RNA–Protein interactions for RNA: ENST00000505555.5

SDHA-206, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,230 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-206ENST00000505555 INE1O15225 51 aa6.82□□□□□ -1.32
SDHA-206ENST00000505555 FCGBPQ9Y6R7 5405 aaPredicted RBP6.74□□□□□ -1.33
SDHA-206ENST00000505555 KRTAP19-4Q3LI73 84 aa6.66□□□□□ -1.34
SDHA-206ENST00000505555 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
SDHA-206ENST00000505555 KRTAP4-3Q9BYR4 195 aa6.53□□□□□ -1.36
SDHA-206ENST00000505555 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.37
SDHA-206ENST00000505555 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.37
SDHA-206ENST00000505555 KRTAP2-1Q9BYU5 128 aa6.52□□□□□ -1.37
SDHA-206ENST00000505555 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.49□□□□□ -1.37
SDHA-206ENST00000505555 KRTAP19-3Q7Z4W3 81 aa6.45□□□□□ -1.38
SDHA-206ENST00000505555 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
SDHA-206ENST00000505555 MT1MQ8N339 61 aa6.43□□□□□ -1.38
SDHA-206ENST00000505555 MACF1Q9UPN3 7388 aaKnown RBP6.41□□□□□ -1.38
SDHA-206ENST00000505555 MT1GP13640 62 aa6.41□□□□□ -1.38
SDHA-206ENST00000505555 SPRR2FQ96RM1 72 aa6.37□□□□□ -1.39
SDHA-206ENST00000505555 KRTAP9-7A8MTY7 169 aa6.31□□□□□ -1.4
SDHA-206ENST00000505555 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
SDHA-206ENST00000505555 DSTQ03001 7570 aaKnown RBP6.28□□□□□ -1.4
SDHA-206ENST00000505555 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
SDHA-206ENST00000505555 KRTAP6-3Q3LI67 103 aa6.17□□□□□ -1.42
SDHA-206ENST00000505555 MDN1Q9NU22 5596 aa6.15□□□□□ -1.43
SDHA-206ENST00000505555 KRTAP5-9P26371 169 aa6.02□□□□□ -1.45
SDHA-206ENST00000505555 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
SDHA-206ENST00000505555 SPRR2EP22531 72 aa5.85□□□□□ -1.47
SDHA-206ENST00000505555 SPRR2BP35325 72 aa5.85□□□□□ -1.47
SDHA-206ENST00000505555 SPRR2AP35326 72 aa5.85□□□□□ -1.47
SDHA-206ENST00000505555 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
SDHA-206ENST00000505555 NEBP20929 6669 aa5.84□□□□□ -1.48
SDHA-206ENST00000505555 KRTAP6-1Q3LI64 71 aa5.81□□□□□ -1.48
SDHA-206ENST00000505555 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
SDHA-206ENST00000505555 MT1AP04731 61 aa5.72□□□□□ -1.49
SDHA-206ENST00000505555 KRTAP4-9Q9BYQ8 210 aa5.71□□□□□ -1.49
SDHA-206ENST00000505555 KRTAP5-5Q701N2 237 aaPredicted RBP5.7□□□□□ -1.5
SDHA-206ENST00000505555 KRTAP12-4P60329 112 aa5.69□□□□□ -1.5
SDHA-206ENST00000505555 SPRR2DP22532 72 aa5.6□□□□□ -1.51
SDHA-206ENST00000505555 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
SDHA-206ENST00000505555 KRTAP9-4Q9BYQ2 154 aa5.42□□□□□ -1.54
SDHA-206ENST00000505555 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
SDHA-206ENST00000505555 KRTAP2-2Q9BYT5 123 aa5.35□□□□□ -1.55
SDHA-206ENST00000505555 LCE3EQ5T5B0 92 aa5.31□□□□□ -1.56
SDHA-206ENST00000505555 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
SDHA-206ENST00000505555 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
SDHA-206ENST00000505555 MT3P25713 68 aa5.15□□□□□ -1.58
SDHA-206ENST00000505555 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
SDHA-206ENST00000505555 PRM1P04553 51 aa5.03□□□□□ -1.6
SDHA-206ENST00000505555 KRTAP4-6Q9BYQ5 205 aa4.99□□□□□ -1.61
SDHA-206ENST00000505555 MT4P47944 62 aa4.97□□□□□ -1.61
SDHA-206ENST00000505555 LCE4AQ5TA78 99 aa4.95□□□□□ -1.62
SDHA-206ENST00000505555 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
SDHA-206ENST00000505555 KRTAP20-2Q3LI61 65 aa4.82□□□□□ -1.64
SDHA-206ENST00000505555 HMCN1Q96RW7 5635 aa4.8□□□□□ -1.64
SDHA-206ENST00000505555 KRTAP5-2Q701N4 177 aa4.73□□□□□ -1.65
SDHA-206ENST00000505555 KRTAP5-3Q6L8H2 238 aa4.6□□□□□ -1.67
SDHA-206ENST00000505555 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
SDHA-206ENST00000505555 GPR98Q8WXG9 6306 aa4.44□□□□□ -1.7
SDHA-206ENST00000505555 MUC5ACP98088 5654 aa4.38□□□□□ -1.71
SDHA-206ENST00000505555 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SDHA-206ENST00000505555 LCE1EQ5T753 118 aa4.25□□□□□ -1.73
SDHA-206ENST00000505555 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
SDHA-206ENST00000505555 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
SDHA-206ENST00000505555 KRTAP5-7Q6L8G8 165 aa4.11□□□□□ -1.75
SDHA-206ENST00000505555 KRTAP5-1Q6L8H4 278 aa4.07□□□□□ -1.76
SDHA-206ENST00000505555 KRTAP4-2Q9BYR5 136 aa4.06□□□□□ -1.76
SDHA-206ENST00000505555 LCE1CQ5T751 118 aa4.02□□□□□ -1.77
SDHA-206ENST00000505555 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
SDHA-206ENST00000505555 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
SDHA-206ENST00000505555 KRTAP21-2Q3LI59 83 aa3.75□□□□□ -1.81
SDHA-206ENST00000505555 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
SDHA-206ENST00000505555 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
SDHA-206ENST00000505555 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SDHA-206ENST00000505555 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
SDHA-206ENST00000505555 KRTAP4-4Q9BYR3 166 aa3.48□□□□□ -1.85
SDHA-206ENST00000505555 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
SDHA-206ENST00000505555 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
SDHA-206ENST00000505555 KRTAP21-1Q3LI58 79 aa3.21□□□□□ -1.9
SDHA-206ENST00000505555 MUC19Q7Z5P9 8384 aa3.17□□□□□ -1.9
SDHA-206ENST00000505555 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
SDHA-206ENST00000505555 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 108.1 ms