RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.9□□□□□ -1.95
PROM1-206ENST00000505450 KRTAP4-8A0A0G2JLE6 195 aa2.89□□□□□ -1.95
PROM1-206ENST00000505450 KRTAP4-8Q9BYQ9 185 aa2.89□□□□□ -1.95
PROM1-206ENST00000505450 SPRR2DP22532 72 aa2.89□□□□□ -1.95
PROM1-206ENST00000505450 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
PROM1-206ENST00000505450 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
PROM1-206ENST00000505450 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
PROM1-206ENST00000505450 KRTAP20-1Q3LI63 56 aa2.78□□□□□ -1.96
PROM1-206ENST00000505450 SSPOA2VEC9 5147 aa2.76□□□□□ -1.97
PROM1-206ENST00000505450 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
PROM1-206ENST00000505450 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
PROM1-206ENST00000505450 KRTAP6-3Q3LI67 103 aa2.69□□□□□ -1.98
PROM1-206ENST00000505450 KRTAP12-4P60329 112 aa2.66□□□□□ -1.98
PROM1-206ENST00000505450 MT1GP13640 62 aa2.66□□□□□ -1.98
PROM1-206ENST00000505450 MT4P47944 62 aa2.66□□□□□ -1.98
PROM1-206ENST00000505450 KRTAP19-7Q3SYF9 63 aa2.66□□□□□ -1.98
PROM1-206ENST00000505450 LCE3BQ5TA77 95 aa2.65□□□□□ -1.98
PROM1-206ENST00000505450 MT1LQ93083 61 aa2.65□□□□□ -1.98
PROM1-206ENST00000505450 MDN1Q9NU22 5596 aa2.64□□□□□ -1.99
PROM1-206ENST00000505450 LOC100996750A0A140TA64 210 aa2.64□□□□□ -1.99
PROM1-206ENST00000505450 KRTAP2-3P0C7H8 128 aa2.63□□□□□ -1.99
PROM1-206ENST00000505450 KRTAP2-4Q9BYR9 128 aa2.63□□□□□ -1.99
PROM1-206ENST00000505450 KRTAP2-1Q9BYU5 128 aa2.63□□□□□ -1.99
PROM1-206ENST00000505450 NEBP20929 6669 aa2.63□□□□□ -1.99
PROM1-206ENST00000505450 MT1EP04732 61 aa2.62□□□□□ -1.99
PROM1-206ENST00000505450 KRTAP4-3Q9BYR4 195 aa2.62□□□□□ -1.99
PROM1-206ENST00000505450 KRTAP19-4Q3LI73 84 aa2.56□□□□□ -2
PROM1-206ENST00000505450 KRTAP4-9Q9BYQ8 210 aa2.56□□□□□ -2
PROM1-206ENST00000505450 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
PROM1-206ENST00000505450 MUC12Q9UKN1 5478 aa2.55□□□□□ -2
PROM1-206ENST00000505450 KRTAP19-3Q7Z4W3 81 aa2.54□□□□□ -2
PROM1-206ENST00000505450 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2
PROM1-206ENST00000505450 MT1MQ8N339 61 aa2.47□□□□□ -2.01
PROM1-206ENST00000505450 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
PROM1-206ENST00000505450 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
PROM1-206ENST00000505450 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
PROM1-206ENST00000505450 PRM1P04553 51 aa2.36□□□□□ -2.03
PROM1-206ENST00000505450 KRTAP5-9P26371 169 aa2.3□□□□□ -2.04
PROM1-206ENST00000505450 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
PROM1-206ENST00000505450 LCE5AQ5TCM9 118 aa2.25□□□□□ -2.05
PROM1-206ENST00000505450 LCE4AQ5TA78 99 aa2.24□□□□□ -2.05
PROM1-206ENST00000505450 LCE1DQ5T752 114 aa2.23□□□□□ -2.05
PROM1-206ENST00000505450 MT1AP04731 61 aa2.23□□□□□ -2.05
PROM1-206ENST00000505450 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
PROM1-206ENST00000505450 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
PROM1-206ENST00000505450 KRTAP6-2Q3LI66 62 aa2.18□□□□□ -2.06
PROM1-206ENST00000505450 MT3P25713 68 aa2.16□□□□□ -2.06
PROM1-206ENST00000505450 KRTAP4-6Q9BYQ5 205 aa2.15□□□□□ -2.06
PROM1-206ENST00000505450 KRTAP5-5Q701N2 237 aaPredicted RBP2.11□□□□□ -2.07
PROM1-206ENST00000505450 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
PROM1-206ENST00000505450 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
PROM1-206ENST00000505450 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
PROM1-206ENST00000505450 KRTAP5-3Q6L8H2 238 aa1.95□□□□□ -2.1
PROM1-206ENST00000505450 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
PROM1-206ENST00000505450 HMCN1Q96RW7 5635 aa1.94□□□□□ -2.1
PROM1-206ENST00000505450 AHNAK2Q8IVF2 5795 aa1.93□□□□□ -2.1
PROM1-206ENST00000505450 LCE1CQ5T751 118 aa1.9□□□□□ -2.11
PROM1-206ENST00000505450 LCE1EQ5T753 118 aa1.9□□□□□ -2.11
PROM1-206ENST00000505450 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
PROM1-206ENST00000505450 KRTAP4-11Q9BYQ6 195 aa1.9□□□□□ -2.11
PROM1-206ENST00000505450 KRTAP5-4Q6L8H1 288 aa1.84□□□□□ -2.12
PROM1-206ENST00000505450 KRTAP4-12Q9BQ66 201 aa1.78□□□□□ -2.12
PROM1-206ENST00000505450 KRTAP4-2Q9BYR5 136 aa1.78□□□□□ -2.12
PROM1-206ENST00000505450 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
PROM1-206ENST00000505450 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
PROM1-206ENST00000505450 KRTAP5-10Q6L8G5 202 aa1.64□□□□□ -2.15
PROM1-206ENST00000505450 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
PROM1-206ENST00000505450 KRTAP4-4Q9BYR3 166 aa1.62□□□□□ -2.15
PROM1-206ENST00000505450 KRTAP5-7Q6L8G8 165 aa1.56□□□□□ -2.16
PROM1-206ENST00000505450 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
PROM1-206ENST00000505450 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
PROM1-206ENST00000505450 KRTAP5-1Q6L8H4 278 aa1.39□□□□□ -2.19
PROM1-206ENST00000505450 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
PROM1-206ENST00000505450 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
PROM1-206ENST00000505450 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
PROM1-206ENST00000505450 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
PROM1-206ENST00000505450 MUC16Q8WXI7 14507 aa0.81□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 82.3 ms