□□□□□ -2.06
TNPO1-204ENST00000506351 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.07
TNPO1-204ENST00000506351 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.08
TNPO1-204ENST00000506351 KRTAP12-4P60329 112 aa2.03□□□□□ -2.08
TNPO1-204ENST00000506351 KRTAP20-1Q3LI63 56 aa2.03□□□□□ -2.08
TNPO1-204ENST00000506351 SYNE1Q8NF91 8797 aaKnown RBP2.02□□□□□ -2.09
TNPO1-204ENST00000506351 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
TNPO1-204ENST00000506351 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
TNPO1-204ENST00000506351 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
TNPO1-204ENST00000506351 KRTAP6-2Q3LI66 62 aa1.97□□□□□ -2.09
TNPO1-204ENST00000506351 MT3P25713 68 aa1.96□□□□□ -2.1
TNPO1-204ENST00000506351 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
TNPO1-204ENST00000506351 KRTAP2-2Q9BYT5 123 aa1.92□□□□□ -2.1
TNPO1-204ENST00000506351 MT4P47944 62 aa1.91□□□□□ -2.1
TNPO1-204ENST00000506351 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
TNPO1-204ENST00000506351 GPR98Q8WXG9 6306 aa1.86□□□□□ -2.11
TNPO1-204ENST00000506351 KRTAP5-2Q701N4 177 aa1.86□□□□□ -2.11
TNPO1-204ENST00000506351 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
TNPO1-204ENST00000506351 PRM1P04553 51 aa1.79□□□□□ -2.12
TNPO1-204ENST00000506351 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
TNPO1-204ENST00000506351 OBSCNQ5VST9 7968 aa1.75□□□□□ -2.13
TNPO1-204ENST00000506351 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
TNPO1-204ENST00000506351 AHNAK2Q8IVF2 5795 aa1.68□□□□□ -2.14
TNPO1-204ENST00000506351 LCE1EQ5T753 118 aa1.65□□□□□ -2.14
TNPO1-204ENST00000506351 MUC5ACP98088 5654 aa1.61□□□□□ -2.15
TNPO1-204ENST00000506351 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
TNPO1-204ENST00000506351 KRTAP5-1Q6L8H4 278 aa1.58□□□□□ -2.16
TNPO1-204ENST00000506351 LCE1BQ5T7P3 118 aa1.58□□□□□ -2.16
TNPO1-204ENST00000506351 LCE1CQ5T751 118 aa1.55□□□□□ -2.16
TNPO1-204ENST00000506351 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
TNPO1-204ENST00000506351 AHNAKQ09666 5890 aaKnown RBP1.51□□□□□ -2.17
TNPO1-204ENST00000506351 KRTAP5-7Q6L8G8 165 aa1.51□□□□□ -2.17
TNPO1-204ENST00000506351 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.47□□□□□ -2.17
TNPO1-204ENST00000506351 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
TNPO1-204ENST00000506351 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
TNPO1-204ENST00000506351 KRTAP4-4Q9BYR3 166 aa1.26□□□□□ -2.21
TNPO1-204ENST00000506351 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
TNPO1-204ENST00000506351 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
TNPO1-204ENST00000506351 MUC19Q7Z5P9 8384 aa1.01□□□□□ -2.25
TNPO1-204ENST00000506351 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 70.6 ms