RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 MXRA5Q9NR99 2828 aa0.5□□□□□ -2.33
LINC01088-202ENST00000505149 MGAM2Q2M2H8 2515 aa0.5□□□□□ -2.33
LINC01088-202ENST00000505149 LAMA1P25391 3075 aa0.49□□□□□ -2.33
LINC01088-202ENST00000505149 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
LINC01088-202ENST00000505149 MAST4O15021 2626 aa0.49□□□□□ -2.33
LINC01088-202ENST00000505149 SPRR2EP22531 72 aa0.49□□□□□ -2.33
LINC01088-202ENST00000505149 USP34Q70CQ2 3546 aa0.48□□□□□ -2.33
LINC01088-202ENST00000505149 MT1EP04732 61 aa0.47□□□□□ -2.33
LINC01088-202ENST00000505149 ASPMQ8IZT6 3477 aa0.47□□□□□ -2.33
LINC01088-202ENST00000505149 CENPEQ02224 2701 aa0.47□□□□□ -2.33
LINC01088-202ENST00000505149 SPTAN1Q13813 2472 aaKnown RBP0.46□□□□□ -2.34
LINC01088-202ENST00000505149 LAMA2P24043 3122 aaKnown RBP0.46□□□□□ -2.34
LINC01088-202ENST00000505149 VCANP13611 3396 aa0.45□□□□□ -2.34
LINC01088-202ENST00000505149 STAB2Q8WWQ8 2551 aa0.45□□□□□ -2.34
LINC01088-202ENST00000505149 MT1LQ93083 61 aa0.44□□□□□ -2.34
LINC01088-202ENST00000505149 EP400Q96L91 3159 aa0.44□□□□□ -2.34
LINC01088-202ENST00000505149 IGSF10Q6WRI0 2623 aa0.44□□□□□ -2.34
LINC01088-202ENST00000505149 CEP295Q9C0D2 2601 aa0.43□□□□□ -2.34
LINC01088-202ENST00000505149 MUC5ACP98088 5654 aa0.43□□□□□ -2.34
LINC01088-202ENST00000505149 MT1HP80294 61 aa0.43□□□□□ -2.34
LINC01088-202ENST00000505149 EYSQ5T1H1 3165 aa0.43□□□□□ -2.34
LINC01088-202ENST00000505149 MYO15AQ9UKN7 3530 aa0.42□□□□□ -2.34
LINC01088-202ENST00000505149 PCNTO95613 3336 aa0.42□□□□□ -2.34
LINC01088-202ENST00000505149 SPRR2GQ9BYE4 73 aa0.42□□□□□ -2.34
LINC01088-202ENST00000505149 HERC1Q15751 4861 aa0.42□□□□□ -2.34
LINC01088-202ENST00000505149 TLN1Q9Y490 2541 aaKnown RBP0.41□□□□□ -2.34
LINC01088-202ENST00000505149 LRP2P98164 4655 aa0.41□□□□□ -2.34
LINC01088-202ENST00000505149 BRCA2P51587 3418 aa0.41□□□□□ -2.34
LINC01088-202ENST00000505149 CENPFP49454 3210 aa0.39□□□□□ -2.35
LINC01088-202ENST00000505149 STARD9Q9P2P6 4700 aa0.39□□□□□ -2.35
LINC01088-202ENST00000505149 UNC80Q8N2C7 3258 aa0.37□□□□□ -2.35
LINC01088-202ENST00000505149 MT1XP80297 61 aa0.37□□□□□ -2.35
LINC01088-202ENST00000505149 WDFY3Q8IZQ1 3526 aa0.37□□□□□ -2.35
LINC01088-202ENST00000505149 HMCN2Q8NDA2 5059 aa0.36□□□□□ -2.35
LINC01088-202ENST00000505149 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
LINC01088-202ENST00000505149 MYO9AB2RTY4 2548 aa0.34□□□□□ -2.36
LINC01088-202ENST00000505149 KMT2DO14686 5537 aa0.34□□□□□ -2.36
LINC01088-202ENST00000505149 DNAH14Q0VDD8 3507 aa0.32□□□□□ -2.36
LINC01088-202ENST00000505149 KRTAP19-8Q3LI54 63 aa0.32□□□□□ -2.36
LINC01088-202ENST00000505149 CDH23Q9H251 3354 aa0.31□□□□□ -2.36
LINC01088-202ENST00000505149 FAT4Q6V0I7 4981 aa0.31□□□□□ -2.36
LINC01088-202ENST00000505149 MT1GP13640 62 aa0.31□□□□□ -2.36
LINC01088-202ENST00000505149 USH2AO75445 5202 aa0.31□□□□□ -2.36
LINC01088-202ENST00000505149 DNHD1Q96M86 4753 aa0.29□□□□□ -2.36
LINC01088-202ENST00000505149 KRTAP19-7Q3SYF9 63 aa0.29□□□□□ -2.36
LINC01088-202ENST00000505149 KMT2CQ8NEZ4 4911 aaKnown RBP0.28□□□□□ -2.36
LINC01088-202ENST00000505149 MT2AP02795 61 aa0.28□□□□□ -2.36
LINC01088-202ENST00000505149 SSPOA2VEC9 5147 aa0.28□□□□□ -2.36
LINC01088-202ENST00000505149 HERC2O95714 4834 aa0.28□□□□□ -2.37
LINC01088-202ENST00000505149 MT1MQ8N339 61 aa0.27□□□□□ -2.37
LINC01088-202ENST00000505149 MUC2Q02817 5179 aa0.26□□□□□ -2.37
LINC01088-202ENST00000505149 KRTAP6-1Q3LI64 71 aa0.26□□□□□ -2.37
LINC01088-202ENST00000505149 BIRC6Q9NR09 4857 aa0.26□□□□□ -2.37
LINC01088-202ENST00000505149 RYR1P21817 5038 aa0.25□□□□□ -2.37
LINC01088-202ENST00000505149 KRTAP19-2Q3LHN2 52 aa0.25□□□□□ -2.37
LINC01088-202ENST00000505149 PCLOQ9Y6V0 5065 aa0.24□□□□□ -2.37
LINC01088-202ENST00000505149 MT1BP07438 61 aa0.23□□□□□ -2.37
LINC01088-202ENST00000505149 MT1HL1P0DM35 61 aa0.23□□□□□ -2.37
LINC01088-202ENST00000505149 UBR4Q5T4S7 5183 aa0.2□□□□□ -2.38
LINC01088-202ENST00000505149 RYR3Q15413 4870 aa0.19□□□□□ -2.38
LINC01088-202ENST00000505149 MT1FP04733 61 aa0.18□□□□□ -2.38
LINC01088-202ENST00000505149 HYDINQ4G0P3 5121 aa0.17□□□□□ -2.38
LINC01088-202ENST00000505149 RNF213Q63HN8 5207 aa0.16□□□□□ -2.38
LINC01088-202ENST00000505149 MUC12Q9UKN1 5478 aa0.15□□□□□ -2.39
LINC01088-202ENST00000505149 EPPK1P58107 5090 aaKnown RBP0.12□□□□□ -2.39
LINC01088-202ENST00000505149 KIAA1109Q2LD37 5005 aa0.1□□□□□ -2.39
LINC01088-202ENST00000505149 MT4P47944 62 aa0.09□□□□□ -2.4
LINC01088-202ENST00000505149 RYR2Q92736 4967 aa0.08□□□□□ -2.4
LINC01088-202ENST00000505149 KRTAP20-2Q3LI61 65 aa0.07□□□□□ -2.4
LINC01088-202ENST00000505149 ABCA13Q86UQ4 5058 aa0.05□□□□□ -2.4
LINC01088-202ENST00000505149 DSTQ03001 7570 aaKnown RBP0.01□□□□□ -2.41
LINC01088-202ENST00000505149 FSIP2Q5CZC0 6907 aa-0.03□□□□□ -2.41
LINC01088-202ENST00000505149 GPR98Q8WXG9 6306 aa-0.04□□□□□ -2.42
LINC01088-202ENST00000505149 SYNE2Q8WXH0 6885 aaKnown RBP-0.04□□□□□ -2.42
LINC01088-202ENST00000505149 KRTAP19-6Q3LI70 58 aa-0.11□□□□□ -2.43
LINC01088-202ENST00000505149 MACF1Q9UPN3 7388 aaKnown RBP-0.15□□□□□ -2.43
LINC01088-202ENST00000505149 KRTAP20-1Q3LI63 56 aa-0.17□□□□□ -2.44
LINC01088-202ENST00000505149 NEBP20929 6669 aa-0.21□□□□□ -2.44
Retrieved 78 of 20,778 RNA–protein pairs in 49.2 ms