RNA–Protein interactions for RNA: ENST00000505484.5

PRDM5-207, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best)

Gene PRDM5, Length 2,396 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-207ENST00000505484 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
PRDM5-207ENST00000505484 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
PRDM5-207ENST00000505484 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
PRDM5-207ENST00000505484 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.56
PRDM5-207ENST00000505484 MT1LQ93083 61 aa5.32□□□□□ -1.56
PRDM5-207ENST00000505484 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
PRDM5-207ENST00000505484 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
PRDM5-207ENST00000505484 MT1EP04732 61 aa5.24□□□□□ -1.57
PRDM5-207ENST00000505484 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
PRDM5-207ENST00000505484 MDN1Q9NU22 5596 aa5.09□□□□□ -1.59
PRDM5-207ENST00000505484 KRTAP9-6A0A140TA67 174 aa5.03□□□□□ -1.6
PRDM5-207ENST00000505484 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
PRDM5-207ENST00000505484 DSTQ03001 7570 aaKnown RBP5.01□□□□□ -1.61
PRDM5-207ENST00000505484 LOC100996750A0A140TA64 210 aa5□□□□□ -1.61
PRDM5-207ENST00000505484 MT1GP13640 62 aa4.95□□□□□ -1.62
PRDM5-207ENST00000505484 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
PRDM5-207ENST00000505484 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
PRDM5-207ENST00000505484 MT1MQ8N339 61 aa4.86□□□□□ -1.63
PRDM5-207ENST00000505484 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
PRDM5-207ENST00000505484 KRTAP5-9P26371 169 aa4.79□□□□□ -1.64
PRDM5-207ENST00000505484 MT1AP04731 61 aa4.77□□□□□ -1.65
PRDM5-207ENST00000505484 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
PRDM5-207ENST00000505484 LCE5AQ5TCM9 118 aa4.75□□□□□ -1.65
PRDM5-207ENST00000505484 SPRR2EP22531 72 aa4.72□□□□□ -1.65
PRDM5-207ENST00000505484 SPRR2BP35325 72 aa4.72□□□□□ -1.65
PRDM5-207ENST00000505484 SPRR2AP35326 72 aa4.72□□□□□ -1.65
PRDM5-207ENST00000505484 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
PRDM5-207ENST00000505484 KRTAP6-3Q3LI67 103 aa4.68□□□□□ -1.66
PRDM5-207ENST00000505484 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
PRDM5-207ENST00000505484 KRTAP9-7A8MTY7 169 aa4.63□□□□□ -1.67
PRDM5-207ENST00000505484 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
PRDM5-207ENST00000505484 LCE3DQ9BYE3 92 aa4.61□□□□□ -1.67
PRDM5-207ENST00000505484 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
PRDM5-207ENST00000505484 PRM1P04553 51 aa4.57□□□□□ -1.68
PRDM5-207ENST00000505484 NEBP20929 6669 aa4.53□□□□□ -1.68
PRDM5-207ENST00000505484 SPRR2DP22532 72 aa4.52□□□□□ -1.69
PRDM5-207ENST00000505484 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
PRDM5-207ENST00000505484 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
PRDM5-207ENST00000505484 KRTAP6-2Q3LI66 62 aa4.31□□□□□ -1.72
PRDM5-207ENST00000505484 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
PRDM5-207ENST00000505484 KRTAP2-2Q9BYT5 123 aa4.13□□□□□ -1.75
PRDM5-207ENST00000505484 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
PRDM5-207ENST00000505484 MT4P47944 62 aa4.06□□□□□ -1.76
PRDM5-207ENST00000505484 KRTAP20-1Q3LI63 56 aa4.05□□□□□ -1.76
PRDM5-207ENST00000505484 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
PRDM5-207ENST00000505484 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
PRDM5-207ENST00000505484 HMCN1Q96RW7 5635 aa3.99□□□□□ -1.77
PRDM5-207ENST00000505484 MT3P25713 68 aa3.99□□□□□ -1.77
PRDM5-207ENST00000505484 LCE1DQ5T752 114 aa3.91□□□□□ -1.78
PRDM5-207ENST00000505484 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
PRDM5-207ENST00000505484 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
PRDM5-207ENST00000505484 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
PRDM5-207ENST00000505484 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
PRDM5-207ENST00000505484 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
PRDM5-207ENST00000505484 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
PRDM5-207ENST00000505484 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
PRDM5-207ENST00000505484 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
PRDM5-207ENST00000505484 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
PRDM5-207ENST00000505484 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
PRDM5-207ENST00000505484 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
PRDM5-207ENST00000505484 LCE1BQ5T7P3 118 aa3.22□□□□□ -1.89
PRDM5-207ENST00000505484 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
PRDM5-207ENST00000505484 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
PRDM5-207ENST00000505484 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
PRDM5-207ENST00000505484 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
PRDM5-207ENST00000505484 MUC5BQ9HC84 5762 aaPredicted RBP3.02□□□□□ -1.93
PRDM5-207ENST00000505484 LCE1CQ5T751 118 aa3□□□□□ -1.93
PRDM5-207ENST00000505484 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
PRDM5-207ENST00000505484 KRTAP5-7Q6L8G8 165 aa2.94□□□□□ -1.94
PRDM5-207ENST00000505484 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.95
PRDM5-207ENST00000505484 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.89□□□□□ -1.95
PRDM5-207ENST00000505484 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
PRDM5-207ENST00000505484 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
PRDM5-207ENST00000505484 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
PRDM5-207ENST00000505484 AHNAKQ09666 5890 aaKnown RBP2.53□□□□□ -2
PRDM5-207ENST00000505484 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
PRDM5-207ENST00000505484 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
PRDM5-207ENST00000505484 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 56.3 ms