RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 TNP1P09430 55 aa8.6□□□□□ -1.03
HERC4-212ENST00000505760 KRTAP4-3Q9BYR4 195 aa8.6□□□□□ -1.03
HERC4-212ENST00000505760 AHNAK2Q8IVF2 5795 aa8.56□□□□□ -1.04
HERC4-212ENST00000505760 KRTAP5-4Q6L8H1 288 aa8.53□□□□□ -1.04
HERC4-212ENST00000505760 KRTAP5-10Q6L8G5 202 aa8.37□□□□□ -1.07
HERC4-212ENST00000505760 PRR15LQ9BU68 103 aa8.32□□□□□ -1.08
HERC4-212ENST00000505760 KRTAP12-3P60328 96 aa8.31□□□□□ -1.08
HERC4-212ENST00000505760 KRTAP4-7Q9BYR0 210 aa8.31□□□□□ -1.08
HERC4-212ENST00000505760 ANAPC13Q9BS18 74 aa8.24□□□□□ -1.09
HERC4-212ENST00000505760 KRTAP5-3Q6L8H2 238 aa8.12□□□□□ -1.11
HERC4-212ENST00000505760 ATP5EP56381 51 aaPredicted RBP8.11□□□□□ -1.11
HERC4-212ENST00000505760 LINC01558Q9Y6Z2 57 aa8.11□□□□□ -1.11
HERC4-212ENST00000505760 KRTAP20-2Q3LI61 65 aa8.1□□□□□ -1.11
HERC4-212ENST00000505760 CCDC179H3BU77 68 aa8.08□□□□□ -1.12
HERC4-212ENST00000505760 KRTAP5-7Q6L8G8 165 aa8.08□□□□□ -1.12
HERC4-212ENST00000505760 KRTAP5-5Q701N2 237 aaPredicted RBP8.07□□□□□ -1.12
HERC4-212ENST00000505760 SPRR5A0A1B0GTR4 108 aa8.03□□□□□ -1.12
HERC4-212ENST00000505760 UQCR11O14957 56 aa8.02□□□□□ -1.13
HERC4-212ENST00000505760 KRTAP4-12Q9BQ66 201 aa8□□□□□ -1.13
HERC4-212ENST00000505760 KRTAP12-4P60329 112 aa7.99□□□□□ -1.13
HERC4-212ENST00000505760 KRTAP25-1Q3LHN0 102 aa7.95□□□□□ -1.14
HERC4-212ENST00000505760 KRTAP19-4Q3LI73 84 aa7.94□□□□□ -1.14
HERC4-212ENST00000505760 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
HERC4-212ENST00000505760 SYNE1Q8NF91 8797 aaKnown RBP7.81□□□□□ -1.16
HERC4-212ENST00000505760 K7ERS5 55 aa7.76□□□□□ -1.17
HERC4-212ENST00000505760 TMEM258P61165 79 aa7.76□□□□□ -1.17
HERC4-212ENST00000505760 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
HERC4-212ENST00000505760 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
HERC4-212ENST00000505760 LCE3CQ5T5A8 94 aa7.61□□□□□ -1.19
HERC4-212ENST00000505760 KRTAP9-9Q9BYP9 154 aa7.59□□□□□ -1.19
HERC4-212ENST00000505760 KRTAP9-4Q9BYQ2 154 aa7.59□□□□□ -1.19
HERC4-212ENST00000505760 PSPHP1O15172 72 aa7.49□□□□□ -1.21
HERC4-212ENST00000505760 KRTAP4-11Q9BYQ6 195 aa7.47□□□□□ -1.21
HERC4-212ENST00000505760 MT1AP04731 61 aa7.44□□□□□ -1.22
HERC4-212ENST00000505760 V9GYY9 64 aa7.44□□□□□ -1.22
HERC4-212ENST00000505760 KRTAP6-1Q3LI64 71 aa7.42□□□□□ -1.22
HERC4-212ENST00000505760 KRTAP5-2Q701N4 177 aa7.42□□□□□ -1.22
HERC4-212ENST00000505760 Q1T7F1 81 aa7.34□□□□□ -1.23
HERC4-212ENST00000505760 CDC42SE1Q9NRR8 79 aa7.29□□□□□ -1.24
HERC4-212ENST00000505760 A6NED7 52 aa7.23□□□□□ -1.25
HERC4-212ENST00000505760 KRTAP5-8O75690 187 aa7.21□□□□□ -1.26
HERC4-212ENST00000505760 RPS28P62857 69 aaKnown RBP7.2□□□□□ -1.26
HERC4-212ENST00000505760 KRTAP9-6A8MVA2 160 aa7.17□□□□□ -1.26
HERC4-212ENST00000505760 KRTAP6-2Q3LI66 62 aa7.16□□□□□ -1.26
HERC4-212ENST00000505760 ROMO1P60602 79 aa7.13□□□□□ -1.27
HERC4-212ENST00000505760 AHNAKQ09666 5890 aaKnown RBP7.11□□□□□ -1.27
HERC4-212ENST00000505760 MUC5BQ9HC84 5762 aaPredicted RBP7.1□□□□□ -1.27
HERC4-212ENST00000505760 MUC5ACP98088 5654 aa7.07□□□□□ -1.28
HERC4-212ENST00000505760 OBSCNQ5VST9 7968 aa7.06□□□□□ -1.28
HERC4-212ENST00000505760 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
HERC4-212ENST00000505760 MT3P25713 68 aa6.84□□□□□ -1.31
HERC4-212ENST00000505760 KRTAP4-2Q9BYR5 136 aa6.76□□□□□ -1.33
HERC4-212ENST00000505760 KRTAP5-1Q6L8H4 278 aa6.71□□□□□ -1.34
HERC4-212ENST00000505760 PCP4P48539 62 aa6.42□□□□□ -1.38
HERC4-212ENST00000505760 LCE1EQ5T753 118 aa6.33□□□□□ -1.4
HERC4-212ENST00000505760 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
HERC4-212ENST00000505760 LCE1BQ5T7P3 118 aa6.03□□□□□ -1.44
HERC4-212ENST00000505760 LCE1CQ5T751 118 aa5.88□□□□□ -1.47
HERC4-212ENST00000505760 BRK1Q8WUW1 75 aa5.79□□□□□ -1.48
HERC4-212ENST00000505760 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
HERC4-212ENST00000505760 PMAIP1Q13794 54 aa5.42□□□□□ -1.54
HERC4-212ENST00000505760 KRTAP5-11Q6L8G4 156 aa5.35□□□□□ -1.55
HERC4-212ENST00000505760 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
HERC4-212ENST00000505760 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.29□□□□□ -1.56
HERC4-212ENST00000505760 LCE1FQ5T754 118 aa5.28□□□□□ -1.56
HERC4-212ENST00000505760 LCE3EQ5T5B0 92 aa5.06□□□□□ -1.6
HERC4-212ENST00000505760 PHGR1C9JFL3 82 aa4.92□□□□□ -1.62
HERC4-212ENST00000505760 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
HERC4-212ENST00000505760 KRTAP21-2Q3LI59 83 aa4.88□□□□□ -1.63
HERC4-212ENST00000505760 LUZP6Q538Z0 58 aa4.6□□□□□ -1.67
HERC4-212ENST00000505760 PRO0628Q9UI54 55 aa4.6□□□□□ -1.67
HERC4-212ENST00000505760 KRTAP4-4Q9BYR3 166 aa4.55□□□□□ -1.68
HERC4-212ENST00000505760 KTN1-AS1Q86SY8 53 aa4.53□□□□□ -1.68
HERC4-212ENST00000505760 MUC19Q7Z5P9 8384 aa4.4□□□□□ -1.71
HERC4-212ENST00000505760 KRTAP21-1Q3LI58 79 aa3.73□□□□□ -1.81
HERC4-212ENST00000505760 PRM1P04553 51 aa3.63□□□□□ -1.83
HERC4-212ENST00000505760 MUC16Q8WXI7 14507 aa3.1□□□□□ -1.91
HERC4-212ENST00000505760 INE1O15225 51 aa2.74□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms