RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 KRTAP4-3Q9BYR4 195 aa6.92□□□□□ -1.3
UBE2D3-220ENST00000505307 KRTAP5-4Q6L8H1 288 aa6.91□□□□□ -1.3
UBE2D3-220ENST00000505307 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
UBE2D3-220ENST00000505307 PRR15LQ9BU68 103 aa6.86□□□□□ -1.31
UBE2D3-220ENST00000505307 ANAPC13Q9BS18 74 aa6.8□□□□□ -1.32
UBE2D3-220ENST00000505307 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
UBE2D3-220ENST00000505307 ATP5EP56381 51 aaPredicted RBP6.74□□□□□ -1.33
UBE2D3-220ENST00000505307 KRTAP5-10Q6L8G5 202 aa6.74□□□□□ -1.33
UBE2D3-220ENST00000505307 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
UBE2D3-220ENST00000505307 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
UBE2D3-220ENST00000505307 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
UBE2D3-220ENST00000505307 UQCR11O14957 56 aa6.61□□□□□ -1.35
UBE2D3-220ENST00000505307 KRTAP5-3Q6L8H2 238 aa6.54□□□□□ -1.36
UBE2D3-220ENST00000505307 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
UBE2D3-220ENST00000505307 KRTAP25-1Q3LHN0 102 aa6.53□□□□□ -1.36
UBE2D3-220ENST00000505307 KRTAP20-2Q3LI61 65 aa6.53□□□□□ -1.36
UBE2D3-220ENST00000505307 SPRR5A0A1B0GTR4 108 aa6.52□□□□□ -1.37
UBE2D3-220ENST00000505307 KRTAP5-7Q6L8G8 165 aa6.51□□□□□ -1.37
UBE2D3-220ENST00000505307 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
UBE2D3-220ENST00000505307 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
UBE2D3-220ENST00000505307 TMEM258P61165 79 aa6.44□□□□□ -1.38
UBE2D3-220ENST00000505307 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
UBE2D3-220ENST00000505307 K7ERS5 55 aa6.4□□□□□ -1.38
UBE2D3-220ENST00000505307 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
UBE2D3-220ENST00000505307 SYNE1Q8NF91 8797 aaKnown RBP6.3□□□□□ -1.4
UBE2D3-220ENST00000505307 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
UBE2D3-220ENST00000505307 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
UBE2D3-220ENST00000505307 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
UBE2D3-220ENST00000505307 KRTAP4-12Q9BQ66 201 aa6.2□□□□□ -1.42
UBE2D3-220ENST00000505307 V9GYY9 64 aa6.2□□□□□ -1.42
UBE2D3-220ENST00000505307 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
UBE2D3-220ENST00000505307 PSPHP1O15172 72 aa6.13□□□□□ -1.43
UBE2D3-220ENST00000505307 Q1T7F1 81 aa6.09□□□□□ -1.43
UBE2D3-220ENST00000505307 MT1AP04731 61 aa6.04□□□□□ -1.44
UBE2D3-220ENST00000505307 KRTAP5-2Q701N4 177 aa6.02□□□□□ -1.45
UBE2D3-220ENST00000505307 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
UBE2D3-220ENST00000505307 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
UBE2D3-220ENST00000505307 KRTAP6-1Q3LI64 71 aa5.98□□□□□ -1.45
UBE2D3-220ENST00000505307 A6NED7 52 aa5.94□□□□□ -1.46
UBE2D3-220ENST00000505307 RPS28P62857 69 aaKnown RBP5.9□□□□□ -1.46
UBE2D3-220ENST00000505307 ROMO1P60602 79 aa5.87□□□□□ -1.47
UBE2D3-220ENST00000505307 KRTAP4-2Q9BYR5 136 aa5.86□□□□□ -1.47
UBE2D3-220ENST00000505307 KRTAP5-8O75690 187 aa5.8□□□□□ -1.48
UBE2D3-220ENST00000505307 KRTAP9-6A8MVA2 160 aa5.79□□□□□ -1.48
UBE2D3-220ENST00000505307 KRTAP6-2Q3LI66 62 aa5.77□□□□□ -1.49
UBE2D3-220ENST00000505307 AHNAKQ09666 5890 aaKnown RBP5.75□□□□□ -1.49
UBE2D3-220ENST00000505307 OBSCNQ5VST9 7968 aa5.74□□□□□ -1.49
UBE2D3-220ENST00000505307 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.49
UBE2D3-220ENST00000505307 MUC5ACP98088 5654 aa5.71□□□□□ -1.5
UBE2D3-220ENST00000505307 MT3P25713 68 aa5.56□□□□□ -1.52
UBE2D3-220ENST00000505307 KRTAP5-1Q6L8H4 278 aa5.42□□□□□ -1.54
UBE2D3-220ENST00000505307 PCP4P48539 62 aa5.18□□□□□ -1.58
UBE2D3-220ENST00000505307 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
UBE2D3-220ENST00000505307 LCE1BQ5T7P3 118 aa4.85□□□□□ -1.63
UBE2D3-220ENST00000505307 LCE1CQ5T751 118 aa4.79□□□□□ -1.64
UBE2D3-220ENST00000505307 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
UBE2D3-220ENST00000505307 PMAIP1Q13794 54 aa4.51□□□□□ -1.69
UBE2D3-220ENST00000505307 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
UBE2D3-220ENST00000505307 PRAC1Q96KF2 57 aa4.37□□□□□ -1.71
UBE2D3-220ENST00000505307 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
UBE2D3-220ENST00000505307 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.34□□□□□ -1.71
UBE2D3-220ENST00000505307 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
UBE2D3-220ENST00000505307 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
UBE2D3-220ENST00000505307 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
UBE2D3-220ENST00000505307 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
UBE2D3-220ENST00000505307 PRO0628Q9UI54 55 aa3.91□□□□□ -1.78
UBE2D3-220ENST00000505307 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
UBE2D3-220ENST00000505307 KTN1-AS1Q86SY8 53 aa3.81□□□□□ -1.8
UBE2D3-220ENST00000505307 SVIPQ8NHG7 77 aa3.7□□□□□ -1.82
UBE2D3-220ENST00000505307 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
UBE2D3-220ENST00000505307 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
UBE2D3-220ENST00000505307 H3BS24 57 aa3.52□□□□□ -1.85
UBE2D3-220ENST00000505307 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
UBE2D3-220ENST00000505307 PRM1P04553 51 aa2.95□□□□□ -1.94
UBE2D3-220ENST00000505307 NDUFAF8A1L188 74 aa2.72□□□□□ -1.97
UBE2D3-220ENST00000505307 MUC16Q8WXI7 14507 aa2.5□□□□□ -2.01
UBE2D3-220ENST00000505307 A0A0A0MQY5 61 aa2.4□□□□□ -2.03
UBE2D3-220ENST00000505307 INE1O15225 51 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 20.2 ms