RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 LCE3AQ5TA76 89 aa4.64□□□□□ -1.67
DDX41-204ENST00000504807 AHNAKQ09666 5890 aaKnown RBP4.64□□□□□ -1.67
DDX41-204ENST00000504807 C10orf95Q9H7T3 257 aa4.62□□□□□ -1.67
DDX41-204ENST00000504807 PP632Q6XCG6 107 aa4.58□□□□□ -1.68
DDX41-204ENST00000504807 A0A1B0GU69 56 aa4.57□□□□□ -1.68
DDX41-204ENST00000504807 KRTAP4-7Q9BYR0 210 aa4.54□□□□□ -1.68
DDX41-204ENST00000504807 SMIM26A0A096LP01 95 aa4.53□□□□□ -1.68
DDX41-204ENST00000504807 KRTAP20-2Q3LI61 65 aa4.5□□□□□ -1.69
DDX41-204ENST00000504807 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
DDX41-204ENST00000504807 TNP1P09430 55 aa4.48□□□□□ -1.69
DDX41-204ENST00000504807 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
DDX41-204ENST00000504807 MUC5BQ9HC84 5762 aaPredicted RBP4.47□□□□□ -1.69
DDX41-204ENST00000504807 ANAPC13Q9BS18 74 aa4.45□□□□□ -1.7
DDX41-204ENST00000504807 KRTAP12-3P60328 96 aa4.4□□□□□ -1.71
DDX41-204ENST00000504807 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
DDX41-204ENST00000504807 KRTAP5-5Q701N2 237 aaPredicted RBP4.34□□□□□ -1.71
DDX41-204ENST00000504807 PRR15LQ9BU68 103 aa4.31□□□□□ -1.72
DDX41-204ENST00000504807 LOC100996750A0A140TA64 210 aa4.29□□□□□ -1.72
DDX41-204ENST00000504807 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
DDX41-204ENST00000504807 ATP5EP56381 51 aaPredicted RBP4.28□□□□□ -1.72
DDX41-204ENST00000504807 SYNE1Q8NF91 8797 aaKnown RBP4.27□□□□□ -1.73
DDX41-204ENST00000504807 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
DDX41-204ENST00000504807 KRTAP5-8O75690 187 aa4.23□□□□□ -1.73
DDX41-204ENST00000504807 UQCR11O14957 56 aa4.22□□□□□ -1.73
DDX41-204ENST00000504807 TMEM258P61165 79 aa4.17□□□□□ -1.74
DDX41-204ENST00000504807 KRTAP25-1Q3LHN0 102 aa4.17□□□□□ -1.74
DDX41-204ENST00000504807 MIR22HGQ0VDD5 57 aa4.15□□□□□ -1.75
DDX41-204ENST00000504807 PCP4P48539 62 aa4.13□□□□□ -1.75
DDX41-204ENST00000504807 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
DDX41-204ENST00000504807 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
DDX41-204ENST00000504807 PSPHP1O15172 72 aa4.06□□□□□ -1.76
DDX41-204ENST00000504807 KRTAP15-1Q3LI76 137 aa4.06□□□□□ -1.76
DDX41-204ENST00000504807 LCE3CQ5T5A8 94 aa4.05□□□□□ -1.76
DDX41-204ENST00000504807 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
DDX41-204ENST00000504807 KRTAP6-1Q3LI64 71 aa3.99□□□□□ -1.77
DDX41-204ENST00000504807 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
DDX41-204ENST00000504807 Q1T7F1 81 aa3.97□□□□□ -1.77
DDX41-204ENST00000504807 KRTAP5-2Q701N4 177 aa3.97□□□□□ -1.77
DDX41-204ENST00000504807 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
DDX41-204ENST00000504807 K7ERS5 55 aa3.96□□□□□ -1.78
DDX41-204ENST00000504807 MT1AP04731 61 aa3.95□□□□□ -1.78
DDX41-204ENST00000504807 V9GYY9 64 aa3.89□□□□□ -1.79
DDX41-204ENST00000504807 A6NED7 52 aa3.84□□□□□ -1.79
DDX41-204ENST00000504807 KRTAP9-4Q9BYQ2 154 aa3.83□□□□□ -1.8
DDX41-204ENST00000504807 KRTAP6-2Q3LI66 62 aa3.81□□□□□ -1.8
DDX41-204ENST00000504807 CDC42SE1Q9NRR8 79 aa3.81□□□□□ -1.8
DDX41-204ENST00000504807 ROMO1P60602 79 aa3.79□□□□□ -1.8
DDX41-204ENST00000504807 RPS28P62857 69 aaKnown RBP3.76□□□□□ -1.81
DDX41-204ENST00000504807 KRTAP5-1Q6L8H4 278 aa3.71□□□□□ -1.82
DDX41-204ENST00000504807 MT3P25713 68 aa3.57□□□□□ -1.84
DDX41-204ENST00000504807 BRK1Q8WUW1 75 aa3.37□□□□□ -1.87
DDX41-204ENST00000504807 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
DDX41-204ENST00000504807 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
DDX41-204ENST00000504807 KRTAP4-2Q9BYR5 136 aa3.24□□□□□ -1.89
DDX41-204ENST00000504807 SVIPQ8NHG7 77 aa3.23□□□□□ -1.89
DDX41-204ENST00000504807 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
DDX41-204ENST00000504807 PMAIP1Q13794 54 aa3.21□□□□□ -1.9
DDX41-204ENST00000504807 LCE1BQ5T7P3 118 aa3.21□□□□□ -1.9
DDX41-204ENST00000504807 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
DDX41-204ENST00000504807 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
DDX41-204ENST00000504807 PHGR1C9JFL3 82 aa3.07□□□□□ -1.92
DDX41-204ENST00000504807 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
DDX41-204ENST00000504807 PRAC1Q96KF2 57 aa2.98□□□□□ -1.93
DDX41-204ENST00000504807 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
DDX41-204ENST00000504807 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
DDX41-204ENST00000504807 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
DDX41-204ENST00000504807 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
DDX41-204ENST00000504807 KRTAP21-2Q3LI59 83 aa2.64□□□□□ -1.99
DDX41-204ENST00000504807 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
DDX41-204ENST00000504807 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
DDX41-204ENST00000504807 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
DDX41-204ENST00000504807 NDUFAF8A1L188 74 aa2.39□□□□□ -2.03
DDX41-204ENST00000504807 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
DDX41-204ENST00000504807 A0A0A0MQY5 61 aa2.22□□□□□ -2.05
DDX41-204ENST00000504807 H3BS24 57 aa2.21□□□□□ -2.06
DDX41-204ENST00000504807 INE1O15225 51 aa2.07□□□□□ -2.08
DDX41-204ENST00000504807 PRM1P04553 51 aa1.98□□□□□ -2.09
DDX41-204ENST00000504807 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 82.2 ms