RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 Q1T7F1 81 aa7.88□□□□□ -1.15
HMGB2-204ENST00000506267 V9GYY9 64 aa7.86□□□□□ -1.15
HMGB2-204ENST00000506267 PSPHP1O15172 72 aa7.85□□□□□ -1.15
HMGB2-204ENST00000506267 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
HMGB2-204ENST00000506267 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
HMGB2-204ENST00000506267 KRTAP4-9Q9BYQ8 210 aa7.79□□□□□ -1.16
HMGB2-204ENST00000506267 KRTAP25-1Q3LHN0 102 aa7.75□□□□□ -1.17
HMGB2-204ENST00000506267 K7ERS5 55 aa7.71□□□□□ -1.18
HMGB2-204ENST00000506267 GPR98Q8WXG9 6306 aa7.7□□□□□ -1.18
HMGB2-204ENST00000506267 KRTAP4-7Q9BYR0 210 aa7.67□□□□□ -1.18
HMGB2-204ENST00000506267 LCE1DQ5T752 114 aa7.64□□□□□ -1.19
HMGB2-204ENST00000506267 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
HMGB2-204ENST00000506267 KRTAP5-4Q6L8H1 288 aa7.58□□□□□ -1.2
HMGB2-204ENST00000506267 A6NED7 52 aa7.56□□□□□ -1.2
HMGB2-204ENST00000506267 HMCN1Q96RW7 5635 aa7.56□□□□□ -1.2
HMGB2-204ENST00000506267 MT4P47944 62 aa7.53□□□□□ -1.2
HMGB2-204ENST00000506267 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
HMGB2-204ENST00000506267 KRTAP23-1A1A580 65 aa7.49□□□□□ -1.21
HMGB2-204ENST00000506267 PCP4P48539 62 aa7.46□□□□□ -1.22
HMGB2-204ENST00000506267 KRTAP4-6Q9BYQ5 205 aa7.38□□□□□ -1.23
HMGB2-204ENST00000506267 KRTAP19-4Q3LI73 84 aa7.36□□□□□ -1.23
HMGB2-204ENST00000506267 KRTAP5-5Q701N2 237 aaPredicted RBP7.35□□□□□ -1.23
HMGB2-204ENST00000506267 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
HMGB2-204ENST00000506267 KRTAP15-1Q3LI76 137 aa7.32□□□□□ -1.24
HMGB2-204ENST00000506267 ROMO1P60602 79 aa7.27□□□□□ -1.25
HMGB2-204ENST00000506267 AHNAK2Q8IVF2 5795 aa7.26□□□□□ -1.25
HMGB2-204ENST00000506267 LOC100996750A0A140TA64 210 aa7.25□□□□□ -1.25
HMGB2-204ENST00000506267 LCE3CQ5T5A8 94 aa7.21□□□□□ -1.26
HMGB2-204ENST00000506267 KRTAP20-2Q3LI61 65 aa7.12□□□□□ -1.27
HMGB2-204ENST00000506267 SPRR5A0A1B0GTR4 108 aa7.09□□□□□ -1.27
HMGB2-204ENST00000506267 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
HMGB2-204ENST00000506267 KRTAP5-10Q6L8G5 202 aa7.06□□□□□ -1.28
HMGB2-204ENST00000506267 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
HMGB2-204ENST00000506267 KRTAP5-3Q6L8H2 238 aa6.94□□□□□ -1.3
HMGB2-204ENST00000506267 KRTAP9-6A8MVA2 160 aa6.86□□□□□ -1.31
HMGB2-204ENST00000506267 MT1AP04731 61 aa6.83□□□□□ -1.32
HMGB2-204ENST00000506267 KRTAP6-1Q3LI64 71 aa6.8□□□□□ -1.32
HMGB2-204ENST00000506267 KRTAP5-7Q6L8G8 165 aa6.76□□□□□ -1.33
HMGB2-204ENST00000506267 KRTAP5-2Q701N4 177 aa6.67□□□□□ -1.34
HMGB2-204ENST00000506267 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
HMGB2-204ENST00000506267 BRK1Q8WUW1 75 aa6.55□□□□□ -1.36
HMGB2-204ENST00000506267 KRTAP4-11Q9BYQ6 195 aa6.47□□□□□ -1.37
HMGB2-204ENST00000506267 KRTAP6-2Q3LI66 62 aa6.46□□□□□ -1.38
HMGB2-204ENST00000506267 KRTAP5-8O75690 187 aa6.27□□□□□ -1.41
HMGB2-204ENST00000506267 MT3P25713 68 aa6.22□□□□□ -1.41
HMGB2-204ENST00000506267 OBSCNQ5VST9 7968 aa6.19□□□□□ -1.42
HMGB2-204ENST00000506267 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
HMGB2-204ENST00000506267 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
HMGB2-204ENST00000506267 MUC5BQ9HC84 5762 aaPredicted RBP5.96□□□□□ -1.46
HMGB2-204ENST00000506267 KRTAP5-1Q6L8H4 278 aa5.96□□□□□ -1.46
HMGB2-204ENST00000506267 AHNAKQ09666 5890 aaKnown RBP5.93□□□□□ -1.46
HMGB2-204ENST00000506267 MUC5ACP98088 5654 aa5.92□□□□□ -1.46
HMGB2-204ENST00000506267 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
HMGB2-204ENST00000506267 PRO0628Q9UI54 55 aa5.74□□□□□ -1.49
HMGB2-204ENST00000506267 LCE1EQ5T753 118 aa5.71□□□□□ -1.5
HMGB2-204ENST00000506267 KTN1-AS1Q86SY8 53 aa5.49□□□□□ -1.53
HMGB2-204ENST00000506267 KRTAP4-2Q9BYR5 136 aa5.42□□□□□ -1.54
HMGB2-204ENST00000506267 LCE1BQ5T7P3 118 aa5.33□□□□□ -1.56
HMGB2-204ENST00000506267 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
HMGB2-204ENST00000506267 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
HMGB2-204ENST00000506267 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
HMGB2-204ENST00000506267 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
HMGB2-204ENST00000506267 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.63
HMGB2-204ENST00000506267 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.87□□□□□ -1.63
HMGB2-204ENST00000506267 KRTAP4-12Q9BQ66 201 aa4.84□□□□□ -1.63
HMGB2-204ENST00000506267 KRTAP5-11Q6L8G4 156 aa4.8□□□□□ -1.64
HMGB2-204ENST00000506267 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
HMGB2-204ENST00000506267 H3BS24 57 aa4.55□□□□□ -1.68
HMGB2-204ENST00000506267 KRTAP21-2Q3LI59 83 aa4.5□□□□□ -1.69
HMGB2-204ENST00000506267 PHGR1C9JFL3 82 aa4.15□□□□□ -1.75
HMGB2-204ENST00000506267 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
HMGB2-204ENST00000506267 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
HMGB2-204ENST00000506267 MUC19Q7Z5P9 8384 aa3.83□□□□□ -1.8
HMGB2-204ENST00000506267 PRM1P04553 51 aa3.73□□□□□ -1.81
HMGB2-204ENST00000506267 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
HMGB2-204ENST00000506267 INE1O15225 51 aa3.2□□□□□ -1.9
HMGB2-204ENST00000506267 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
HMGB2-204ENST00000506267 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 9.4 ms